Seawater carbonate chemistry, mass, length and gene expression of Sepia officinalis during experiments, 2011, supplement to: Hu, Marian Y; Tseng, Yung-Che; Stumpp, Meike; Gutowska, Magdalena A; Kiko, Rainer; Lucassen, Magnus; Melzner, Frank (2011): Elevated seawater pCO2 differentially affects branchial acid-base transporters over the course of development in the cephalopod Sepia officinalis. American Journal of Physiology, 300(5), R1100-R1114

The specific transporters involved in maintenance of blood pH homeostasis in cephalopod molluscs have not been identified to date. Using in situ hybridization and immuno histochemical methods, we demonstrate that Na+/K+-ATPase (soNKA), a V-type H+-ATPase (soV-HA), and Na+/HCO3- cotransporter (soNBC)...

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Bibliographic Details
Main Authors: Hu, Marian Y, Tseng, Yung-Che, Stumpp, Meike, Gutowska, Magdalena A, Kiko, Rainer, Lucassen, Magnus, Melzner, Frank
Format: Dataset
Language:English
Published: PANGAEA - Data Publisher for Earth & Environmental Science 2011
Subjects:
pH
Online Access:https://dx.doi.org/10.1594/pangaea.774787
https://doi.pangaea.de/10.1594/PANGAEA.774787
id ftdatacite:10.1594/pangaea.774787
record_format openpolar
institution Open Polar
collection DataCite Metadata Store (German National Library of Science and Technology)
op_collection_id ftdatacite
language English
topic Acid-base regulation
Animalia
Benthic animals
Benthos
Coast and continental shelf
Containers and aquaria 20-1000 L or < 1 m**2
Gene expression incl. proteomics
Growth/Morphology
Laboratory experiment
Mollusca
North Atlantic
Sepia officinalis
Single species
Temperate
Species
Comment
Experimental treatment
Experiment day
Salinity
Salinity, standard deviation
Temperature, water
Temperature, standard deviation
pH
pH, standard deviation
Aragonite saturation state
Aragonite saturation state, standard deviation
Carbon dioxide, partial pressure
Carbon dioxide, partial pressure, standard deviation
Alkalinity, total
Alkalinity, total, standard deviation
Sepia officinalis, mass
Sepia officinalis, mass, standard deviation
Sepia officinalis, length, mantle
Sepia officinalis, length, mantle, standard deviation
Sodium/Potassium adenosine triphosphatase gene expression
Sodium/Potassium adenosine triphosphatase gene expression, standard deviation
Sodium/bicarbonate cotransporter gene expression
Sodium/bicarbonate cotransporter gene expression, standard deviation
Sodium driven chlorine/bicarbonate exchanger gene expression
Sodium driven chlorine/bicarbonate exchanger gene expression, standard deviation
Carbonic anhydrase gene expression
Carbonic anhydrase gene expression, standard deviation
Adenosine triphosphate synthase gene expression
Adenosine triphosphate synthase gene expression, standard deviation
Cytochrome P-450 gene expression
Cytochrome P-450 gene expression, standard deviation
Cytochrome-c-oxydase gene expression
Cytochrome-c-oxydase gene expression, standard deviation
Octopine dehydrogenase gene expression
Octopine dehydrogenase gene expression, standard deviation
Sodium/Potassium adenosine triphosphatase maximum
Sodium/Potassium adenosine triphosphatase maximum, standard deviation
Sodium/Potassium adenosine triphosphatase relative protein concentration
Sodium/Potassium adenosine triphosphatase relative protein concentration, standard deviation
Sodium/Potassium adenosine triphosphatase relative mRNA expression
Sodium/Potassium adenosine triphosphatase relative mRNA expression, standard deviation
Sepia officinalis, perivitelline fluid, pH
Sepia officinalis, perivitelline fluid, pCO2
Gene name
Sepia officinalis, mRNA gene expression
Sepia officinalis, mRNA gene expression, standard deviation
Sepia officinalis, mRNA gene expression change
Carbonate system computation flag
Carbon dioxide
Partial pressure of carbon dioxide water at sea surface temperature wet air
