Seawater carbonate chemistry, nitrogen concentration and macro community analyse, 2011, supplement to: Witt, Verena; Wild, Christian; Anthony, Kenneth R N; Diaz-Pulido, Guillermo; Uthicke, Sven (2011): Effects of ocean acidification on microbial community composition of, and oxygen fluxes through, biofilms from the Great Barrier Reef. Environmental Microbiology, 13(11), 2976-2989

Rising anthropogenic CO2 emissions acidify the oceans, and cause changes to seawater carbon chemistry. Bacterial biofilm communities reflect environmental disturbances and may rapidly respond to ocean acidification. This study investigates community composition and activity responses to experimental...

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Bibliographic Details
Main Authors: Witt, Verena, Wild, Christian, Anthony, Kenneth R N, Diaz-Pulido, Guillermo, Uthicke, Sven
Format: Dataset
Language:English
Published: PANGAEA - Data Publisher for Earth & Environmental Science 2011
Subjects:
pH
Online Access:https://dx.doi.org/10.1594/pangaea.770491
https://doi.pangaea.de/10.1594/PANGAEA.770491
id ftdatacite:10.1594/pangaea.770491
record_format openpolar
institution Open Polar
collection DataCite Metadata Store (German National Library of Science and Technology)
op_collection_id ftdatacite
language English
topic Benthos
Biomass/Abundance/Elemental composition
Bottles or small containers/Aquaria <20 L
Coast and continental shelf
Community composition and diversity
Entire community
Laboratory experiment
Rocky-shore community
South Pacific
Temperate
Experimental treatment
Salinity
Temperature, water
pH
pH, standard error
Partial pressure of carbon dioxide water at sea surface temperature wet air
Partial pressure of carbon dioxide water at sea surface temperature wet air, standard error
Alkalinity, total
Alkalinity, total, standard error
Carbon, inorganic, dissolved
Carbon, inorganic, dissolved, standard error
Aragonite saturation state
Aragonite saturation state, standard deviation
Carbon, inorganic, total
Carbon, inorganic, total, standard deviation
Carbon, organic, total
Carbon, organic, total, standard deviation
Nitrogen, total
Nitrogen, total, standard deviation
Nitrogen, inorganic
Carbon/Nitrogen ratio, standard deviation
Replicates
Experiment day
Diatoms
Algae
Carbonate system computation flag
Carbon dioxide
Fugacity of carbon dioxide water at sea surface temperature wet air
Bicarbonate ion
Carbonate ion
Calcite saturation state
Temperature logger, Onset, UA-001
pH meter HQ10-HQ20 Meters, Hach, USA
Calculated using CO2SYS
Potentiometric open-cell titration
Element analyser, THERMO NA 2500
TOC analyzer Shimadzu
Calculated using seacarb after Nisumaa et al. 2010
European network of excellence for Ocean Ecosystems Analysis EUR-OCEANS
European Project on Ocean Acidification EPOCA
Ocean Acidification International Coordination Centre OA-ICC
spellingShingle Benthos
Biomass/Abundance/Elemental composition
Bottles or small containers/Aquaria <20 L
Coast and continental shelf
Community composition and diversity
Entire community
Laboratory experiment
Rocky-shore community
South Pacific
Temperate
Experimental treatment
Salinity
Temperature, water
pH
pH, standard error
Partial pressure of carbon dioxide water at sea surface temperature wet air
Partial pressure of carbon dioxide water at sea surface temperature wet air, standard error
Alkalinity, total
Alkalinity, total, standard error
Carbon, inorganic, dissolved
Carbon, inorganic, dissolved, standard error
Aragonite saturation state
Aragonite saturation state, standard deviation
Carbon, inorganic, total
Carbon, inorganic, total, standard deviation
Carbon, organic, total
Carbon, organic, total, standard deviation
Nitrogen, total
Nitrogen, total, standard deviation
Nitrogen, inorganic
Carbon/Nitrogen ratio, standard deviation
Replicates
Experiment day
Diatoms
Algae
Carbonate system computation flag
Carbon dioxide
Fugacity of carbon dioxide water at sea surface temperature wet air
Bicarbonate ion
Carbonate ion
