Seawater carbonate chemistry and diatom Phaeodactylum tricornutum (CCMA 106) biological processes during experiments, 2010, supplement to: Wu, YaPing; Gao, Kunshan; Riebesell, Ulf (2010): CO2-induced seawater acidification affects physiological performance of the marine diatom Phaeodactylum tricornutum. Biogeosciences, 7(9), 2915-2923
CO2/pH perturbation experiments were carried out under two different pCO2 levels (39.3 and 101.3 Pa) to evaluate effects of CO2-induced ocean acidification on the marine diatom Phaeodactylum tricornutum. After acclimation (>20 generations) to ambient and elevated CO2 conditions (with correspondin...
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Language: | English |
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PANGAEA - Data Publisher for Earth & Environmental Science
2010
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Online Access: | https://dx.doi.org/10.1594/pangaea.758214 https://doi.pangaea.de/10.1594/PANGAEA.758214 |
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openpolar |
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Open Polar |
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DataCite Metadata Store (German National Library of Science and Technology) |
op_collection_id |
ftdatacite |
language |
English |
topic |
Bottles or small containers/Aquaria <20 L Chromista Growth/Morphology Laboratory experiment Laboratory strains Not applicable Ochrophyta Pelagos Phaeodactylum tricornutum Phytoplankton Primary production/Photosynthesis Respiration Single species Experimental treatment Comment Salinity Temperature, water Carbon dioxide, partial pressure Carbon dioxide, partial pressure, standard deviation pH pH, standard deviation Carbon, inorganic, dissolved Carbon, inorganic, dissolved, standard deviation Bicarbonate ion Bicarbonate ion, standard deviation Carbonate ion Carbonate ion, standard deviation Carbon dioxide Carbon dioxide, standard deviation Alkalinity, total Alkalinity, total, standard deviation Photochemical efficiency Photochemical efficiency, standard deviation Maximum potential photosynthesis Maximum potential photosynthesis, standard deviation Light saturation point Light saturation point, standard deviation Chlorophyll a per cell Chlorophyll a, standard deviation Growth rate Growth rate, standard deviation Photosynthetic carbon fixation rate Photosynthetic carbon fixation rate, standard deviation Respiration rate, oxygen Respiration rate, oxygen, standard deviation Carbonate system computation flag Partial pressure of carbon dioxide water at sea surface temperature wet air Fugacity of carbon dioxide water at sea surface temperature wet air Aragonite saturation state Calcite saturation state Measured Infrared CO2/H2O gas analyzer, non-dispersive, LI-COR type LI-7000 pH meter Benchtop pH510, OAKTON DIC analyzer AS-C3, Apollo Scitech Calculated using CO2SYS Calculated, see references see references Spectrophotometry Calculated Liquid scintillation counter Tri-Carb 2800TR, Perkin-Elmer Clark type oxygen electrode 5300A, YSI Calculated using seacarb after Nisumaa et al. 2010 European network of excellence for Ocean Ecosystems Analysis EUR-OCEANS European Project on Ocean Acidification EPOCA Ocean Acidification International Coordination Centre OA-ICC |
spellingShingle |
Bottles or small containers/Aquaria <20 L Chromista Growth/Morphology Laboratory experiment Laboratory strains Not applicable Ochrophyta Pelagos Phaeodactylum tricornutum Phytoplankton Primary production/Photosynthesis Respiration Single species Experimental treatment Comment Salinity Temperature, water Carbon dioxide, partial pressure Carbon dioxide, partial pressure, standard deviation pH pH, standard deviation Carbon, inorganic, dissolved Carbon, inorganic, dissolved, standard deviation Bicarbonate ion Bicarbonate ion, standard deviation Carbonate ion Carbonate ion, standard deviation Carbon dioxide Carbon dioxide, standard deviation Alkalinity, total Alkalinity, total, standard deviation Photochemical efficiency Photochemical efficiency, standard deviation Maximum potential photosynthesis Maximum