Fugacity of carbon dioxide water at sea surface temperature wet air
Bicarbonate ion
Carbonate ion
Carbon, inorganic, dissolved
Calcite saturation state
WTW 340i pH-analyzer and WTW SenTix 81-electrode
Calculated using CO2SYS
Potentiometric open-cell titration
Precision scale Sartorius TE64, Sartorius AG, Germany
Stereomicroscopy Leica
see references
Calculated using seacarb after Nisumaa et al. 2010
Biological Impacts of Ocean Acidification BIOACID
European network of excellence for Ocean Ecosystems Analysis EUR-OCEANS
European Project on Ocean Acidification EPOCA
Ocean Acidification International Coordination Centre OA-ICC
spellingShingle Acid-base regulation
Animalia
Benthic animals
Benthos
Coast and continental shelf
Containers and aquaria 20-1000 L or < 1 m**2
Gene expression incl. proteomics
Growth/Morphology
Laboratory experiment
Mollusca
North Atlantic
Sepia officinalis
Single species
Temperate
Species
Comment
Experimental treatment
Experiment day
Salinity
Salinity, standard deviation
Temperature, water
Temperature, standard deviation
pH
pH, standard deviation
Aragonite saturation state
Aragonite saturation state, standard deviation
Carbon dioxide, partial pressure
Carbon dioxide, partial pressure, standard deviation
Alkalinity, total
Alkalinity, total, standard deviation
Sepia officinalis, mass
Sepia officinalis, mass, standard deviation
Sepia officinalis, length, mantle
Sepia officinalis, length, mantle, standard deviation
Sodium/Potassium adenosine triphosphatase gene expression
Sodium/Potassium adenosine triphosphatase gene expression, standard deviation
Sodium/bicarbonate cotransporter gene expression
Sodium/bicarbonate cotransporter gene expression, standard deviation
Sodium driven chlorine/bicarbonate exchanger gene expression
Sodium driven chlorine/bicarbonate exchanger gene expression, standard deviation
Carbonic anhydrase gene expression
Carbonic anhydrase gene expression, standard deviation
Adenosine triphosphate synthase gene expression
Adenosine triphosphate synthase gene expression, standard deviation
Cytochrome P-450 gene expression
Cytochrome P-450 gene expression, standard deviation
Cytochrome-c-oxydase gene expression
Cytochrome-c-oxydase gene expression, standard deviation
Octopine dehydrogenase gene expression
Octopine dehydrogenase gene expression, standard deviation
Sodium/Potassium adenosine triphosphatase maximum
Sodium/Potassium adenosine triphosphatase maximum, standard deviation
Sodium/Potassium adenosine triphosphatase relative protein concentration
Sodium/Potassium adenosine triphosphatase relative protein concentration, standard deviation
Sodium/Potassium adenosine triphosphatase relative mRNA expression
Sodium/Potassium adenosine triphosphatase relative mRNA expression, standard deviation
Sepia officinalis, perivitelline fluid, pH
Sepia officinalis, perivitelline fluid, pCO2
Gene name
Sepia officinalis, mRNA gene expression
Sepia officinalis, mRNA gene expression, standard deviation
Sepia officinalis, mRNA gene expression change
Carbonate system computation flag
Carbon dioxide
Partial pressure of carbon dioxide water at sea surface temperature wet air
Fugacity of carbon dioxide water at sea surface temperature wet air
Bicarbonate ion
Carbonate ion
Carbon, inorganic, dissolved
Calcite saturation state
WTW 340i pH-analyzer and WTW SenTix 81-electrode
Calculated using CO2SYS
Potentiometric open-cell titration
Precision scale Sartorius TE64, Sartorius AG, Germany
Stereomicroscopy Leica
see references
Calculated using seacarb after Nisumaa et al. 2010
Biological Impacts of Ocean Acidification BIOACID
European network of excellence for Ocean Ecosystems Analysis EUR-OCEANS
European Project on Ocean Acidification EPOCA
Ocean Acidification International Coordination Centre OA-ICC
Hu, Marian Y
Tseng, Yung-Che
Stumpp, Meike
Gutowska, Magdalena A
Kiko, Rainer
Lucassen, Magnus