Calcite saturation state
Temperature logger, Onset, UA-001
pH meter HQ10-HQ20 Meters, Hach, USA
Calculated using CO2SYS
Potentiometric open-cell titration
Element analyser, THERMO NA 2500
TOC analyzer Shimadzu
Calculated using seacarb after Nisumaa et al. 2010
European network of excellence for Ocean Ecosystems Analysis EUR-OCEANS
European Project on Ocean Acidification EPOCA
Ocean Acidification International Coordination Centre OA-ICC
Witt, Verena
Wild, Christian
Anthony, Kenneth R N
Diaz-Pulido, Guillermo
Uthicke, Sven
Seawater carbonate chemistry, nitrogen concentration and macro community analyse, 2011, supplement to: Witt, Verena; Wild, Christian; Anthony, Kenneth R N; Diaz-Pulido, Guillermo; Uthicke, Sven (2011): Effects of ocean acidification on microbial community composition of, and oxygen fluxes through, biofilms from the Great Barrier Reef. Environmental Microbiology, 13(11), 2976-2989
topic_facet Benthos
Biomass/Abundance/Elemental composition
Bottles or small containers/Aquaria <20 L
Coast and continental shelf
Community composition and diversity
Entire community
Laboratory experiment
Rocky-shore community
South Pacific
Temperate
Experimental treatment
Salinity
Temperature, water
pH
pH, standard error
Partial pressure of carbon dioxide water at sea surface temperature wet air
Partial pressure of carbon dioxide water at sea surface temperature wet air, standard error
Alkalinity, total
Alkalinity, total, standard error
Carbon, inorganic, dissolved
Carbon, inorganic, dissolved, standard error
Aragonite saturation state
Aragonite saturation state, standard deviation
Carbon, inorganic, total
Carbon, inorganic, total, standard deviation
Carbon, organic, total
Carbon, organic, total, standard deviation
Nitrogen, total
Nitrogen, total, standard deviation
Nitrogen, inorganic
Carbon/Nitrogen ratio, standard deviation
Replicates
Experiment day
Diatoms
Algae
Carbonate system computation flag
Carbon dioxide
Fugacity of carbon dioxide water at sea surface temperature wet air
Bicarbonate ion
Carbonate ion
Calcite saturation state
Temperature logger, Onset, UA-001
pH meter HQ10-HQ20 Meters, Hach, USA
Calculated using CO2SYS
Potentiometric open-cell titration
Element analyser, THERMO NA 2500
TOC analyzer Shimadzu
Calculated using seacarb after Nisumaa et al. 2010
European network of excellence for Ocean Ecosystems Analysis EUR-OCEANS
European Project on Ocean Acidification EPOCA
Ocean Acidification International Coordination Centre OA-ICC
description Rising anthropogenic CO2 emissions acidify the oceans, and cause changes to seawater carbon chemistry. Bacterial biofilm communities reflect environmental disturbances and may rapidly respond to ocean acidification. This study investigates community composition and activity responses to experimental ocean acidification in biofilms from the Australian Great Barrier Reef. Natural biofilms grown on glass slides were exposed for 11 d to four controlled pCO2 concentrations representing the following scenarios: A) pre-industrial (~300 ppm), B) present-day (~400 ppm), C) mid century (~560 ppm) and D) late century (~1140 ppm). Terminal restriction fragment length polymorphism and clone library analyses of 16S rRNA genes revealed CO2-correlated bacterial community shifts between treatments A, B and D. Observed bacterial community shifts were driven by decreases in the relative abundance of Alphaproteobacteria and increases of Flavobacteriales (Bacteroidetes) at increased CO2 concentrations, indicating pH sensitivity of specific bacterial groups. Elevated pCO2 (C + D) shifted biofilm algal communities and significantly increased C and N contents, yet O2 fluxes, measured using in light and dark incubations, remained unchanged. Our findings suggest that bacterial biofilm communities rapidly adapt and reorganize in response to high pCO2 to maintain activity such as oxygen production. : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne and Gattuso, 2011) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI).