potential photosynthesis, standard deviation Light saturation point Light saturation point, standard deviation Chlorophyll a per cell Chlorophyll a, standard deviation Growth rate Growth rate, standard deviation Photosynthetic carbon fixation rate Photosynthetic carbon fixation rate, standard deviation Respiration rate, oxygen Respiration rate, oxygen, standard deviation Carbonate system computation flag Partial pressure of carbon dioxide water at sea surface temperature wet air Fugacity of carbon dioxide water at sea surface temperature wet air Aragonite saturation state Calcite saturation state Measured Infrared CO2/H2O gas analyzer, non-dispersive, LI-COR type LI-7000 pH meter Benchtop pH510, OAKTON DIC analyzer AS-C3, Apollo Scitech Calculated using CO2SYS Calculated, see references see references Spectrophotometry Calculated Liquid scintillation counter Tri-Carb 2800TR, Perkin-Elmer Clark type oxygen electrode 5300A, YSI Calculated using seacarb after Nisumaa et al. 2010 European network of excellence for Ocean Ecosystems Analysis EUR-OCEANS European Project on Ocean Acidification EPOCA Ocean Acidification International Coordination Centre OA-ICC Wu, YaPing Gao, Kunshan Riebesell, Ulf Seawater carbonate chemistry and diatom Phaeodactylum tricornutum (CCMA 106) biological processes during experiments, 2010, supplement to: Wu, YaPing; Gao, Kunshan; Riebesell, Ulf (2010): CO2-induced seawater acidification affects physiological performance of the marine diatom Phaeodactylum tricornutum. Biogeosciences, 7(9), 2915-2923 |
topic_facet |
Bottles or small containers/Aquaria <20 L Chromista Growth/Morphology Laboratory experiment Laboratory strains Not applicable Ochrophyta Pelagos Phaeodactylum tricornutum Phytoplankton Primary production/Photosynthesis Respiration Single species Experimental treatment Comment Salinity Temperature, water Carbon dioxide, partial pressure Carbon dioxide, partial pressure, standard deviation pH pH, standard deviation Carbon, inorganic, dissolved Carbon, inorganic, dissolved, standard deviation Bicarbonate ion Bicarbonate ion, standard deviation Carbonate ion Carbonate ion, standard deviation Carbon dioxide Carbon dioxide, standard deviation Alkalinity, total Alkalinity, total, standard deviation Photochemical efficiency Photochemical efficiency, standard deviation Maximum potential photosynthesis Maximum potential photosynthesis, standard deviation Light saturation point Light saturation point, standard deviation Chlorophyll a per cell Chlorophyll a, standard deviation Growth rate Growth rate, standard deviation Photosynthetic carbon fixation rate Photosynthetic carbon fixation rate, standard deviation Respiration rate, oxygen Respiration rate, oxygen, standard deviation Carbonate system computation flag Partial pressure of carbon dioxide water at sea surface temperature wet air Fugacity of carbon dioxide water at sea surface temperature wet air Aragonite saturation state Calcite saturation state Measured Infrared CO2/H2O gas analyzer, non-dispersive, LI-COR type LI-7000 pH meter Benchtop pH510, OAKTON DIC analyzer AS-C3, Apollo Scitech Calculated using CO2SYS Calculated, see references see references Spectrophotometry Calculated Liquid scintillation counter Tri-Carb 2800TR, Perkin-Elmer Clark type oxygen electrode 5300A, YSI Calculated using seacarb after Nisumaa et al. 2010 European network of excellence for Ocean Ecosystems Analysis EUR-OCEANS European Project on Ocean Acidification EPOCA Ocean Acidification International Coordination Centre OA-ICC |
description |
