Soil characteristics and abundance of archaea in samples from the Ross Sea Region, Antarctica, supplement to: Ayton, J; Aislabie, Jackie; Barker, Gary M; Saul, D; Turner, Simon (2010): Crenarchaeota affiliated with group 1.1b are prevalent in coastal mineral soils of the Ross Sea region of Antarctica. Environmental Microbiology, 12(3), 689-703
The objective of this study was to examine the presence and diversity of Archaea within mineral and ornithogenic soils from 12 locations across the Ross Sea region. Archaea were not abundant but DNA sufficient for producing 16S rRNA gene clone libraries was extracted from 18 of 51 soil samples, from...
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ftdatacite:10.1594/pangaea.807148 2023-05-15T13:56:05+02:00 Soil characteristics and abundance of archaea in samples from the Ross Sea Region, Antarctica, supplement to: Ayton, J; Aislabie, Jackie; Barker, Gary M; Saul, D; Turner, Simon (2010): Crenarchaeota affiliated with group 1.1b are prevalent in coastal mineral soils of the Ross Sea region of Antarctica. Environmental Microbiology, 12(3), 689-703 Ayton, J Aislabie, Jackie Barker, Gary M Saul, D Turner, Simon 2010 application/zip https://dx.doi.org/10.1594/pangaea.807148 https://doi.pangaea.de/10.1594/PANGAEA.807148 en eng PANGAEA - Data Publisher for Earth & Environmental Science https://dx.doi.org/10.1111/j.1462-2920.2009.02111.x Creative Commons Attribution 3.0 Unported https://creativecommons.org/licenses/by/3.0/legalcode cc-by-3.0 CC-BY International Polar Year 2007-2008 IPY Collection article Supplementary Collection of Datasets 2010 ftdatacite https://doi.org/10.1594/pangaea.807148 https://doi.org/10.1111/j.1462-2920.2009.02111.x 2021-11-05T12:55:41Z The objective of this study was to examine the presence and diversity of Archaea within mineral and ornithogenic soils from 12 locations across the Ross Sea region. Archaea were not abundant but DNA sufficient for producing 16S rRNA gene clone libraries was extracted from 18 of 51 soil samples, from four locations. A total of 1452 clones were analysed by restriction fragment length polymorphism and assigned to 43 operational taxonomic units from which representatives were sequenced. Archaea were primarily restricted to coastal mineral soils which showed a predominance of Crenarchaeota belonging to group 1.1b (>99% of clones). These clones were assigned to six clusters (A through F), based on shared identity to sequences in the GenBank database. Ordination indicated that soil chemistry and water content determined archaeal community structure. This is the first comprehensive study of the archaeal community in Antarctic soils and as such provides a reference point for further investigation of microbial function in this environment. : Data extracted in the frame of a joint ICSTI/PANGAEA IPY effort, see http://doi.pangaea.de/10.1594/PANGAEA.150150 Article in Journal/Newspaper Antarc* Antarctic Antarctica International Polar Year IPY Ross Sea DataCite Metadata Store (German National Library of Science and Technology) Antarctic Ross Sea |
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Open Polar |
collection |
DataCite Metadata Store (German National Library of Science and Technology) |
op_collection_id |
ftdatacite |
language |
English |
topic |
International Polar Year 2007-2008 IPY |
spellingShingle |
International Polar Year 2007-2008 IPY Ayton, J Aislabie, Jackie Barker, Gary M Saul, D Turner, Simon Soil characteristics and abundance of archaea in samples from the Ross Sea Region, Antarctica, supplement to: Ayton, J; Aislabie, Jackie; Barker, Gary M; Saul, D; Turner, Simon (2010): Crenarchaeota affiliated with group 1.1b are prevalent in coastal mineral soils of the Ross Sea region of Antarctica. Environmental Microbiology, 12(3), 689-703 |
topic_facet |
International Polar Year 2007-2008 IPY |
description |
