Seawater carbonate chemistry and combined mechanistic effects of CO2 and light on the N2-fixing cyanobacterium Trichodesmium IMS101, 2010, supplement to: Levitan, Orly; Kranz, Sven A; Spungin, D; Prasil, O; Rost, Bjoern; Beran-Frank, Ilana (2010): Combined effects of CO2 and light on the N2-fixing cyanobacterium Trichodesmium IMS101: A mechanistic view. Plant Physiology, 154, 346-356

The marine diazotrophic cyanobacterium Trichodesmium responds to elevated atmospheric CO2 partial pressure (pCO2) with higher N2 fixation and growth rates. To unveil the underlying mechanisms, we examined the combined influence of pCO2(150 and 900 µatm) and light (50 and 200 µmol photons m-2 s-1) on...

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Main Authors: Levitan, Orly, Kranz, Sven A, Spungin, D, Prasil, O, Rost, Bjoern, Beran-Frank, Ilana
Format: Dataset
Language:English
Published: PANGAEA - Data Publisher for Earth & Environmental Science 2010
Subjects:
pH
Online Access:https://dx.doi.org/10.1594/pangaea.777431
https://doi.pangaea.de/10.1594/PANGAEA.777431
id ftdatacite:10.1594/pangaea.777431
record_format openpolar
institution Open Polar
collection DataCite Metadata Store (German National Library of Science and Technology)
op_collection_id ftdatacite
language English
topic Bacteria
Bottles or small containers/Aquaria <20 L
Cyanobacteria
Laboratory experiment
Laboratory strains
Light
Not applicable
Other metabolic rates
Pelagos
Phytoplankton
Primary production/Photosynthesis
Single species
Trichodesmium sp.
Comment
Time in hours
Radiation, photosynthetically active
Experimental treatment
Photosynthetic protein PsbA
Photosynthetic protein PsbA standard deviation
Photosynthetic protein PsbC
Photosynthetic protein PsbC standard deviation
Photosynthetic protein Rubisco
Photosynthetic protein Rubisco, standard deviation
CF1 subunit of ATP synthase protein
CF1 subunit of ATP synthase protein, standard deviation
Iron protein of nitrogenase
Iron protein of nitrogenase, standard deviation
GlnA subunit of Gln synthetase
GlnA subunit of Gln synthetase, standard deviation
Fluorescence, intrinsic
Fluorescence, intrinsic, standard deviation
Fluorescence, maximum
Fluorescence, maximum, standard deviation
Fluorescence, variable
Fluorescence, variable, standard deviation
Maximum photochemical quantum yield of photosystem II
Maximum photochemical quantum yield of photosystem II, standard deviation
Effective absorbance cross-section of photosystem II
Effective absorbance cross-section of photosystem II, standard deviation
Open photosystem II reaction centers
Open photosystem II reaction centers, standard deviation
Electron transport rate of photosystem II per cell
Electron transport rate of photosystem II, standard deviation
Carbonate system computation flag
Salinity
Temperature, water
pH
Carbon dioxide
Partial pressure of carbon dioxide water at sea surface temperature wet air
Fugacity of carbon dioxide water at sea surface temperature wet air
Bicarbonate ion
Carbonate ion
Alkalinity, total
Carbon, inorganic, dissolved
Aragonite saturation state
Calcite saturation state
see references
Calculated using seacarb after Nisumaa et al. 2010
Alkalinity, Gran titration Gran, 1950
Calculated using CO2SYS
European network of excellence for Ocean Ecosystems Analysis EUR-OCEANS
European Project on Ocean Acidification EPOCA
Ocean Acidification International Coordination Centre OA-ICC
spellingShingle Bacteria
Bottles or small containers/Aquaria <20 L
Cyanobacteria
Laboratory experiment
Laboratory strains
Light
Not applicable
Other metabolic rates
Pelagos
Phytoplankton
Primary production/Photosynthesis
Single species
Trichodesmium sp.
