Seawater carbonate chemistry, nitrogen concentration and macro community analyse, 2011, supplement to: Witt, Verena; Wild, Christian; Anthony, Kenneth R N; Diaz-Pulido, Guillermo; Uthicke, Sven (2011): Effects of ocean acidification on microbial community composition of, and oxygen fluxes through, biofilms from the Great Barrier Reef. Environmental Microbiology, 13(11), 2976-2989
Rising anthropogenic CO2 emissions acidify the oceans, and cause changes to seawater carbon chemistry. Bacterial biofilm communities reflect environmental disturbances and may rapidly respond to ocean acidification. This study investigates community composition and activity responses to experimental...
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Format: | Dataset |
Language: | English |
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PANGAEA - Data Publisher for Earth & Environmental Science
2011
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Subjects: | |
Online Access: | https://dx.doi.org/10.1594/pangaea.770491 https://doi.pangaea.de/10.1594/PANGAEA.770491 |
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ftdatacite:10.1594/pangaea.770491 |
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record_format |
openpolar |
institution |
Open Polar |
collection |
DataCite Metadata Store (German National Library of Science and Technology) |
op_collection_id |
ftdatacite |
language |
English |
topic |
Benthos Biomass/Abundance/Elemental composition Bottles or small containers/Aquaria <20 L Coast and continental shelf Community composition and diversity Entire community Laboratory experiment Rocky-shore community South Pacific Temperate Experimental treatment Salinity Temperature, water pH pH, standard error Partial pressure of carbon dioxide water at sea surface temperature wet air Partial pressure of carbon dioxide water at sea surface temperature wet air, standard error Alkalinity, total Alkalinity, total, standard error Carbon, inorganic, dissolved Carbon, inorganic, dissolved, standard error Aragonite saturation state Aragonite saturation state, standard deviation Carbon, inorganic, total Carbon, inorganic, total, standard deviation Carbon, organic, total Carbon, organic, total, standard deviation Nitrogen, total Nitrogen, total, standard deviation Nitrogen, inorganic Carbon/Nitrogen ratio, standard deviation Replicates Experiment day Diatoms Algae Carbonate system computation flag Carbon dioxide Fugacity of carbon dioxide water at sea surface temperature wet air Bicarbonate ion Carbonate ion Calcite saturation state Temperature logger, Onset, UA-001 pH meter HQ10-HQ20 Meters, Hach, USA Calculated using CO2SYS Potentiometric open-cell titration Element analyser, THERMO NA 2500 TOC analyzer Shimadzu Calculated using seacarb after Nisumaa et al. 2010 European network of excellence for Ocean Ecosystems Analysis EUR-OCEANS European Project on Ocean Acidification EPOCA Ocean Acidification International Coordination Centre OA-ICC |
spellingShingle |
Benthos Biomass/Abundance/Elemental composition Bottles or small containers/Aquaria <20 L Coast and continental shelf Community composition and diversity Entire community Laboratory experiment Rocky-shore community South Pacific Temperate Experimental treatment Salinity Temperature, water pH pH, standard error Partial pressure of carbon dioxide water at sea surface temperature wet air Partial pressure of carbon dioxide water at sea surface temperature wet air, standard error Alkalinity, total Alkalinity, total, standard error Carbon, inorganic, dissolved Carbon, inorganic, dissolved, standard error Aragonite saturation state Aragonite saturation state, standard deviation Carbon, inorganic, total Carbon, inorganic, total, standard deviation Carbon, organic, total Carbon, organic, total, standard deviation Nitrogen, total Nitrogen, total, standard deviation Nitrogen, inorganic Carbon/Nitrogen ratio, standard deviation Replicates Experiment day Diatoms Algae Carbonate