Occurrence Download
A dataset containing 36839 species occurrences available in GBIF matching the query: { "TaxonKey" : [ "is Vibrio Pacini, 1954" ] } The dataset includes 36839 records from 561 constituent datasets: 1 records from Surfactant-associated bacteria in the near-surface layer of the ocea...
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| Format: | Dataset |
| Language: | unknown |
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The Global Biodiversity Information Facility
2021
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| Online Access: | https://dx.doi.org/10.15468/dl.daygbc https://www.gbif.org/occurrence/download/0005709-210819072339941 |
| Summary: | A dataset containing 36839 species occurrences available in GBIF matching the query: { "TaxonKey" : [ "is Vibrio Pacini, 1954" ] } The dataset includes 36839 records from 561 constituent datasets: 1 records from Surfactant-associated bacteria in the near-surface layer of the ocean. 30 records from Po river Prodelta and Mar Piccolo of Taranto surface sediments bacterial communities targeted loci. 5 records from eDNA_Subseafloor. 27 records from Abyssal Baseline Study & Geophysical Survey (ABYSSLINE 02)_AB01_Re-sequenced Targeted loci environmental. 3 records from Marine methane seep Targeted Locus (Loci). 23 records from marine sediment metagenome Metagenome. 12 records from Incubation of marine methane seep sediments with a bioorthogonal amino acid. 1 records from PREsediment Targeted Locus (Loci). 6 records from Microbial ecology of archaeal community in sediment from adjacent waters of Rushan Bay. 11 records from Microbial community structure is affected by cropping sequences and bio-covers under long-term no-tillage. 1 records from Vertical profiles of bacterial community diversity in a drinking water reservoir. 4 records from Compost microbe establishment and growth in agricultural soils. 2 records from Estudio de la microflora de los suelos de la zona de preservación ecológica 'La Uva' (Sinaloa) con vegetación de selva baja caducifolia empleando taxonomía molecular. 10 records from Effects of organic matter manipulation on archaeal, bacterial, and fungal community assembly. 2 records from Collective List of Descriptions about Bacterial Isolates from Korea. 13 records from coastal sediment diversity study. 11 records from marine sediment metagenome Raw sequence reads. 152 records from Bacteria community in the southern East China Sea. 183 records from Metabarcoding surveys of the Arctic marine environment. 37 records from Coastal Sediment Bacterial Community Alterations in Association with Sudden Vegetation Dieback. 1 records from Marine Metagenome. 90 records from DSMZ Bacteria. 1 records from Study of microbial diversity from sediment samples of the SaiGon-DongNai system. 3 records from Microbial communities in deep eastern Mediterranean Sea surface sediments. 2 records from Loihi Seamount Targeted loci environmental. 1 records from Bacterial 16S rRNA gene sequencing of Antarctic soil. 1 records from Atlantic salmon microbiota. 18 records from IFO Bacteria database. 12 records from 16s data marine community of L4 station. 12 records from The Indigo Project: a global citizen science Ocean survey. 3 records from pyrosequencing Raw sequence reads of deep-sea Archaea. 4 records from 16S rRNA metagenomic investigation of arsenotrophic bacteriome of ground water and soil from arsenic-prone area of Bangladesh. 15 records from Microbial community structure and dynamics in the oxygen minimum zone of the Northeast subarctic Pacific Ocean. 107 records from Bacteria Collection in BCRC. 1 records from Metagenomics Cabo Rojo Salterns. 1 records from Mid-Atlantic Ridge sediment Raw sequence reads. 4 records from Temporal variation in pesticide biodegradation. 607 records from Vibrio-specific 16S rRNA sequences from seawater, sediment, and oyster hatchery samples. 73 records from North Pacific Subtropical Gyre Microbial Community. 23 records from Seawater Targeted Locus (Loci). 41 records from Herbicide-incubated GBR lagoon microbiomes Targeted loci environmental. 181 records from Macroalgal Morphology affects composition and settlement of microbial communities. 1 records from Spatially differing bacterial communities in water columns of the northern Baltic Sea. 13 records from Salt Marsh Sediments Raw sequence reads. 10 records from Arctic microbiome along Svalbard Cross Shelf transects. 29 records from Assessing the effects of salmon farming seabed enrichment using bacterial community diversity and high throughput sequencing. 10 records from Estudio de la Diversidad de Microorganismos de Ambientes Termales y Salinos de la Región Andina Central de Colombia. 2 records from Bacerial and archaeal diversity in Central Park. 51 records from Microbial diversity in the Tongyeong-Geoje coastal area of Korea. 23 records from Bacterial communities from the water column and the surface sediments along a transect in the East Sea (Sea of Japan). 1 records from Ecología de comunidades microbianas en las aguas subterráneas de Cuatrociénegas, Coahuila. 18 records from AllDist Targeted Locus (Loci). 85 records from Marine metagenome Targeted loci environmental. 12 records from Prokaryotic community response to microalgal lysates. 