Comment
Time in hours
Radiation, photosynthetically active
Experimental treatment
Photosynthetic protein PsbA
Photosynthetic protein PsbA standard deviation
Photosynthetic protein PsbC
Photosynthetic protein PsbC standard deviation
Photosynthetic protein Rubisco
Photosynthetic protein Rubisco, standard deviation
CF1 subunit of ATP synthase protein
CF1 subunit of ATP synthase protein, standard deviation
Iron protein of nitrogenase
Iron protein of nitrogenase, standard deviation
GlnA subunit of Gln synthetase
GlnA subunit of Gln synthetase, standard deviation
Fluorescence, intrinsic
Fluorescence, intrinsic, standard deviation
Fluorescence, maximum
Fluorescence, maximum, standard deviation
Fluorescence, variable
Fluorescence, variable, standard deviation
Maximum photochemical quantum yield of photosystem II
Maximum photochemical quantum yield of photosystem II, standard deviation
Effective absorbance cross-section of photosystem II
Effective absorbance cross-section of photosystem II, standard deviation
Open photosystem II reaction centers
Open photosystem II reaction centers, standard deviation
Electron transport rate of photosystem II per cell
Electron transport rate of photosystem II, standard deviation
Carbonate system computation flag
Salinity
Temperature, water
pH
Carbon dioxide
Partial pressure of carbon dioxide water at sea surface temperature wet air
Fugacity of carbon dioxide water at sea surface temperature wet air
Bicarbonate ion
Carbonate ion
Alkalinity, total
Carbon, inorganic, dissolved
Aragonite saturation state
Calcite saturation state
see references
Calculated using seacarb after Nisumaa et al. 2010
Alkalinity, Gran titration Gran, 1950
Calculated using CO2SYS
European network of excellence for Ocean Ecosystems Analysis EUR-OCEANS
European Project on Ocean Acidification EPOCA
Ocean Acidification International Coordination Centre OA-ICC
Levitan, Orly
Kranz, Sven A
Spungin, D
Prasil, O
Rost, Bjoern
Beran-Frank, Ilana
Seawater carbonate chemistry and combined mechanistic effects of CO2 and light on the N2-fixing cyanobacterium Trichodesmium IMS101, 2010, supplement to: Levitan, Orly; Kranz, Sven A; Spungin, D; Prasil, O; Rost, Bjoern; Beran-Frank, Ilana (2010): Combined effects of CO2 and light on the N2-fixing cyanobacterium Trichodesmium IMS101: A mechanistic view. Plant Physiology, 154, 346-356
topic_facet Bacteria
Bottles or small containers/Aquaria <20 L
Cyanobacteria
Laboratory experiment
Laboratory strains
Light
Not applicable
Other metabolic rates
Pelagos
Phytoplankton
Primary production/Photosynthesis
Single species
Trichodesmium sp.
Comment
Time in hours
Radiation, photosynthetically active
Experimental treatment
Photosynthetic protein PsbA
Photosynthetic protein PsbA standard deviation
Photosynthetic protein PsbC
Photosynthetic protein PsbC standard deviation
Photosynthetic protein Rubisco
Photosynthetic protein Rubisco, standard deviation
CF1 subunit of ATP synthase protein
CF1 subunit of ATP synthase protein, standard deviation
Iron protein of nitrogenase
Iron protein of nitrogenase, standard deviation
GlnA subunit of Gln synthetase
GlnA subunit of Gln synthetase, standard deviation
Fluorescence, intrinsic
Fluorescence, intrinsic, standard deviation
Fluorescence, maximum
Fluorescence, maximum, standard deviation
Fluorescence, variable
Fluorescence, variable, standard deviation
Maximum photochemical quantum yield of photosystem II
Maximum photochemical quantum yield of photosystem II, standard deviation
Effective absorbance cross-section of photosystem II
Effective absorbance cross-section of photosystem II, standard deviation
Open photosystem II reaction centers
Open photosystem II reaction centers, standard deviation
Electron transport rate of photosystem II per cell
Electron transport rate of photosystem II, standard deviation
Carbonate system computation flag
Salinity
Temperature, water
pH
Carbon dioxide
Partial pressure of carbon dioxide water at sea surface temperature wet air
Fugacity of carbon dioxide water at sea surface temperature wet air
Bicarbonate ion
Carbonate ion
Alkalinity, total
Carbon, inorganic, dissolved
Aragonite saturation state
Calcite saturation state
see references
Calculated using seacarb after Nisumaa et al. 2010
Alkalinity, Gran titration Gran, 1950
Calculated using CO2SYS
European network of excellence for Ocean Ecosystems Analysis EUR-OCEANS
European Project on Ocean Acidification EPOCA
Ocean Acidification International Coordination Centre OA-ICC
description The marine diazotrophic cyanobacterium Trichodesmium responds to elevated atmospheric CO2 partial pressure (pCO2) with higher N2 fixation and growth rates. To unveil the underlying mechanisms, we examined the combined influence of pCO2(150 and 900 µatm) and light (50 and 200 µmol photons m-2 s-1) on TrichodesmiumIMS101. We expand on a complementary study that demonstrated that while elevated pCO2 enhanced N2 fixation and growth, oxygen evolution and carbon fixation increased mainly as a response to high light. Here, we investigated changes in the photosynthetic fluorescence parameters of photosystem II, in ratios of the photosynthetic units (photosystem I:photosystem II), and in the pool sizes of key proteins involved in the fixation of carbon and nitrogen as well as their subsequent assimilation. We show that the combined elevation in pCO2 and light controlled the operation of the CO2-concentrating mechanism and enhanced protein activity without increasing their pool size. Moreover, elevated pCO2 and high light decreased the amounts of several key proteins (NifH, PsbA, and PsaC), while amounts of AtpB and RbcL did not significantly change. Reduced investment in protein biosynthesis, without notably changing photosynthetic fluxes, could free up energy that can be reallocated to increase N2 fixation and growth at elevated pCO2 and light. We suggest that changes in the redox state of the photosynthetic electron transportchain and posttranslational regulation of key proteins mediate the high flexibility in resources and energy allocation in Trichodesmium. This strategy should enableTrichodesmium to flourish in future surface oceans characterized by elevated pCO2, higher temperatures, and high light. : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne and Gattuso, 2011) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI).