Melzner, Frank
Seawater carbonate chemistry, mass, length and gene expression of Sepia officinalis during experiments, 2011, supplement to: Hu, Marian Y; Tseng, Yung-Che; Stumpp, Meike; Gutowska, Magdalena A; Kiko, Rainer; Lucassen, Magnus; Melzner, Frank (2011): Elevated seawater pCO2 differentially affects branchial acid-base transporters over the course of development in the cephalopod Sepia officinalis. American Journal of Physiology, 300(5), R1100-R1114
topic_facet Acid-base regulation
Animalia
Benthic animals
Benthos
Coast and continental shelf
Containers and aquaria 20-1000 L or < 1 m**2
Gene expression incl. proteomics
Growth/Morphology
Laboratory experiment
Mollusca
North Atlantic
Sepia officinalis
Single species
Temperate
Species
Comment
Experimental treatment
Experiment day
Salinity
Salinity, standard deviation
Temperature, water
Temperature, standard deviation
pH
pH, standard deviation
Aragonite saturation state
Aragonite saturation state, standard deviation
Carbon dioxide, partial pressure
Carbon dioxide, partial pressure, standard deviation
Alkalinity, total
Alkalinity, total, standard deviation
Sepia officinalis, mass
Sepia officinalis, mass, standard deviation
Sepia officinalis, length, mantle
Sepia officinalis, length, mantle, standard deviation
Sodium/Potassium adenosine triphosphatase gene expression
Sodium/Potassium adenosine triphosphatase gene expression, standard deviation
Sodium/bicarbonate cotransporter gene expression
Sodium/bicarbonate cotransporter gene expression, standard deviation
Sodium driven chlorine/bicarbonate exchanger gene expression
Sodium driven chlorine/bicarbonate exchanger gene expression, standard deviation
Carbonic anhydrase gene expression
Carbonic anhydrase gene expression, standard deviation
Adenosine triphosphate synthase gene expression
Adenosine triphosphate synthase gene expression, standard deviation
Cytochrome P-450 gene expression
Cytochrome P-450 gene expression, standard deviation
Cytochrome-c-oxydase gene expression
Cytochrome-c-oxydase gene expression, standard deviation
Octopine dehydrogenase gene expression
Octopine dehydrogenase gene expression, standard deviation
Sodium/Potassium adenosine triphosphatase maximum
Sodium/Potassium adenosine triphosphatase maximum, standard deviation
Sodium/Potassium adenosine triphosphatase relative protein concentration
Sodium/Potassium adenosine triphosphatase relative protein concentration, standard deviation
Sodium/Potassium adenosine triphosphatase relative mRNA expression
Sodium/Potassium adenosine triphosphatase relative mRNA expression, standard deviation
Sepia officinalis, perivitelline fluid, pH
Sepia officinalis, perivitelline fluid, pCO2
Gene name
Sepia officinalis, mRNA gene expression
Sepia officinalis, mRNA gene expression, standard deviation
Sepia officinalis, mRNA gene expression change
Carbonate system computation flag
Carbon dioxide
Partial pressure of carbon dioxide water at sea surface temperature wet air
Fugacity of carbon dioxide water at sea surface temperature wet air
Bicarbonate ion
Carbonate ion
Carbon, inorganic, dissolved
Calcite saturation state
WTW 340i pH-analyzer and WTW SenTix 81-electrode
Calculated using CO2SYS
Potentiometric open-cell titration
Precision scale Sartorius TE64, Sartorius AG, Germany
Stereomicroscopy Leica
see references
Calculated using seacarb after Nisumaa et al. 2010
Biological Impacts of Ocean Acidification BIOACID
European network of excellence for Ocean Ecosystems Analysis EUR-OCEANS
European Project on Ocean Acidification EPOCA
Ocean Acidification International Coordination Centre OA-ICC