5 records from Protists community in the southern East China Sea. 31 records from Effect of size fractionation and DNA extraction on the diversity and composition of prokaryotic and eukaryotic plankton community. 1 records from Enhanced pyrene and benzo[a]pyrene degradation by plant root and SMFC. 1 records from XRCWD sediment metagenome Metagenome. 7 records from Diet analysis of Japanese sardine and Pacific round herring larvae. 2 records from sediment metagenome Metagenome. 1 records from Specialists instead of generalists oxidize alkanes in anoxic marine hydrocarbon seep sediments. 7 records from Species-specific associations between bacterioplankton and photosynthetic picoeukaryotes. 2 records from Lonar sediment Raw sequence reads. 2 records from Core MV1012-46.9-JPC2 aDNA metagenomes and negative control. 21 records from Microbial community in marine sediments. 31 records from Spirulina necromass degradartion in arctic marine sediments. 37 records from Oceanic microplankton do not adhere to the latitudinal diversity gradient. 1211 records from Actualización de la Colección de Microorganismos de importancia acuática. 21 records from Japan Collection of Microorganisms(Bacteria). 3 records from magnetite Targeted Locus (Loci). 34 records from Biogeography of coastal wetland bacterial communities experiencing sudden vegetation dieoff. 46 records from Equatorial Pacific Ocean Targeted loci environmental. 4 records from suspended particulate matter Raw sequence reads. 16 records from Localized impact of aquaculture effluent on Red Sea coral reef water nutrients and microorganisms. 1 records from Microbial diversity of Oslo Fjord Pockmark sediments. 279 records from EMOSE (2017) Inter-Comparison of Marine Plankton Metagenome Analysis Methods. 2 records from Vertical stratification of microbial communities in the Red Sea revealed by 16S rDNA pyrosequencing. 12 records from 16S sequencing of environmental samples to test the impact of sediment source. 8 records from Taxonomic composition of microbial communities in coastal Arctic sediments. 1 records from marine sediment metagenome Metagenomic assembly. 45 records from Metagenome from mudbank Area,Alappuzha Kerala India. 11 records from Groundwater microbiome. 1 records from Plankton&BenthosResearch. 4 records from FBIP: Diversities of microbiomes from South African arid and natural soils. 212 records from Reciprocal transplantation experiment of salt marsh sediments Targeted loci. 6 records from MiSeq 16S rRNA gene (prokaryotic 16S rRNA gene) sequences of 16 SCS sediments. 90 records from Composition and Genetic Diversity of Microbial Communities in Subtropical Coastal Wetland Sediments. 54 records from CCA_pathobiome. 194 records from Little Sippewissett Marsh Targeted Locus (Loci). 1 records from Sewer sediments Targeted loci environmental. 1 records from sediment metagenome Metagenome. 3 records from Microbial community diversity in Arctic marine sediments and Planktonic microbial. 1 records from Ocean sediment-basement interface Targeted Locus (Loci). 10 records from Comparative analysis of bacterial community-metagenomics in coastal Gulf of Mexico sediment microcosms following exposure to Macondo oil (MC252). 1 records from CABI Bioscience Genetic Resource Collection. 10 records from marine sediment metagenome Raw sequence reads. 6 records from Bacterial Biomarkers of Marcellus Shale Activity in Pennsylvania. 14 records from Oil-water intephase microbial community analysis Raw sequence reads. 11 records from Benham Rise 16S raw sequence reads. 13 records from 16S amplicons New Zealand agricultural soils. 278 records from marine metagenome Metagenome. 297 records from Impacts of crude oil and chemical dispersant exposure on marine microbial biofilm formation and steel corrosion. 2 records from XRM sediment metagenome Metagenome. 89 records from Microbial diversity in the Benguela coastal upwelling system as derived from 16S rRNA sequencing and RNA Stable Isotope Probing (SIP). 3 records from Minor impact of ocean acidification to the structure of an Arctic sediment microbial community. 152 records from Bacterial communitiy compositions on natural and artificial substrates in the Spermonde Archipelago, Indonesia. 4 records from Sediment metagenome. 3 records from ARMS Jeddah sample Raw sequence reads. 76 records from Microbial communities associated with Eurasian watermilfoil, water and sediment. 3 records from water sample Raw sequence reads. 268 records from Future climate change affects the microbiome and condition of habitat-forming kelp. 8 records from Bermuda Atlantic Time-series Study metagenomes. 20 records from Marine bacteria metagenome. 120 records from Microbial diversity in the Tongyeong-Geoje coastal area of Korea2. 1 records from Shallow-water pockmarks diversity Targeted Locus (Loci). 16 records from Submarine Ligurian Canyons Water Prokaryotic and Protist Communities. 51 records from Seawater bacteria Metagenome. 3 records from 13C methanol SIP (WCO station L4). 2 records from marine sediment metagenome Raw sequence reads. 33 records from 16S rRNA amplicon from marine Bacteria Raw sequence reads. 97 records from Life in a toxic environment. 24 records from Polyamine-transforming bacterioplankton in seawater. 4 records from Microbial community structure of chronically polluted marine sediments from a cold region of the southern hemisphere. 