Seawater carbonate chemistry and processes during experiments with amphipod Gammarus locusta, 2009, supplement to: Hauton, C; Tyrrell, Toby; Williams, J (2009): The subtle effects of sea water acidification on the amphipod Gammarus locusta. Biogeosciences, 6(8), 1479-1489

We report an investigation of the effects of increases in pCO2 on the survival, growth and molecular physiology of the neritic amphipod Gammarus locusta which has a cosmopolitan distribution in estuaries. Amphipods were reared from juvenile to mature adult in laboratory microcosms at three different...

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Bibliographic Details
Main Authors: Hauton, C, Tyrrell, Toby, Williams, J
Format: Dataset
Language:English
Published: PANGAEA - Data Publisher for Earth & Environmental Science 2009
Subjects:
pH
Online Access:https://dx.doi.org/10.1594/pangaea.728727
https://doi.pangaea.de/10.1594/PANGAEA.728727
id ftdatacite:10.1594/pangaea.728727
record_format openpolar
spelling ftdatacite:10.1594/pangaea.728727 2023-05-15T17:37:16+02:00 Seawater carbonate chemistry and processes during experiments with amphipod Gammarus locusta, 2009, supplement to: Hauton, C; Tyrrell, Toby; Williams, J (2009): The subtle effects of sea water acidification on the amphipod Gammarus locusta. Biogeosciences, 6(8), 1479-1489 Hauton, C Tyrrell, Toby Williams, J 2009 text/tab-separated-values https://dx.doi.org/10.1594/pangaea.728727 https://doi.pangaea.de/10.1594/PANGAEA.728727 en eng PANGAEA - Data Publisher for Earth & Environmental Science https://dx.doi.org/10.5194/bg-6-1479-2009 Creative Commons Attribution 3.0 Unported https://creativecommons.org/licenses/by/3.0/legalcode cc-by-3.0 CC-BY Animalia Arthropoda Benthos Bottles or small containers/Aquaria <20 L Coast and continental shelf Gammarus locusta Laboratory experiment Mortality/Survival North Atlantic Single species Temperate Experiment day Salinity Temperature, water LightDark cycle Carbonate system computation flag pH Alkalinity, total Carbon, inorganic, dissolved Carbon dioxide Partial pressure of carbon dioxide water at sea surface temperature wet air Fugacity of carbon dioxide water at sea surface temperature wet air Bicarbonate ion Carbonate ion Aragonite saturation state Calcite saturation state Gammarus locusta, survival Conductivity meter WTW, Weilheim, Gemany Measured Calculated using seacarb after Nisumaa et al. 2010 SevenMulti pH meter Mettler, Schwerzenbach, Switzerland VINIDTA 3C instrument Miranda, Kiel, Germany European network of excellence for Ocean Ecosystems Analysis EUR-OCEANS European Project on Ocean Acidification EPOCA Ocean Acidification International Coordination Centre OA-ICC Dataset dataset Supplementary Dataset 2009 ftdatacite https://doi.org/10.1594/pangaea.728727 https://doi.org/10.5194/bg-6-1479-2009 2022-02-09T12:07:01Z We report an investigation of the effects of increases in pCO2 on the survival, growth and molecular physiology of the neritic amphipod Gammarus locusta which has a cosmopolitan distribution in estuaries. Amphipods were reared from juvenile to mature adult in laboratory microcosms at three different levels of pH in nominal range 8.1-7.6. Growth rate was estimated from weekly measures of body length. At sexual maturity the amphipods were sacrificed and assayed for changes in the expression of genes coding for a heat shock protein (hsp70 gene) and the metabolic enzyme glyceraldehyde-3-phosphate dehydrogenase (gapdh gene). The data show that the growth and survival of this species is not significantly impacted by a decrease in sea water pH of up to 0.5 units. Quantitative real-time PCR analysis indicated that there was no significant effect of growth in acidified sea water on the sustained expression of the hsp70 gene. There was a consistent and significant increase in the expression of the gapdh gene at a pH of ~7.5 which, when combined with observations from other workers, suggests that metabolic changes may occur in response to acidification. It is concluded that sensitive assays of tissue physiology and molecular biology should be routinely employed in future studies of the impacts of sea water acidification as subtle effects on the physiology and metabolism of coastal marine species may be overlooked in conventional gross "end-point" studies of organism growth or mortality. : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne and Gattuso, 2011) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). Dataset North Atlantic Ocean acidification DataCite Metadata Store (German National Library of Science and Technology) Tyrrell ENVELOPE(-69.512,-69.512,-69.634,-69.634)