description The specific transporters involved in maintenance of blood pH homeostasis in cephalopod molluscs have not been identified to date. Using in situ hybridization and immuno histochemical methods, we demonstrate that Na+/K+-ATPase (soNKA), a V-type H+-ATPase (soV-HA), and Na+/HCO3- cotransporter (soNBC) are co-localized in NKA-rich cells in the gills of Sepia officinalis. mRNA expression patterns of these transporters and selected metabolic genes were examined in response to moderately elevated seawater pCO2 (0.16 and 0.35 kPa) over a time-course of six weeks in different ontogenetic stages. The applied CO2 concentrations are relevant for ocean acidification scenarios projected for the coming decades. We determined strong expression changes in late stage embryos and hatchlings, with one to three log2-fold reductions in soNKA, soNBCe, socCAII and COX. In contrast, no hypercapnia induced changes in mRNA expression were observed in juveniles during both short- and long-term exposure. However a transiently increased demand of ion regulatory demand was evident during the initial acclimation reaction to elevated seawater pCO2. Gill Na+/K+-ATPase activity and protein concentration were increased by approximately 15% in during short (2-11 day), but not long term (42 day) exposure. Our findings support the hypothesis that the energy budget of adult cephalopods is not significantly compromised during long-term exposure to moderate environmental hypercapnia. However, the down regulation of ion-regulatory and metabolic genes in late stage embryos, taken together with a significant reduction in somatic growth, indicates that cephalopod early life stages are challenged by elevated seawater pCO2. : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne and Gattuso, 2011) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI).
format Dataset
author Hu, Marian Y
Tseng, Yung-Che
Stumpp, Meike
Gutowska, Magdalena A
Kiko, Rainer
Lucassen, Magnus
Melzner, Frank
author_facet Hu, Marian Y
Tseng, Yung-Che
Stumpp, Meike
Gutowska, Magdalena A
Kiko, Rainer
Lucassen, Magnus
Melzner, Frank
author_sort Hu, Marian Y
title Seawater carbonate chemistry, mass, length and gene expression of Sepia officinalis during experiments, 2011, supplement to: Hu, Marian Y; Tseng, Yung-Che; Stumpp, Meike; Gutowska, Magdalena A; Kiko, Rainer; Lucassen, Magnus; Melzner, Frank (2011): Elevated seawater pCO2 differentially affects branchial acid-base transporters over the course of development in the cephalopod Sepia officinalis. American Journal of Physiology, 300(5), R1100-R1114
title_short Seawater carbonate chemistry, mass, length and gene expression of Sepia officinalis during experiments, 2011, supplement to: Hu, Marian Y; Tseng, Yung-Che; Stumpp, Meike; Gutowska, Magdalena A; Kiko, Rainer; Lucassen, Magnus; Melzner, Frank (2011): Elevated seawater pCO2 differentially affects branchial acid-base transporters over the course of development in the cephalopod Sepia officinalis. American Journal of Physiology, 300(5), R1100-R1114
title_full Seawater carbonate chemistry, mass, length and gene expression of Sepia officinalis during experiments, 2011, supplement to: Hu, Marian Y; Tseng, Yung-Che; Stumpp, Meike; Gutowska, Magdalena A; Kiko, Rainer; Lucassen, Magnus; Melzner, Frank (2011): Elevated seawater pCO2 differentially affects branchial acid-base transporters over the course of development in the cephalopod Sepia officinalis. American Journal of Physiology, 300(5), R1100-R1114
title_fullStr Seawater carbonate chemistry, mass, length and gene expression of Sepia officinalis during experiments, 2011, supplement to: Hu, Marian Y; Tseng, Yung-Che; Stumpp, Meike; Gutowska, Magdalena A; Kiko, Rainer; Lucassen, Magnus; Melzner, Frank (2011): Elevated seawater pCO2 differentially affects branchial acid-base transporters over the course of development in the cephalopod Sepia officinalis. American Journal of Physiology, 300(5), R1100-R1114