format Dataset
author Levitan, Orly
Kranz, Sven A
Spungin, D
Prasil, O
Rost, Bjoern
Beran-Frank, Ilana
author_facet Levitan, Orly
Kranz, Sven A
Spungin, D
Prasil, O
Rost, Bjoern
Beran-Frank, Ilana
author_sort Levitan, Orly
title Seawater carbonate chemistry and combined mechanistic effects of CO2 and light on the N2-fixing cyanobacterium Trichodesmium IMS101, 2010, supplement to: Levitan, Orly; Kranz, Sven A; Spungin, D; Prasil, O; Rost, Bjoern; Beran-Frank, Ilana (2010): Combined effects of CO2 and light on the N2-fixing cyanobacterium Trichodesmium IMS101: A mechanistic view. Plant Physiology, 154, 346-356
title_short Seawater carbonate chemistry and combined mechanistic effects of CO2 and light on the N2-fixing cyanobacterium Trichodesmium IMS101, 2010, supplement to: Levitan, Orly; Kranz, Sven A; Spungin, D; Prasil, O; Rost, Bjoern; Beran-Frank, Ilana (2010): Combined effects of CO2 and light on the N2-fixing cyanobacterium Trichodesmium IMS101: A mechanistic view. Plant Physiology, 154, 346-356
title_full Seawater carbonate chemistry and combined mechanistic effects of CO2 and light on the N2-fixing cyanobacterium Trichodesmium IMS101, 2010, supplement to: Levitan, Orly; Kranz, Sven A; Spungin, D; Prasil, O; Rost, Bjoern; Beran-Frank, Ilana (2010): Combined effects of CO2 and light on the N2-fixing cyanobacterium Trichodesmium IMS101: A mechanistic view. Plant Physiology, 154, 346-356
title_fullStr Seawater carbonate chemistry and combined mechanistic effects of CO2 and light on the N2-fixing cyanobacterium Trichodesmium IMS101, 2010, supplement to: Levitan, Orly; Kranz, Sven A; Spungin, D; Prasil, O; Rost, Bjoern; Beran-Frank, Ilana (2010): Combined effects of CO2 and light on the N2-fixing cyanobacterium Trichodesmium IMS101: A mechanistic view. Plant Physiology, 154, 346-356
title_full_unstemmed Seawater carbonate chemistry and combined mechanistic effects of CO2 and light on the N2-fixing cyanobacterium Trichodesmium IMS101, 2010, supplement to: Levitan, Orly; Kranz, Sven A; Spungin, D; Prasil, O; Rost, Bjoern; Beran-Frank, Ilana (2010): Combined effects of CO2 and light on the N2-fixing cyanobacterium Trichodesmium IMS101: A mechanistic view. Plant Physiology, 154, 346-356
title_sort seawater carbonate chemistry and combined mechanistic effects of co2 and light on the n2-fixing cyanobacterium trichodesmium ims101, 2010, supplement to: levitan, orly; kranz, sven a; spungin, d; prasil, o; rost, bjoern; beran-frank, ilana (2010): combined effects of co2 and light on the n2-fixing cyanobacterium trichodesmium ims101: a mechanistic view. plant physiology, 154, 346-356
publisher PANGAEA - Data Publisher for Earth & Environmental Science
publishDate 2010
url https://dx.doi.org/10.1594/pangaea.777431
https://doi.pangaea.de/10.1594/PANGAEA.777431
long_lat ENVELOPE(-60.200,-60.200,-63.733,-63.733)
geographic Sven
geographic_facet Sven
genre Ocean acidification
genre_facet Ocean acidification
op_relation https://dx.doi.org/10.1104/pp.110.159285
op_rights Creative Commons Attribution 3.0 Unported
https://creativecommons.org/licenses/by/3.0/legalcode
cc-by-3.0
op_rightsnorm CC-BY
op_doi https://doi.org/10.1594/pangaea.777431
https://doi.org/10.1104/pp.110.159285
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spelling ftdatacite:10.1594/pangaea.777431 2023-05-15T17:51:12+02:00 Seawater carbonate chemistry and combined mechanistic effects of CO2 and light on the N2-fixing cyanobacterium Trichodesmium IMS101, 2010, supplement to: Levitan, Orly; Kranz, Sven A; Spungin, D; Prasil, O; Rost, Bjoern; Beran-Frank, Ilana (2010): Combined effects of CO2 and light on the N2-fixing cyanobacterium Trichodesmium IMS101: A mechanistic view. Plant Physiology, 154, 346-356 Levitan, Orly Kranz, Sven A Spungin, D Prasil, O Rost, Bjoern Beran-Frank, Ilana 2010 text/tab-separated-values https://dx.doi.org/10.1594/pangaea.777431 https://doi.pangaea.de/10.1594/PANGAEA.777431 en eng PANGAEA - Data Publisher for Earth & Environmental Science https://dx.doi.org/10.1104/pp.110.159285 Creative Commons Attribution 3.0 Unported https://creativecommons.org/licenses/by/3.0/legalcode cc-by-3.0 CC-BY Bacteria Bottles or small containers/Aquaria <20 L Cyanobacteria