system computation flag Carbon dioxide Fugacity of carbon dioxide water at sea surface temperature wet air Bicarbonate ion Carbonate ion Calcite saturation state Temperature logger, Onset, UA-001 pH meter HQ10-HQ20 Meters, Hach, USA Calculated using CO2SYS Potentiometric open-cell titration Element analyser, THERMO NA 2500 TOC analyzer Shimadzu Calculated using seacarb after Nisumaa et al. 2010 European network of excellence for Ocean Ecosystems Analysis EUR-OCEANS European Project on Ocean Acidification EPOCA Ocean Acidification International Coordination Centre OA-ICC Witt, Verena Wild, Christian Anthony, Kenneth R N Diaz-Pulido, Guillermo Uthicke, Sven Seawater carbonate chemistry, nitrogen concentration and macro community analyse, 2011, supplement to: Witt, Verena; Wild, Christian; Anthony, Kenneth R N; Diaz-Pulido, Guillermo; Uthicke, Sven (2011): Effects of ocean acidification on microbial community composition of, and oxygen fluxes through, biofilms from the Great Barrier Reef. Environmental Microbiology, 13(11), 2976-2989 |
topic_facet |
Benthos Biomass/Abundance/Elemental composition Bottles or small containers/Aquaria <20 L Coast and continental shelf Community composition and diversity Entire community Laboratory experiment Rocky-shore community South Pacific Temperate Experimental treatment Salinity Temperature, water pH pH, standard error Partial pressure of carbon dioxide water at sea surface temperature wet air Partial pressure of carbon dioxide water at sea surface temperature wet air, standard error Alkalinity, total Alkalinity, total, standard error Carbon, inorganic, dissolved Carbon, inorganic, dissolved, standard error Aragonite saturation state Aragonite saturation state, standard deviation Carbon, inorganic, total Carbon, inorganic, total, standard deviation Carbon, organic, total Carbon, organic, total, standard deviation Nitrogen, total Nitrogen, total, standard deviation Nitrogen, inorganic Carbon/Nitrogen ratio, standard deviation Replicates Experiment day Diatoms Algae Carbonate system computation flag Carbon dioxide Fugacity of carbon dioxide water at sea surface temperature wet air Bicarbonate ion Carbonate ion Calcite saturation state Temperature logger, Onset, UA-001 pH meter HQ10-HQ20 Meters, Hach, USA Calculated using CO2SYS Potentiometric open-cell titration Element analyser, THERMO NA 2500 TOC analyzer Shimadzu Calculated using seacarb after Nisumaa et al. 2010 European network of excellence for Ocean Ecosystems Analysis EUR-OCEANS European Project on Ocean Acidification EPOCA Ocean Acidification International Coordination Centre OA-ICC |
description |
Rising anthropogenic CO2 emissions acidify the oceans, and cause changes to seawater carbon chemistry. Bacterial biofilm communities reflect environmental disturbances and may rapidly respond to ocean acidification. This study investigates community composition and activity responses to experimental ocean acidification in biofilms from the Australian Great Barrier Reef. Natural biofilms grown on glass slides were exposed for 11 d to four controlled pCO2 concentrations representing the following scenarios: A) pre-industrial (~300 ppm), B) present-day (~400 ppm), C) mid century (~560 ppm) and D) late century (~1140 ppm). Terminal restriction fragment length polymorphism and clone library analyses of 16S rRNA genes revealed CO2-correlated bacterial community shifts between treatments A, B and D. Observed bacterial community shifts were driven by decreases in the relative abundance of Alphaproteobacteria and increases of Flavobacteriales (Bacteroidetes) at increased CO2 concentrations, indicating pH sensitivity of specific bacterial groups. Elevated pCO2 (C + D) shifted biofilm algal communities and significantly increased C and N contents, yet O2 fluxes, measured using in light and dark incubations, remained unchanged. Our findings suggest that bacterial biofilm communities rapidly adapt and reorganize in response to high pCO2 to maintain activity such as oxygen production. : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne and Gattuso, 2011) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). |