format Dataset
author Witt, Verena
Wild, Christian
Anthony, Kenneth R N
Diaz-Pulido, Guillermo
Uthicke, Sven
author_facet Witt, Verena
Wild, Christian
Anthony, Kenneth R N
Diaz-Pulido, Guillermo
Uthicke, Sven
author_sort Witt, Verena
title Seawater carbonate chemistry, nitrogen concentration and macro community analyse, 2011, supplement to: Witt, Verena; Wild, Christian; Anthony, Kenneth R N; Diaz-Pulido, Guillermo; Uthicke, Sven (2011): Effects of ocean acidification on microbial community composition of, and oxygen fluxes through, biofilms from the Great Barrier Reef. Environmental Microbiology, 13(11), 2976-2989
title_short Seawater carbonate chemistry, nitrogen concentration and macro community analyse, 2011, supplement to: Witt, Verena; Wild, Christian; Anthony, Kenneth R N; Diaz-Pulido, Guillermo; Uthicke, Sven (2011): Effects of ocean acidification on microbial community composition of, and oxygen fluxes through, biofilms from the Great Barrier Reef. Environmental Microbiology, 13(11), 2976-2989
title_full Seawater carbonate chemistry, nitrogen concentration and macro community analyse, 2011, supplement to: Witt, Verena; Wild, Christian; Anthony, Kenneth R N; Diaz-Pulido, Guillermo; Uthicke, Sven (2011): Effects of ocean acidification on microbial community composition of, and oxygen fluxes through, biofilms from the Great Barrier Reef. Environmental Microbiology, 13(11), 2976-2989
title_fullStr Seawater carbonate chemistry, nitrogen concentration and macro community analyse, 2011, supplement to: Witt, Verena; Wild, Christian; Anthony, Kenneth R N; Diaz-Pulido, Guillermo; Uthicke, Sven (2011): Effects of ocean acidification on microbial community composition of, and oxygen fluxes through, biofilms from the Great Barrier Reef. Environmental Microbiology, 13(11), 2976-2989
title_full_unstemmed Seawater carbonate chemistry, nitrogen concentration and macro community analyse, 2011, supplement to: Witt, Verena; Wild, Christian; Anthony, Kenneth R N; Diaz-Pulido, Guillermo; Uthicke, Sven (2011): Effects of ocean acidification on microbial community composition of, and oxygen fluxes through, biofilms from the Great Barrier Reef. Environmental Microbiology, 13(11), 2976-2989
title_sort seawater carbonate chemistry, nitrogen concentration and macro community analyse, 2011, supplement to: witt, verena; wild, christian; anthony, kenneth r n; diaz-pulido, guillermo; uthicke, sven (2011): effects of ocean acidification on microbial community composition of, and oxygen fluxes through, biofilms from the great barrier reef. environmental microbiology, 13(11), 2976-2989
publisher PANGAEA - Data Publisher for Earth & Environmental Science
publishDate 2011
url https://dx.doi.org/10.1594/pangaea.770491
https://doi.pangaea.de/10.1594/PANGAEA.770491
long_lat ENVELOPE(-60.667,-60.667,-63.783,-63.783)
ENVELOPE(-60.200,-60.200,-63.733,-63.733)
geographic Diaz
Pacific
Sven
geographic_facet Diaz
Pacific
Sven
genre Ocean acidification
genre_facet Ocean acidification
op_relation https://dx.doi.org/10.1111/j.1462-2920.2011.02571.x
op_rights Creative Commons Attribution 3.0 Unported
https://creativecommons.org/licenses/by/3.0/legalcode
cc-by-3.0
op_rightsnorm CC-BY
op_doi https://doi.org/10.1594/pangaea.770491
https://doi.org/10.1111/j.1462-2920.2011.02571.x