title_full_unstemmed Seawater carbonate chemistry, mass, length and gene expression of Sepia officinalis during experiments, 2011, supplement to: Hu, Marian Y; Tseng, Yung-Che; Stumpp, Meike; Gutowska, Magdalena A; Kiko, Rainer; Lucassen, Magnus; Melzner, Frank (2011): Elevated seawater pCO2 differentially affects branchial acid-base transporters over the course of development in the cephalopod Sepia officinalis. American Journal of Physiology, 300(5), R1100-R1114
title_sort seawater carbonate chemistry, mass, length and gene expression of sepia officinalis during experiments, 2011, supplement to: hu, marian y; tseng, yung-che; stumpp, meike; gutowska, magdalena a; kiko, rainer; lucassen, magnus; melzner, frank (2011): elevated seawater pco2 differentially affects branchial acid-base transporters over the course of development in the cephalopod sepia officinalis. american journal of physiology, 300(5), r1100-r1114
publisher PANGAEA - Data Publisher for Earth & Environmental Science
publishDate 2011
url https://dx.doi.org/10.1594/pangaea.774787
https://doi.pangaea.de/10.1594/PANGAEA.774787
long_lat ENVELOPE(-58.750,-58.750,-62.217,-62.217)
ENVELOPE(25.252,25.252,66.630,66.630)
geographic Marian
Sonka
geographic_facet Marian
Sonka
genre North Atlantic
Ocean acidification
genre_facet North Atlantic
Ocean acidification
op_relation https://dx.doi.org/10.1152/ajpregu.00653.2010
op_rights Creative Commons Attribution 3.0 Unported
https://creativecommons.org/licenses/by/3.0/legalcode
cc-by-3.0
op_rightsnorm CC-BY
op_doi https://doi.org/10.1594/pangaea.774787
https://doi.org/10.1152/ajpregu.00653.2010
_version_ 1766137529756549120
spelling ftdatacite:10.1594/pangaea.774787 2023-05-15T17:37:32+02:00 Seawater carbonate chemistry, mass, length and gene expression of Sepia officinalis during experiments, 2011, supplement to: Hu, Marian Y; Tseng, Yung-Che; Stumpp, Meike; Gutowska, Magdalena A; Kiko, Rainer; Lucassen, Magnus; Melzner, Frank (2011): Elevated seawater pCO2 differentially affects branchial acid-base transporters over the course of development in the cephalopod Sepia officinalis. American Journal of Physiology, 300(5), R1100-R1114 Hu, Marian Y Tseng, Yung-Che Stumpp, Meike Gutowska, Magdalena A Kiko, Rainer Lucassen, Magnus Melzner, Frank 2011 text/tab-separated-values https://dx.doi.org/10.1594/pangaea.774787 https://doi.pangaea.de/10.1594/PANGAEA.774787 en eng PANGAEA - Data Publisher for Earth & Environmental Science https://dx.doi.org/10.1152/ajpregu.00653.2010 Creative Commons Attribution 3.0 Unported https://creativecommons.org/licenses/by/3.0/legalcode cc-by-3.0 CC-BY Acid-base regulation Animalia Benthic animals Benthos Coast and continental shelf Containers and aquaria 20-1000 L or < 1 m**2 Gene expression incl. proteomics Growth/Morphology Laboratory experiment Mollusca North Atlantic Sepia officinalis Single species Temperate Species Comment Experimental treatment Experiment day Salinity Salinity, standard deviation Temperature, water Temperature, standard deviation pH pH, standard deviation Aragonite saturation state Aragonite saturation state, standard deviation Carbon dioxide, partial pressure Carbon dioxide, partial pressure, standard deviation Alkalinity, total Alkalinity, total, standard deviation Sepia officinalis, mass Sepia officinalis, mass, standard deviation Sepia officinalis, length, mantle Sepia officinalis, length, mantle, standard deviation Sodium/Potassium adenosine triphosphatase gene expression Sodium/Potassium adenosine triphosphatase gene expression, standard deviation Sodium/bicarbonate cotransporter gene expression Sodium/bicarbonate cotransporter gene expression, standard deviation Sodium driven chlorine/bicarbonate exchanger gene expression Sodium driven chlorine/bicarbonate exchanger gene expression, standard deviation Carbonic anhydrase gene expression Carbonic anhydrase gene expression, standard deviation Adenosine triphosphate synthase gene expression Adenosine triphosphate synthase gene expression, standard deviation Cytochrome P-450 gene expression Cytochrome