institution Open Polar
collection DataCite Metadata Store (German National Library of Science and Technology)
op_collection_id ftdatacite
language English
topic Animalia
Arthropoda
Benthos
Bottles or small containers/Aquaria <20 L
Coast and continental shelf
Gammarus locusta
Laboratory experiment
Mortality/Survival
North Atlantic
Single species
Temperate
Experiment day
Salinity
Temperature, water
LightDark cycle
Carbonate system computation flag
pH
Alkalinity, total
Carbon, inorganic, dissolved
Carbon dioxide
Partial pressure of carbon dioxide water at sea surface temperature wet air
Fugacity of carbon dioxide water at sea surface temperature wet air
Bicarbonate ion
Carbonate ion
Aragonite saturation state
Calcite saturation state
Gammarus locusta, survival
Conductivity meter WTW, Weilheim, Gemany
Measured
Calculated using seacarb after Nisumaa et al. 2010
SevenMulti pH meter Mettler, Schwerzenbach, Switzerland
VINIDTA 3C instrument Miranda, Kiel, Germany
European network of excellence for Ocean Ecosystems Analysis EUR-OCEANS
European Project on Ocean Acidification EPOCA
Ocean Acidification International Coordination Centre OA-ICC
spellingShingle Animalia
Arthropoda
Benthos
Bottles or small containers/Aquaria <20 L
Coast and continental shelf
Gammarus locusta
Laboratory experiment
Mortality/Survival
North Atlantic
Single species
Temperate
Experiment day
Salinity
Temperature, water
LightDark cycle
Carbonate system computation flag
pH
Alkalinity, total
Carbon, inorganic, dissolved
Carbon dioxide
Partial pressure of carbon dioxide water at sea surface temperature wet air
Fugacity of carbon dioxide water at sea surface temperature wet air
Bicarbonate ion
Carbonate ion
Aragonite saturation state
Calcite saturation state
Gammarus locusta, survival
Conductivity meter WTW, Weilheim, Gemany
Measured
Calculated using seacarb after Nisumaa et al. 2010
SevenMulti pH meter Mettler, Schwerzenbach, Switzerland
VINIDTA 3C instrument Miranda, Kiel, Germany
European network of excellence for Ocean Ecosystems Analysis EUR-OCEANS
European Project on Ocean Acidification EPOCA
Ocean Acidification International Coordination Centre OA-ICC
Hauton, C
Tyrrell, Toby
Williams, J
Seawater carbonate chemistry and processes during experiments with amphipod Gammarus locusta, 2009, supplement to: Hauton, C; Tyrrell, Toby; Williams, J (2009): The subtle effects of sea water acidification on the amphipod Gammarus locusta. Biogeosciences, 6(8), 1479-1489
topic_facet Animalia
Arthropoda
Benthos
Bottles or small containers/Aquaria <20 L
Coast and continental shelf
Gammarus locusta
Laboratory experiment
Mortality/Survival
North Atlantic
Single species
Temperate
Experiment day
Salinity
Temperature, water
LightDark cycle
Carbonate system computation flag
pH
Alkalinity, total
Carbon, inorganic, dissolved
Carbon dioxide
Partial pressure of carbon dioxide water at sea surface temperature wet air
Fugacity of carbon dioxide water at sea surface temperature wet air
Bicarbonate ion
Carbonate ion
Aragonite saturation state
Calcite saturation state
Gammarus locusta, survival
Conductivity meter WTW, Weilheim, Gemany
Measured
Calculated using seacarb after Nisumaa et al. 2010
SevenMulti pH meter Mettler, Schwerzenbach, Switzerland
VINIDTA 3C instrument Miranda, Kiel, Germany
European network of excellence for Ocean Ecosystems Analysis EUR-OCEANS
European Project on Ocean Acidification EPOCA
Ocean Acidification International Coordination Centre OA-ICC