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spelling ftdatacite:10.1594/pangaea.770491 2023-05-15T17:50:01+02:00 Seawater carbonate chemistry, nitrogen concentration and macro community analyse, 2011, supplement to: Witt, Verena; Wild, Christian; Anthony, Kenneth R N; Diaz-Pulido, Guillermo; Uthicke, Sven (2011): Effects of ocean acidification on microbial community composition of, and oxygen fluxes through, biofilms from the Great Barrier Reef. Environmental Microbiology, 13(11), 2976-2989 Witt, Verena Wild, Christian Anthony, Kenneth R N Diaz-Pulido, Guillermo Uthicke, Sven 2011 text/tab-separated-values https://dx.doi.org/10.1594/pangaea.770491 https://doi.pangaea.de/10.1594/PANGAEA.770491 en eng PANGAEA - Data Publisher for Earth & Environmental Science https://dx.doi.org/10.1111/j.1462-2920.2011.02571.x Creative Commons Attribution 3.0 Unported https://creativecommons.org/licenses/by/3.0/legalcode cc-by-3.0 CC-BY Benthos Biomass/Abundance/Elemental composition Bottles or small containers/Aquaria <20 L Coast and continental shelf Community composition and diversity Entire community Laboratory experiment Rocky-shore community South Pacific Temperate Experimental treatment Salinity Temperature, water pH pH, standard error Partial pressure of carbon dioxide water at sea surface temperature wet air Partial pressure of carbon dioxide water at sea surface temperature wet air, standard error Alkalinity, total Alkalinity, total, standard error Carbon, inorganic, dissolved Carbon, inorganic, dissolved, standard error Aragonite saturation state Aragonite saturation state, standard deviation Carbon, inorganic, total Carbon, inorganic, total, standard deviation Carbon, organic, total Carbon, organic, total, standard deviation Nitrogen, total Nitrogen, total, standard deviation Nitrogen, inorganic Carbon/Nitrogen ratio, standard deviation Replicates Experiment day Diatoms Algae Carbonate system computation flag Carbon dioxide Fugacity of carbon dioxide water at sea surface temperature wet air Bicarbonate ion Carbonate ion Calcite saturation state Temperature logger, Onset, UA-001 pH meter HQ10-HQ20 Meters, Hach, USA Calculated using CO2SYS Potentiometric open-cell titration Element analyser, THERMO NA 2500 TOC analyzer Shimadzu Calculated using seacarb after Nisumaa et al. 2010 European network of excellence for Ocean Ecosystems Analysis EUR-OCEANS European Project on Ocean Acidification EPOCA Ocean Acidification International Coordination Centre OA-ICC Dataset dataset Supplementary Dataset 2011 ftdatacite https://doi.org/10.1594/pangaea.770491 https://doi.org/10.1111/j.1462-2920.2011.02571.x 2022-02-09T12:27:05Z Rising anthropogenic CO2 emissions acidify the oceans, and cause changes to seawater carbon chemistry. Bacterial biofilm communities reflect environmental disturbances and may rapidly respond to ocean acidification. This study investigates community composition and activity responses to experimental ocean acidification in biofilms from the Australian Great Barrier Reef. Natural biofilms grown on glass slides were exposed for 11 d to four controlled pCO2 concentrations representing the following scenarios: A) pre-industrial (~300 ppm), B) present-day (~400 ppm), C) mid century (~560 ppm) and D) late century (~1140 ppm). Terminal restriction fragment length polymorphism and clone library analyses of 16S rRNA genes revealed CO2-correlated bacterial community shifts between treatments A, B and D. Observed bacterial community shifts were driven by decreases in the relative abundance of Alphaproteobacteria and increases of Flavobacteriales (Bacteroidetes) at increased CO2 concentrations, indicating pH sensitivity of specific bacterial groups. Elevated pCO2 (C + D) shifted biofilm algal communities and significantly increased C and N contents, yet O2 fluxes, measured using in light and dark incubations, remained unchanged. Our findings suggest that bacterial biofilm communities rapidly adapt and reorganize in response to high pCO2 to maintain activity such as oxygen production. : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne and Gattuso, 2011) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). Dataset Ocean acidification DataCite Metadata Store (German National Library of Science and Technology) Diaz ENVELOPE(-60.667,-60.667,-63.783,-63.783) Pacific Sven ENVELOPE(-60.200,-60.200,-63.733,-63.733)