P-450 gene expression, standard deviation Cytochrome-c-oxydase gene expression Cytochrome-c-oxydase gene expression, standard deviation Octopine dehydrogenase gene expression Octopine dehydrogenase gene expression, standard deviation Sodium/Potassium adenosine triphosphatase maximum Sodium/Potassium adenosine triphosphatase maximum, standard deviation Sodium/Potassium adenosine triphosphatase relative protein concentration Sodium/Potassium adenosine triphosphatase relative protein concentration, standard deviation Sodium/Potassium adenosine triphosphatase relative mRNA expression Sodium/Potassium adenosine triphosphatase relative mRNA expression, standard deviation Sepia officinalis, perivitelline fluid, pH Sepia officinalis, perivitelline fluid, pCO2 Gene name Sepia officinalis, mRNA gene expression Sepia officinalis, mRNA gene expression, standard deviation Sepia officinalis, mRNA gene expression change Carbonate system computation flag Carbon dioxide Partial pressure of carbon dioxide water at sea surface temperature wet air Fugacity of carbon dioxide water at sea surface temperature wet air Bicarbonate ion Carbonate ion Carbon, inorganic, dissolved Calcite saturation state WTW 340i pH-analyzer and WTW SenTix 81-electrode Calculated using CO2SYS Potentiometric open-cell titration Precision scale Sartorius TE64, Sartorius AG, Germany Stereomicroscopy Leica see references Calculated using seacarb after Nisumaa et al. 2010 Biological Impacts of Ocean Acidification BIOACID European network of excellence for Ocean Ecosystems Analysis EUR-OCEANS European Project on Ocean Acidification EPOCA Ocean Acidification International Coordination Centre OA-ICC Dataset dataset Supplementary Dataset 2011 ftdatacite https://doi.org/10.1594/pangaea.774787 https://doi.org/10.1152/ajpregu.00653.2010 2022-02-09T13:11:39Z The specific transporters involved in maintenance of blood pH homeostasis in cephalopod molluscs have not been identified to date. Using in situ hybridization and immuno histochemical methods, we demonstrate that Na+/K+-ATPase (soNKA), a V-type H+-ATPase (soV-HA), and Na+/HCO3- cotransporter (soNBC) are co-localized in NKA-rich cells in the gills of Sepia officinalis. mRNA expression patterns of these transporters and selected metabolic genes were examined in response to moderately elevated seawater pCO2 (0.16 and 0.35 kPa) over a time-course of six weeks in different ontogenetic stages. The applied CO2 concentrations are relevant for ocean acidification scenarios projected for the coming decades. We determined strong expression changes in late stage embryos and hatchlings, with one to three log2-fold reductions in soNKA, soNBCe, socCAII and COX. In contrast, no hypercapnia induced changes in mRNA expression were observed in juveniles during both short- and long-term exposure. However a transiently increased demand of ion regulatory demand was evident during the initial acclimation reaction to elevated seawater pCO2. Gill Na+/K+-ATPase activity and protein concentration were increased by approximately 15% in during short (2-11 day), but not long term (42 day) exposure. Our findings support the hypothesis that the energy budget of adult cephalopods is not significantly compromised during long-term exposure to moderate environmental hypercapnia. However, the down regulation of ion-regulatory and metabolic genes in late stage embryos, taken together with a significant reduction in somatic growth, indicates that cephalopod early life stages are challenged by elevated seawater pCO2. : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne and Gattuso, 2011) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). Dataset North Atlantic Ocean acidification DataCite Metadata Store (German National Library of Science and Technology) Marian ENVELOPE(-58.750,-58.750,-62.217,-62.217) Sonka ENVELOPE(25.252,25.252,66.630,66.630)