Laboratory experiment Laboratory strains Light Not applicable Other metabolic rates Pelagos Phytoplankton Primary production/Photosynthesis Single species Trichodesmium sp. Comment Time in hours Radiation, photosynthetically active Experimental treatment Photosynthetic protein PsbA Photosynthetic protein PsbA standard deviation Photosynthetic protein PsbC Photosynthetic protein PsbC standard deviation Photosynthetic protein Rubisco Photosynthetic protein Rubisco, standard deviation CF1 subunit of ATP synthase protein CF1 subunit of ATP synthase protein, standard deviation Iron protein of nitrogenase Iron protein of nitrogenase, standard deviation GlnA subunit of Gln synthetase GlnA subunit of Gln synthetase, standard deviation Fluorescence, intrinsic Fluorescence, intrinsic, standard deviation Fluorescence, maximum Fluorescence, maximum, standard deviation Fluorescence, variable Fluorescence, variable, standard deviation Maximum photochemical quantum yield of photosystem II Maximum photochemical quantum yield of photosystem II, standard deviation Effective absorbance cross-section of photosystem II Effective absorbance cross-section of photosystem II, standard deviation Open photosystem II reaction centers Open photosystem II reaction centers, standard deviation Electron transport rate of photosystem II per cell Electron transport rate of photosystem II, standard deviation Carbonate system computation flag Salinity Temperature, water pH Carbon dioxide Partial pressure of carbon dioxide water at sea surface temperature wet air Fugacity of carbon dioxide water at sea surface temperature wet air Bicarbonate ion Carbonate ion Alkalinity, total Carbon, inorganic, dissolved Aragonite saturation state Calcite saturation state see references Calculated using seacarb after Nisumaa et al. 2010 Alkalinity, Gran titration Gran, 1950 Calculated using CO2SYS European network of excellence for Ocean Ecosystems Analysis EUR-OCEANS European Project on Ocean Acidification EPOCA Ocean Acidification International Coordination Centre OA-ICC Dataset dataset Supplementary Dataset 2010 ftdatacite https://doi.org/10.1594/pangaea.777431 https://doi.org/10.1104/pp.110.159285 2022-02-09T12:06:19Z The marine diazotrophic cyanobacterium Trichodesmium responds to elevated atmospheric CO2 partial pressure (pCO2) with higher N2 fixation and growth rates. To unveil the underlying mechanisms, we examined the combined influence of pCO2(150 and 900 µatm) and light (50 and 200 µmol photons m-2 s-1) on TrichodesmiumIMS101. We expand on a complementary study that demonstrated that while elevated pCO2 enhanced N2 fixation and growth, oxygen evolution and carbon fixation increased mainly as a response to high light. Here, we investigated changes in the photosynthetic fluorescence parameters of photosystem II, in ratios of the photosynthetic units (photosystem I:photosystem II), and in the pool sizes of key proteins involved in the fixation of carbon and nitrogen as well as their subsequent assimilation. We show that the combined elevation in pCO2 and light controlled the operation of the CO2-concentrating mechanism and enhanced protein activity without increasing their pool size. Moreover, elevated pCO2 and high light decreased the amounts of several key proteins (NifH, PsbA, and PsaC), while amounts of AtpB and RbcL did not significantly change. Reduced investment in protein biosynthesis, without notably changing photosynthetic fluxes, could free up energy that can be reallocated to increase N2 fixation and growth at elevated pCO2 and light. We suggest that changes in the redox state of the photosynthetic electron transportchain and posttranslational regulation of key proteins mediate the high flexibility in resources and energy allocation in Trichodesmium. This strategy should enableTrichodesmium to flourish in future surface oceans characterized by elevated pCO2, higher temperatures, and high light. : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne and Gattuso, 2011) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). Dataset Ocean acidification DataCite Metadata Store (German National Library of Science and Technology) Sven ENVELOPE(-60.200,-60.200,-63.733,-63.733)