description We report an investigation of the effects of increases in pCO2 on the survival, growth and molecular physiology of the neritic amphipod Gammarus locusta which has a cosmopolitan distribution in estuaries. Amphipods were reared from juvenile to mature adult in laboratory microcosms at three different levels of pH in nominal range 8.1-7.6. Growth rate was estimated from weekly measures of body length. At sexual maturity the amphipods were sacrificed and assayed for changes in the expression of genes coding for a heat shock protein (hsp70 gene) and the metabolic enzyme glyceraldehyde-3-phosphate dehydrogenase (gapdh gene). The data show that the growth and survival of this species is not significantly impacted by a decrease in sea water pH of up to 0.5 units. Quantitative real-time PCR analysis indicated that there was no significant effect of growth in acidified sea water on the sustained expression of the hsp70 gene. There was a consistent and significant increase in the expression of the gapdh gene at a pH of ~7.5 which, when combined with observations from other workers, suggests that metabolic changes may occur in response to acidification. It is concluded that sensitive assays of tissue physiology and molecular biology should be routinely employed in future studies of the impacts of sea water acidification as subtle effects on the physiology and metabolism of coastal marine species may be overlooked in conventional gross "end-point" studies of organism growth or mortality. : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne and Gattuso, 2011) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI).
format Dataset
author Hauton, C
Tyrrell, Toby
Williams, J
author_facet Hauton, C
Tyrrell, Toby
Williams, J
author_sort Hauton, C
title Seawater carbonate chemistry and processes during experiments with amphipod Gammarus locusta, 2009, supplement to: Hauton, C; Tyrrell, Toby; Williams, J (2009): The subtle effects of sea water acidification on the amphipod Gammarus locusta. Biogeosciences, 6(8), 1479-1489
title_short Seawater carbonate chemistry and processes during experiments with amphipod Gammarus locusta, 2009, supplement to: Hauton, C; Tyrrell, Toby; Williams, J (2009): The subtle effects of sea water acidification on the amphipod Gammarus locusta. Biogeosciences, 6(8), 1479-1489
title_full Seawater carbonate chemistry and processes during experiments with amphipod Gammarus locusta, 2009, supplement to: Hauton, C; Tyrrell, Toby; Williams, J (2009): The subtle effects of sea water acidification on the amphipod Gammarus locusta. Biogeosciences, 6(8), 1479-1489
title_fullStr Seawater carbonate chemistry and processes during experiments with amphipod Gammarus locusta, 2009, supplement to: Hauton, C; Tyrrell, Toby; Williams, J (2009): The subtle effects of sea water acidification on the amphipod Gammarus locusta. Biogeosciences, 6(8), 1479-1489
title_full_unstemmed Seawater carbonate chemistry and processes during experiments with amphipod Gammarus locusta, 2009, supplement to: Hauton, C; Tyrrell, Toby; Williams, J (2009): The subtle effects of sea water acidification on the amphipod Gammarus locusta. Biogeosciences, 6(8), 1479-1489
title_sort seawater carbonate chemistry and processes during experiments with amphipod gammarus locusta, 2009, supplement to: hauton, c; tyrrell, toby; williams, j (2009): the subtle effects of sea water acidification on the amphipod gammarus locusta. biogeosciences, 6(8), 1479-1489
publisher PANGAEA - Data Publisher for Earth & Environmental Science
publishDate 2009
url https://dx.doi.org/10.1594/pangaea.728727
https://doi.pangaea.de/10.1594/PANGAEA.728727
long_lat ENVELOPE(-69.512,-69.512,-69.634,-69.634)
geographic Tyrrell
geographic_facet Tyrrell
genre North Atlantic
Ocean acidification
genre_facet North Atlantic
Ocean acidification
op_relation https://dx.doi.org/10.5194/bg-6-1479-2009
op_rights Creative Commons Attribution 3.0 Unported
https://creativecommons.org/licenses/by/3.0/legalcode
cc-by-3.0
op_rightsnorm CC-BY
op_doi https://doi.org/10.1594/pangaea.728727
https://doi.org/10.5194/bg-6-1479-2009
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