The objective of this study was to examine the presence and diversity of Archaea within mineral and ornithogenic soils from 12 locations across the Ross Sea region. Archaea were not abundant but DNA sufficient for producing 16S rRNA gene clone libraries was extracted from 18 of 51 soil samples, from four locations. A total of 1452 clones were analysed by restriction fragment length polymorphism and assigned to 43 operational taxonomic units from which representatives were sequenced. Archaea were primarily restricted to coastal mineral soils which showed a predominance of Crenarchaeota belonging to group 1.1b (>99% of clones). These clones were assigned to six clusters (A through F), based on shared identity to sequences in the GenBank database. Ordination indicated that soil chemistry and water content determined archaeal community structure. This is the first comprehensive study of the archaeal community in Antarctic soils and as such provides a reference point for further investigation of microbial function in this environment. : Data extracted in the frame of a joint ICSTI/PANGAEA IPY effort, see http://doi.pangaea.de/10.1594/PANGAEA.150150 |
format |
Article in Journal/Newspaper |
author |
Ayton, J Aislabie, Jackie Barker, Gary M Saul, D Turner, Simon |
author_facet |
Ayton, J Aislabie, Jackie Barker, Gary M Saul, D Turner, Simon |
author_sort |
Ayton, J |
title |
Soil characteristics and abundance of archaea in samples from the Ross Sea Region, Antarctica, supplement to: Ayton, J; Aislabie, Jackie; Barker, Gary M; Saul, D; Turner, Simon (2010): Crenarchaeota affiliated with group 1.1b are prevalent in coastal mineral soils of the Ross Sea region of Antarctica. Environmental Microbiology, 12(3), 689-703 |
title_short |
Soil characteristics and abundance of archaea in samples from the Ross Sea Region, Antarctica, supplement to: Ayton, J; Aislabie, Jackie; Barker, Gary M; Saul, D; Turner, Simon (2010): Crenarchaeota affiliated with group 1.1b are prevalent in coastal mineral soils of the Ross Sea region of Antarctica. Environmental Microbiology, 12(3), 689-703 |
title_full |
Soil characteristics and abundance of archaea in samples from the Ross Sea Region, Antarctica, supplement to: Ayton, J; Aislabie, Jackie; Barker, Gary M; Saul, D; Turner, Simon (2010): Crenarchaeota affiliated with group 1.1b are prevalent in coastal mineral soils of the Ross Sea region of Antarctica. Environmental Microbiology, 12(3), 689-703 |
title_fullStr |
Soil characteristics and abundance of archaea in samples from the Ross Sea Region, Antarctica, supplement to: Ayton, J; Aislabie, Jackie; Barker, Gary M; Saul, D; Turner, Simon (2010): Crenarchaeota affiliated with group 1.1b are prevalent in coastal mineral soils of the Ross Sea region of Antarctica. Environmental Microbiology, 12(3), 689-703 |
title_full_unstemmed |
Soil characteristics and abundance of archaea in samples from the Ross Sea Region, Antarctica, supplement to: Ayton, J; Aislabie, Jackie; Barker, Gary M; Saul, D; Turner, Simon (2010): Crenarchaeota affiliated with group 1.1b are prevalent in coastal mineral soils of the Ross Sea region of Antarctica. Environmental Microbiology, 12(3), 689-703 |
title_sort |
soil characteristics and abundance of archaea in samples from the ross sea region, antarctica, supplement to: ayton, j; aislabie, jackie; barker, gary m; saul, d; turner, simon (2010): crenarchaeota affiliated with group 1.1b are prevalent in coastal mineral soils of the ross sea region of antarctica. environmental microbiology, 12(3), 689-703 |
publisher |
PANGAEA - Data Publisher for Earth & Environmental Science |
publishDate |
2010 |
url |
https://dx.doi.org/10.1594/pangaea.807148 https://doi.pangaea.de/10.1594/PANGAEA.807148 |
geographic |
Antarctic Ross Sea |
geographic_facet |
Antarctic Ross Sea |
genre |
Antarc* Antarctic Antarctica International Polar Year IPY Ross Sea |
genre_facet |
Antarc* Antarctic Antarctica International Polar Year IPY Ross Sea |
op_relation |
https://dx.doi.org/10.1111/j.1462-2920.2009.02111.x |
op_rights |
Creative Commons Attribution 3.0 Unported https://creativecommons.org/licenses/by/3.0/legalcode cc-by-3.0 |
op_rightsnorm |
CC-BY |
op_doi |
https://doi.org/10.1594/pangaea.807148 https://doi.org/10.1111/j.1462-2920.2009.02111.x |
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1766263316028588032 |