Seawater carbonate chemistry, Mg/Ca, Sr/Ca, oxygen production and calcification rate during experiments with coral Pocillopora damicornis, 2011, supplement to: Allison, Nicola; Cohen, Itay; Finch, Adrian A; Erez, Jonathan; EMIF (2011): Controls on Sr/Ca and Mg/Ca in scleractinian corals: The effects of Ca-ATPase and transcellular Ca channels on skeletal chemistry. Geochimica et Cosmochimica Acta, 75(21), 6350-6360

The Sr/Ca of aragonitic coral skeletons is a commonly used palaeothermometer. However skeletal Sr/Ca is typically dominated by weekly-monthly oscillations which do not reflect temperature or seawater composition and the origins of which are currently unknown. To test the impact of transcellular Ca2+...

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Bibliographic Details
Main Authors: Allison, Nicola, Cohen, Itay, Finch, Adrian A, Erez, Jonathan, EMIF
Format: Dataset
Language:English
Published: PANGAEA - Data Publisher for Earth & Environmental Science 2011
Subjects:
pH
Online Access:https://dx.doi.org/10.1594/pangaea.774781
https://doi.pangaea.de/10.1594/PANGAEA.774781
id ftdatacite:10.1594/pangaea.774781
record_format openpolar
institution Open Polar
collection DataCite Metadata Store (German National Library of Science and Technology)
op_collection_id ftdatacite
language English
topic Animalia
Benthic animals
Benthos
Biomass/Abundance/Elemental composition
Bottles or small containers/Aquaria <20 L
Calcification/Dissolution
Cnidaria
Coast and continental shelf
Laboratory experiment
Pocillopora damicornis
Primary production/Photosynthesis
Red Sea
Single species
Temperate
Experimental treatment
Identification
Replicates
Salinity
Temperature, water
pH
pH, standard deviation
Alkalinity, total
Alkalinity, total, standard deviation
Oxygen
Oxygen, standard deviation
Magnesium/Calcium ratio
Magnesium/Calcium ratio, standard deviation
Strontium/Calcium ratio
Strontium/Calcium ratio, standard deviation
Sample ID
Oxygen production rate
Net calcification rate of calcium carbonate
Carbonate system computation flag
Carbon dioxide
Partial pressure of carbon dioxide water at sea surface temperature wet air
Fugacity of carbon dioxide water at sea surface temperature wet air
Bicarbonate ion
Carbonate ion
Carbon, inorganic, dissolved
Aragonite saturation state
Calcite saturation state
Measured
Alkalinity, Gran titration Gran, 1950
Titration, Winkler
ICP-MS, Thermo Scientific, XSeries 2
Calculated, see references
Calculated using seacarb after Nisumaa et al. 2010
European network of excellence for Ocean Ecosystems Analysis EUR-OCEANS
European Project on Ocean Acidification EPOCA
Ocean Acidification International Coordination Centre OA-ICC
spellingShingle Animalia
Benthic animals
Benthos
Biomass/Abundance/Elemental composition
Bottles or small containers/Aquaria <20 L
Calcification/Dissolution
Cnidaria
Coast and continental shelf
Laboratory experiment
Pocillopora damicornis
Primary production/Photosynthesis
Red Sea
Single species
Temperate
Experimental treatment
Identification
Replicates
Salinity
Temperature, water
pH
pH, standard deviation
Alkalinity, total
Alkalinity, total, standard deviation
Oxygen
Oxygen, standard deviation
Magnesium/Calcium ratio
Magnesium/Calcium ratio, standard deviation
Strontium/Calcium ratio
Strontium/Calcium ratio, standard deviation
Sample ID
Oxygen production rate
Net calcification rate of calcium carbonate
Carbonate system computation flag
Carbon dioxide
Partial pressure of carbon dioxide water at sea surface temperature wet air
Fugacity of carbon dioxide water at sea surface temperature wet air
Bicarbonate ion
Carbonate ion