CO2/pH perturbation experiments were carried out under two different pCO2 levels (39.3 and 101.3 Pa) to evaluate effects of CO2-induced ocean acidification on the marine diatom Phaeodactylum tricornutum. After acclimation (>20 generations) to ambient and elevated CO2 conditions (with corresponding pH values of 8.15 and 7.80, respectively), growth and photosynthetic carbon fixation rates of high CO2 grown cells were enhanced by 5% and 12%, respectively, and dark respiration stimulated by 34% compared to cells grown at ambient CO2. The half saturation constant (Km) for carbon fixation (dissolved inorganic carbon, DIC) increased by 20% under the low pH and high CO2 condition, reflecting a decreased affinity for HCO3- or/and CO2 and down-regulated carbon concentrating mechanism (CCM). In the high CO2 grown cells, the electron transport rate from photosystem II (PSII) was photoinhibited to a greater extent at high levels of photosynthetically active radiation, while non-photochemical quenching was reduced compared to low CO2 grown cells. This was probably due to the down-regulation of CCM, which serves as a sink for excessive energy. The balance between these positive and negative effects on diatom productivity will be a key factor in determining the net effect of rising atmospheric CO2 on ocean primary production. : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne and Gattuso, 2011) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). |
format |
Dataset |
author |
Wu, YaPing Gao, Kunshan Riebesell, Ulf |
author_facet |
Wu, YaPing Gao, Kunshan Riebesell, Ulf |
author_sort |
Wu, YaPing |
title |
Seawater carbonate chemistry and diatom Phaeodactylum tricornutum (CCMA 106) biological processes during experiments, 2010, supplement to: Wu, YaPing; Gao, Kunshan; Riebesell, Ulf (2010): CO2-induced seawater acidification affects physiological performance of the marine diatom Phaeodactylum tricornutum. Biogeosciences, 7(9), 2915-2923 |
title_short |
Seawater carbonate chemistry and diatom Phaeodactylum tricornutum (CCMA 106) biological processes during experiments, 2010, supplement to: Wu, YaPing; Gao, Kunshan; Riebesell, Ulf (2010): CO2-induced seawater acidification affects physiological performance of the marine diatom Phaeodactylum tricornutum. Biogeosciences, 7(9), 2915-2923 |
title_full |
Seawater carbonate chemistry and diatom Phaeodactylum tricornutum (CCMA 106) biological processes during experiments, 2010, supplement to: Wu, YaPing; Gao, Kunshan; Riebesell, Ulf (2010): CO2-induced seawater acidification affects physiological performance of the marine diatom Phaeodactylum tricornutum. Biogeosciences, 7(9), 2915-2923 |
title_fullStr |
Seawater carbonate chemistry and diatom Phaeodactylum tricornutum (CCMA 106) biological processes during experiments, 2010, supplement to: Wu, YaPing; Gao, Kunshan; Riebesell, Ulf (2010): CO2-induced seawater acidification affects physiological performance of the marine diatom Phaeodactylum tricornutum. Biogeosciences, 7(9), 2915-2923 |
title_full_unstemmed |
Seawater carbonate chemistry and diatom Phaeodactylum tricornutum (CCMA 106) biological processes during experiments, 2010, supplement to: Wu, YaPing; Gao, Kunshan; Riebesell, Ulf (2010): CO2-induced seawater acidification affects physiological performance of the marine diatom Phaeodactylum tricornutum. Biogeosciences, 7(9), 2915-2923 |
title_sort |
seawater carbonate chemistry and diatom phaeodactylum tricornutum (ccma 106) biological processes during experiments, 2010, supplement to: wu, yaping; gao, kunshan; riebesell, ulf (2010): co2-induced seawater acidification affects physiological performance of the marine diatom phaeodactylum tricornutum. biogeosciences, 7(9), 2915-2923 |
publisher |
PANGAEA - Data Publisher for Earth & Environmental Science |
publishDate |
2010 |
url |
https://dx.doi.org/10.1594/pangaea.758214 https://doi.pangaea.de/10.1594/PANGAEA.758214 |
genre |
Ocean acidification |
genre_facet |
Ocean acidification |
op_relation |
https://dx.doi.org/10.5194/bg-7-2915-2010 |
op_rights |
Creative Commons Attribution 3.0 Unported https://creativecommons.org/licenses/by/3.0/legalcode cc-by-3.0 |
op_rightsnorm |
CC-BY |
op_doi |
https://doi.org/10.1594/pangaea.758214 https://doi.org/10.5194/bg-7-2915-2010 |
_version_ |
1766157532801269760 |
spelling |