format |
Dataset |
author |
Witt, Verena Wild, Christian Anthony, Kenneth R N Diaz-Pulido, Guillermo Uthicke, Sven |
author_facet |
Witt, Verena Wild, Christian Anthony, Kenneth R N Diaz-Pulido, Guillermo Uthicke, Sven |
author_sort |
Witt, Verena |
title |
Seawater carbonate chemistry, nitrogen concentration and macro community analyse, 2011, supplement to: Witt, Verena; Wild, Christian; Anthony, Kenneth R N; Diaz-Pulido, Guillermo; Uthicke, Sven (2011): Effects of ocean acidification on microbial community composition of, and oxygen fluxes through, biofilms from the Great Barrier Reef. Environmental Microbiology, 13(11), 2976-2989 |
title_short |
Seawater carbonate chemistry, nitrogen concentration and macro community analyse, 2011, supplement to: Witt, Verena; Wild, Christian; Anthony, Kenneth R N; Diaz-Pulido, Guillermo; Uthicke, Sven (2011): Effects of ocean acidification on microbial community composition of, and oxygen fluxes through, biofilms from the Great Barrier Reef. Environmental Microbiology, 13(11), 2976-2989 |
title_full |
Seawater carbonate chemistry, nitrogen concentration and macro community analyse, 2011, supplement to: Witt, Verena; Wild, Christian; Anthony, Kenneth R N; Diaz-Pulido, Guillermo; Uthicke, Sven (2011): Effects of ocean acidification on microbial community composition of, and oxygen fluxes through, biofilms from the Great Barrier Reef. Environmental Microbiology, 13(11), 2976-2989 |
title_fullStr |
Seawater carbonate chemistry, nitrogen concentration and macro community analyse, 2011, supplement to: Witt, Verena; Wild, Christian; Anthony, Kenneth R N; Diaz-Pulido, Guillermo; Uthicke, Sven (2011): Effects of ocean acidification on microbial community composition of, and oxygen fluxes through, biofilms from the Great Barrier Reef. Environmental Microbiology, 13(11), 2976-2989 |
title_full_unstemmed |
Seawater carbonate chemistry, nitrogen concentration and macro community analyse, 2011, supplement to: Witt, Verena; Wild, Christian; Anthony, Kenneth R N; Diaz-Pulido, Guillermo; Uthicke, Sven (2011): Effects of ocean acidification on microbial community composition of, and oxygen fluxes through, biofilms from the Great Barrier Reef. Environmental Microbiology, 13(11), 2976-2989 |
title_sort |
seawater carbonate chemistry, nitrogen concentration and macro community analyse, 2011, supplement to: witt, verena; wild, christian; anthony, kenneth r n; diaz-pulido, guillermo; uthicke, sven (2011): effects of ocean acidification on microbial community composition of, and oxygen fluxes through, biofilms from the great barrier reef. environmental microbiology, 13(11), 2976-2989 |
publisher |
PANGAEA - Data Publisher for Earth & Environmental Science |
publishDate |
2011 |
url |
https://dx.doi.org/10.1594/pangaea.770491 https://doi.pangaea.de/10.1594/PANGAEA.770491 |
long_lat |
ENVELOPE(-60.667,-60.667,-63.783,-63.783) ENVELOPE(-60.200,-60.200,-63.733,-63.733) |
geographic |
Diaz Pacific Sven |
geographic_facet |
Diaz Pacific Sven |
genre |
Ocean acidification |
genre_facet |
Ocean acidification |
op_relation |
https://dx.doi.org/10.1111/j.1462-2920.2011.02571.x |
op_rights |
Creative Commons Attribution 3.0 Unported https://creativecommons.org/licenses/by/3.0/legalcode cc-by-3.0 |
op_rightsnorm |
CC-BY |
op_doi |
https://doi.org/10.1594/pangaea.770491 https://doi.org/10.1111/j.1462-2920.2011.02571.x |
_version_ |
1766156586701553664 |
spelling |