Carbon, inorganic, dissolved
Aragonite saturation state
Calcite saturation state
Measured
Alkalinity, Gran titration Gran, 1950
Titration, Winkler
ICP-MS, Thermo Scientific, XSeries 2
Calculated, see references
Calculated using seacarb after Nisumaa et al. 2010
European network of excellence for Ocean Ecosystems Analysis EUR-OCEANS
European Project on Ocean Acidification EPOCA
Ocean Acidification International Coordination Centre OA-ICC
Allison, Nicola
Cohen, Itay
Finch, Adrian A
Erez, Jonathan
EMIF
Seawater carbonate chemistry, Mg/Ca, Sr/Ca, oxygen production and calcification rate during experiments with coral Pocillopora damicornis, 2011, supplement to: Allison, Nicola; Cohen, Itay; Finch, Adrian A; Erez, Jonathan; EMIF (2011): Controls on Sr/Ca and Mg/Ca in scleractinian corals: The effects of Ca-ATPase and transcellular Ca channels on skeletal chemistry. Geochimica et Cosmochimica Acta, 75(21), 6350-6360
topic_facet Animalia
Benthic animals
Benthos
Biomass/Abundance/Elemental composition
Bottles or small containers/Aquaria <20 L
Calcification/Dissolution
Cnidaria
Coast and continental shelf
Laboratory experiment
Pocillopora damicornis
Primary production/Photosynthesis
Red Sea
Single species
Temperate
Experimental treatment
Identification
Replicates
Salinity
Temperature, water
pH
pH, standard deviation
Alkalinity, total
Alkalinity, total, standard deviation
Oxygen
Oxygen, standard deviation
Magnesium/Calcium ratio
Magnesium/Calcium ratio, standard deviation
Strontium/Calcium ratio
Strontium/Calcium ratio, standard deviation
Sample ID
Oxygen production rate
Net calcification rate of calcium carbonate
Carbonate system computation flag
Carbon dioxide
Partial pressure of carbon dioxide water at sea surface temperature wet air
Fugacity of carbon dioxide water at sea surface temperature wet air
Bicarbonate ion
Carbonate ion
Carbon, inorganic, dissolved
Aragonite saturation state
Calcite saturation state
Measured
Alkalinity, Gran titration Gran, 1950
Titration, Winkler
ICP-MS, Thermo Scientific, XSeries 2
Calculated, see references
Calculated using seacarb after Nisumaa et al. 2010
European network of excellence for Ocean Ecosystems Analysis EUR-OCEANS
European Project on Ocean Acidification EPOCA
Ocean Acidification International Coordination Centre OA-ICC
description The Sr/Ca of aragonitic coral skeletons is a commonly used palaeothermometer. However skeletal Sr/Ca is typically dominated by weekly-monthly oscillations which do not reflect temperature or seawater composition and the origins of which are currently unknown. To test the impact of transcellular Ca2+ transport processes on skeletal Sr/Ca, colonies of the branching coral, Pocillopora damicornis, were cultured in the presence of inhibitors of Ca-ATPase (ruthenium red) and Ca channels (verapamil hydrochloride). The photosynthesis, respiration and calcification rates of the colonies were monitored throughout the experiment. The skeleton deposited in the presence of the inhibitors was identified (by 42Ca spike) and analysed for Sr/Ca and Mg/Ca by secondary ion mass spectrometry. The Sr/Ca of the aragonite deposited in the presence of either of the inhibitors was not significantly different from that of the solvent (dimethyl sulfoxide) control, although the coral calcification rate was reduced by up to 66% and 73% in the ruthenium red and verapamil treatments, respectively. The typical precision (95% confidence limits) of mean Sr/Ca determinations within any treatment was : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne and Gattuso, 2011) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI).