ftdatacite:10.1594/pangaea.758214 2023-05-15T17:50:40+02:00 Seawater carbonate chemistry and diatom Phaeodactylum tricornutum (CCMA 106) biological processes during experiments, 2010, supplement to: Wu, YaPing; Gao, Kunshan; Riebesell, Ulf (2010): CO2-induced seawater acidification affects physiological performance of the marine diatom Phaeodactylum tricornutum. Biogeosciences, 7(9), 2915-2923 Wu, YaPing Gao, Kunshan Riebesell, Ulf 2010 text/tab-separated-values https://dx.doi.org/10.1594/pangaea.758214 https://doi.pangaea.de/10.1594/PANGAEA.758214 en eng PANGAEA - Data Publisher for Earth & Environmental Science https://dx.doi.org/10.5194/bg-7-2915-2010 Creative Commons Attribution 3.0 Unported https://creativecommons.org/licenses/by/3.0/legalcode cc-by-3.0 CC-BY Bottles or small containers/Aquaria <20 L Chromista Growth/Morphology Laboratory experiment Laboratory strains Not applicable Ochrophyta Pelagos Phaeodactylum tricornutum Phytoplankton Primary production/Photosynthesis Respiration Single species Experimental treatment Comment Salinity Temperature, water Carbon dioxide, partial pressure Carbon dioxide, partial pressure, standard deviation pH pH, standard deviation Carbon, inorganic, dissolved Carbon, inorganic, dissolved, standard deviation Bicarbonate ion Bicarbonate ion, standard deviation Carbonate ion Carbonate ion, standard deviation Carbon dioxide Carbon dioxide, standard deviation Alkalinity, total Alkalinity, total, standard deviation Photochemical efficiency Photochemical efficiency, standard deviation Maximum potential photosynthesis Maximum potential photosynthesis, standard deviation Light saturation point Light saturation point, standard deviation Chlorophyll a per cell Chlorophyll a, standard deviation Growth rate Growth rate, standard deviation Photosynthetic carbon fixation rate Photosynthetic carbon fixation rate, standard deviation Respiration rate, oxygen Respiration rate, oxygen, standard deviation Carbonate system computation flag Partial pressure of carbon dioxide water at sea surface temperature wet air Fugacity of carbon dioxide water at sea surface temperature wet air Aragonite saturation state Calcite saturation state Measured Infrared CO2/H2O gas analyzer, non-dispersive, LI-COR type LI-7000 pH meter Benchtop pH510, OAKTON DIC analyzer AS-C3, Apollo Scitech Calculated using CO2SYS Calculated, see references see references Spectrophotometry Calculated Liquid scintillation counter Tri-Carb 2800TR, Perkin-Elmer Clark type oxygen electrode 5300A, YSI Calculated using seacarb after Nisumaa et al. 2010 European network of excellence for Ocean Ecosystems Analysis EUR-OCEANS European Project on Ocean Acidification EPOCA Ocean Acidification International Coordination Centre OA-ICC Dataset dataset Supplementary Dataset 2010 ftdatacite https://doi.org/10.1594/pangaea.758214 https://doi.org/10.5194/bg-7-2915-2010 2022-02-09T12:07:01Z CO2/pH perturbation experiments were carried out under two different pCO2 levels (39.3 and 101.3 Pa) to evaluate effects of CO2-induced ocean acidification on the marine diatom Phaeodactylum tricornutum. After acclimation (>20 generations) to ambient and elevated CO2 conditions (with corresponding pH values of 8.15 and 7.80, respectively), growth and photosynthetic carbon fixation rates of high CO2 grown cells were enhanced by 5% and 12%, respectively, and dark respiration stimulated by 34% compared to cells grown at ambient CO2. The half saturation constant (Km) for carbon fixation (dissolved inorganic carbon, DIC) increased by 20% under the low pH and high CO2 condition, reflecting a decreased affinity for HCO3- or/and CO2 and down-regulated carbon concentrating mechanism (CCM). In the high CO2 grown cells, the electron transport rate from photosystem II (PSII) was photoinhibited to a greater extent at high levels of photosynthetically active radiation, while non-photochemical quenching was reduced compared to low CO2 grown cells. This was probably due to the down-regulation of CCM, which serves as a sink for excessive energy. The balance between these positive and negative effects on diatom productivity will be a key factor in determining the net effect of rising atmospheric CO2 on ocean primary production. : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne and Gattuso, 2011) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). Dataset Ocean acidification DataCite Metadata Store (German National Library of Science and Technology) |