ftdatacite:10.1594/pangaea.770491 2023-05-15T17:50:01+02:00 Seawater carbonate chemistry, nitrogen concentration and macro community analyse, 2011, supplement to: Witt, Verena; Wild, Christian; Anthony, Kenneth R N; Diaz-Pulido, Guillermo; Uthicke, Sven (2011): Effects of ocean acidification on microbial community composition of, and oxygen fluxes through, biofilms from the Great Barrier Reef. Environmental Microbiology, 13(11), 2976-2989 Witt, Verena Wild, Christian Anthony, Kenneth R N Diaz-Pulido, Guillermo Uthicke, Sven 2011 text/tab-separated-values https://dx.doi.org/10.1594/pangaea.770491 https://doi.pangaea.de/10.1594/PANGAEA.770491 en eng PANGAEA - Data Publisher for Earth & Environmental Science https://dx.doi.org/10.1111/j.1462-2920.2011.02571.x Creative Commons Attribution 3.0 Unported https://creativecommons.org/licenses/by/3.0/legalcode cc-by-3.0 CC-BY Benthos Biomass/Abundance/Elemental composition Bottles or small containers/Aquaria <20 L Coast and continental shelf Community composition and diversity Entire community Laboratory experiment Rocky-shore community South Pacific Temperate Experimental treatment Salinity Temperature, water pH pH, standard error Partial pressure of carbon dioxide water at sea surface temperature wet air Partial pressure of carbon dioxide water at sea surface temperature wet air, standard error Alkalinity, total Alkalinity, total, standard error Carbon, inorganic, dissolved Carbon, inorganic, dissolved, standard error Aragonite saturation state Aragonite saturation state, standard deviation Carbon, inorganic, total Carbon, inorganic, total, standard deviation Carbon, organic, total Carbon, organic, total, standard deviation Nitrogen, total Nitrogen, total, standard deviation Nitrogen, inorganic Carbon/Nitrogen ratio, standard deviation Replicates Experiment day Diatoms Algae Carbonate system computation flag Carbon dioxide Fugacity of carbon dioxide water at sea surface temperature wet air Bicarbonate ion Carbonate ion Calcite saturation state Temperature logger, Onset, UA-001 pH meter HQ10-HQ20 Meters, Hach, USA Calculated using CO2SYS Potentiometric open-cell titration Element analyser, THERMO NA 2500 TOC analyzer Shimadzu Calculated using seacarb after Nisumaa et al. 2010 European network of excellence for Ocean Ecosystems Analysis EUR-OCEANS European Project on Ocean Acidification EPOCA Ocean Acidification International Coordination Centre OA-ICC Dataset dataset Supplementary Dataset 2011 ftdatacite https://doi.org/10.1594/pangaea.770491 https://doi.org/10.1111/j.1462-2920.2011.02571.x 2022-02-09T12:27:05Z Rising anthropogenic CO2 emissions acidify the oceans, and cause changes to seawater carbon chemistry. Bacterial biofilm communities reflect environmental disturbances and may rapidly respond to ocean acidification. This study investigates community composition and activity responses to experimental ocean acidification in biofilms from the Australian Great Barrier Reef. Natural biofilms grown on glass slides were exposed for 11 d to four controlled pCO2 concentrations representing the following scenarios: A) pre-industrial (~300 ppm), B) present-day (~400 ppm), C) mid century (~560 ppm) and D) late century (~1140 ppm). Terminal restriction fragment length polymorphism and clone library analyses of 16S rRNA genes revealed CO2-correlated bacterial community shifts between treatments A, B and D. Observed bacterial community shifts were driven by decreases in the relative abundance of Alphaproteobacteria and increases of Flavobacteriales (Bacteroidetes) at increased CO2 concentrations, indicating pH sensitivity of specific bacterial groups. Elevated pCO2 (C + D) shifted biofilm algal communities and significantly increased C and N contents, yet O2 fluxes, measured using in light and dark incubations, remained unchanged. Our findings suggest that bacterial biofilm communities rapidly adapt and reorganize in response to high pCO2 to maintain activity such as oxygen production. : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne and Gattuso, 2011) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). Dataset Ocean acidification DataCite Metadata Store (German National Library of Science and Technology) Diaz ENVELOPE(-60.667,-60.667,-63.783,-63.783) Pacific Sven ENVELOPE(-60.200,-60.200,-63.733,-63.733) |