format Dataset
author Allison, Nicola
Cohen, Itay
Finch, Adrian A
Erez, Jonathan
EMIF
author_facet Allison, Nicola
Cohen, Itay
Finch, Adrian A
Erez, Jonathan
EMIF
author_sort Allison, Nicola
title Seawater carbonate chemistry, Mg/Ca, Sr/Ca, oxygen production and calcification rate during experiments with coral Pocillopora damicornis, 2011, supplement to: Allison, Nicola; Cohen, Itay; Finch, Adrian A; Erez, Jonathan; EMIF (2011): Controls on Sr/Ca and Mg/Ca in scleractinian corals: The effects of Ca-ATPase and transcellular Ca channels on skeletal chemistry. Geochimica et Cosmochimica Acta, 75(21), 6350-6360
title_short Seawater carbonate chemistry, Mg/Ca, Sr/Ca, oxygen production and calcification rate during experiments with coral Pocillopora damicornis, 2011, supplement to: Allison, Nicola; Cohen, Itay; Finch, Adrian A; Erez, Jonathan; EMIF (2011): Controls on Sr/Ca and Mg/Ca in scleractinian corals: The effects of Ca-ATPase and transcellular Ca channels on skeletal chemistry. Geochimica et Cosmochimica Acta, 75(21), 6350-6360
title_full Seawater carbonate chemistry, Mg/Ca, Sr/Ca, oxygen production and calcification rate during experiments with coral Pocillopora damicornis, 2011, supplement to: Allison, Nicola; Cohen, Itay; Finch, Adrian A; Erez, Jonathan; EMIF (2011): Controls on Sr/Ca and Mg/Ca in scleractinian corals: The effects of Ca-ATPase and transcellular Ca channels on skeletal chemistry. Geochimica et Cosmochimica Acta, 75(21), 6350-6360
title_fullStr Seawater carbonate chemistry, Mg/Ca, Sr/Ca, oxygen production and calcification rate during experiments with coral Pocillopora damicornis, 2011, supplement to: Allison, Nicola; Cohen, Itay; Finch, Adrian A; Erez, Jonathan; EMIF (2011): Controls on Sr/Ca and Mg/Ca in scleractinian corals: The effects of Ca-ATPase and transcellular Ca channels on skeletal chemistry. Geochimica et Cosmochimica Acta, 75(21), 6350-6360
title_full_unstemmed Seawater carbonate chemistry, Mg/Ca, Sr/Ca, oxygen production and calcification rate during experiments with coral Pocillopora damicornis, 2011, supplement to: Allison, Nicola; Cohen, Itay; Finch, Adrian A; Erez, Jonathan; EMIF (2011): Controls on Sr/Ca and Mg/Ca in scleractinian corals: The effects of Ca-ATPase and transcellular Ca channels on skeletal chemistry. Geochimica et Cosmochimica Acta, 75(21), 6350-6360
title_sort seawater carbonate chemistry, mg/ca, sr/ca, oxygen production and calcification rate during experiments with coral pocillopora damicornis, 2011, supplement to: allison, nicola; cohen, itay; finch, adrian a; erez, jonathan; emif (2011): controls on sr/ca and mg/ca in scleractinian corals: the effects of ca-atpase and transcellular ca channels on skeletal chemistry. geochimica et cosmochimica acta, 75(21), 6350-6360
publisher PANGAEA - Data Publisher for Earth & Environmental Science
publishDate 2011
url https://dx.doi.org/10.1594/pangaea.774781
https://doi.pangaea.de/10.1594/PANGAEA.774781
long_lat ENVELOPE(167.383,167.383,-72.567,-72.567)
geographic Finch
geographic_facet Finch
genre Ocean acidification
genre_facet Ocean acidification
op_relation https://dx.doi.org/10.1016/j.gca.2011.08.012
op_rights Creative Commons Attribution 3.0 Unported
https://creativecommons.org/licenses/by/3.0/legalcode
cc-by-3.0
op_rightsnorm CC-BY
op_doi https://doi.org/10.1594/pangaea.774781
https://doi.org/10.1016/j.gca.2011.08.012
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spelling ftdatacite:10.1594/pangaea.774781 2023-05-15T17:50:52+02:00 Seawater carbonate chemistry, Mg/Ca, Sr/Ca, oxygen production and calcification rate during experiments with coral Pocillopora damicornis, 2011, supplement to: Allison, Nicola; Cohen, Itay; Finch, Adrian A; Erez, Jonathan; EMIF (2011): Controls on Sr/Ca and Mg/Ca in scleractinian corals: The effects of Ca-ATPase and transcellular Ca channels on skeletal chemistry. Geochimica et Cosmochimica Acta, 75(21), 6350-6360 Allison, Nicola Cohen, Itay Finch, Adrian A Erez, Jonathan EMIF 2011 text/tab-separated-values https://dx.doi.org/10.1594/pangaea.774781 https://doi.pangaea.de/10.1594/PANGAEA.774781 en eng PANGAEA - Data Publisher for Earth & Environmental Science https://dx.doi.org/10.1016/j.gca.2011.08.012 Creative Commons Attribution 3.0 Unported https://creativecommons.org/licenses/by/3.0/legalcode cc-by-3.0 CC-BY Animalia Benthic animals Benthos Biomass/Abundance/Elemental composition Bottles or small containers/Aquaria <20 L Calcification/Dissolution Cnidaria Coast and continental shelf Laboratory experiment Pocillopora damicornis Primary production/Photosynthesis Red Sea Single species Temperate Experimental treatment Identification Replicates Salinity Temperature, water pH pH, standard deviation Alkalinity, total Alkalinity, total, standard deviation Oxygen Oxygen, standard deviation Magnesium/Calcium ratio Magnesium/Calcium ratio, standard deviation Strontium/Calcium ratio Strontium/Calcium ratio, standard deviation Sample ID Oxygen production rate Net calcification rate of calcium carbonate Carbonate system computation flag Carbon dioxide Partial pressure of carbon dioxide water at sea surface temperature wet air Fugacity of carbon dioxide water at sea surface temperature wet air Bicarbonate ion Carbonate ion Carbon, inorganic, dissolved Aragonite saturation state Calcite saturation state Measured Alkalinity, Gran titration Gran, 1950 Titration, Winkler ICP-MS, Thermo Scientific, XSeries 2 Calculated, see references Calculated using seacarb after Nisumaa et al. 2010 European network of excellence for Ocean Ecosystems Analysis EUR-OCEANS European Project on Ocean Acidification EPOCA Ocean Acidification International Coordination Centre OA-ICC Dataset dataset Supplementary Dataset 2011 ftdatacite https://doi.org/10.1594/pangaea.774781 https://doi.org/10.1016/j.gca.2011.08.012 2022-02-09T12:07:01Z The Sr/Ca of aragonitic coral skeletons is a commonly used palaeothermometer. However skeletal Sr/Ca is typically dominated by weekly-monthly oscillations which do not reflect temperature or seawater composition and the origins of which are currently unknown. To test the impact of transcellular Ca2+ transport processes on skeletal Sr/Ca, colonies of the branching coral, Pocillopora damicornis, were cultured in the presence of inhibitors of Ca-ATPase (ruthenium red) and Ca channels (verapamil hydrochloride). The photosynthesis, respiration and calcification rates of the colonies were monitored throughout the experiment. The skeleton deposited in the presence of the inhibitors was identified (by 42Ca spike) and analysed for Sr/Ca and Mg/Ca by secondary ion mass spectrometry. The Sr/Ca of the aragonite deposited in the presence of either of the inhibitors was not significantly different from that of the solvent (dimethyl sulfoxide) control, although the coral calcification rate was reduced by up to 66% and 73% in the ruthenium red and verapamil treatments, respectively. The typical precision (95% confidence limits) of mean Sr/Ca determinations within any treatment was : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne and Gattuso, 2011) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). Dataset Ocean acidification DataCite Metadata Store (German National Library of Science and Technology) Finch ENVELOPE(167.383,167.383,-72.567,-72.567)