1 records from DOW-2. 3 records from Identification and activity of acetate-assimilating microorganisms in diffuse hydrothermal fluids. 4 records from Microbial community in on-site tsunami sediment caused by the Great East Japan Earthquake. 68 records from Sediment surface microbial community changes due to phytoplankton addition. 54 records from Temporal effect of plant diversity and oiling on nitrogen cycling in marsh sediments. 6 records from Global Malaspina 2010 deep ocean expedition - rRNA pyrotags. 15 records from Diversities of bacteria and archaea in Sanya mangrove sediments. 13 records from Microbial communities in the phycosphere environment. 19 records from Seawater metagenome Targeted loci environmental. 32 records from Effects of triclosan on bacterial community composition in natural seawater microcosms. 2 records from Indian_sediments. 33 records from peptide incubation in GOM C6 seawater bacteria Metagenome. 1 records from Porcupine Seabight 16S Ribosomal RNA. 8 records from Municipal Pensacola Beach Sand Metagenome. 3 records from Soil microbial distribution. 1 records from ZRD sediment metagenome Metagenome. 481 records from flora & fauna(NIBR). 16 records from marine sediment metagenome Raw sequence reads. 1 records from soil bacteria and fungi Targeted loci environmental. 15 records from Nuunat- ORMS formation during oil biodegradation at low temperature. 7 records from Microbial ecology of bacteiral community in sediment from adjacent waters of Rushan Bay. 2 records from Red Sea Zooplankton Raw sequence reads. 3 records from De novo whole metagenome sequencing studies. 1 records from Bacterial community composition in the naturally iron-fertilized region off Kerguelen Island (Southern Ocean). Targeted Locus (Loci). 3 records from Marine waters Raw sequence reads. 9 records from Coastal eutrophication controls the bacterial community composition in different reef habitats of the Spermonde Archipelago, Indonesia.. 15 records from Diversity and abundance of Bathyarchaeota (MCG) in South China Sea sediments and the implication of its ecological roles. 1 records from Thermophilic endospores in temperate sediments. 96 records from Bacterial Biogeography of Coastal Water in the Northern East China Sea. 4 records from seawater metagenome Metagenome. 35 records from Baselines Initiative 16S rRNA gene dataset: Baselines Amplicon Release 1 (R1) Indian Ocean 2015. 1 records from Geotraces Raw sequence reads. 89 records from Comparative 16S analysis of hydrothermal vent samples from the Mid-Atlantic Ridge (MAR). 42 records from Northern Gulf of Mexico Hypoxic Zone Raw sequence reads. 3 records from Whale fall. 1 records from Sinking bloom influences benthic microorganisms. 8 records from Prince Edward Island marine metgenome Raw sequence reads. 2 records from Microbial communities of methane seeps in shallow, porous sands off Elba. 8 records from 16S and 18S sequences from the epiphytic biofilm on leaves of Enhalus acroides. 61 records from Seasonal and spatial diversity of bacterial communities in marine sediments of Ningbo Xiangshan Coastal Ocean. 33 records from Microbial diversity associated with copepods in the North Atlantic subtropical gyre. 59 records from Polymetallic nodule field Targeted loci environmental. 1 records from microbial communities in long-term e-waste contaminated river sediments. 1 records from XRCWU sediment metagenome Metagenome. 1 records from Impact of offshore oil drilling operations on the diversity of marine benthic Foraminifera - Raw sequence reads. 1 records from Enrichment metagenome. 28 records from Heterogeneity of methane seep microbiomes in the NE Pacific. 80 records from Japan Collection of Microorganisms, RIKEN BioResource Center. 1 records from Mediterranean mud volcano flow Targeted loci. 3 records from Sequences obtained from two sponge genera (Hyrtios, Aiolochroia), one zoanthid (Palythoa), and marine sediments. Metagenome. 31 records from ATCC Bacteria Collection Catalog. 2 records from marine sediment metagenome Targeted loci environmental. 3 records from South China Sea interfaces 16S amplicon sequencing. 6 records from Bacterial population dynamics in a natural assemblage upon the addition of artificial alginate particles and alginolytic Alteromonas macleodii. 11 records from Marine sediment metagenome. 28 records from CCUG Microorganisms databases(Bacteria). 4 records from Bacterial community diverisity. 12 records from Metagenomes of Sediments from Red Sea Atlantis II and Discovery Deep Brine Pools. 12 records from DDCA-metagenome. 22 records from marine sediment metagenome Targeted loci environmental. 6 records from Fiocruz/CBAS - Coleção de Bactérias do Ambiente e Saúde. 95 records from Successional trajectories of coastal bacterioplankton communities in response to co-exposure of cadmium and phenanthrene. 4 records from Marine plankton Metagenome. 2 records from Sea ice and seawater Raw sequence reads. 7 records from International Collection of Microorganisms from Plants (ICMP). 5 records from Arctic first-year drift ice and under-ice water bacterial communities. 12 records from Enrichment of abundant sedimentary Bathyarchaeota demonstrating organoautotrophic metabolic capabilities. 393 records from Biological Impacts of Ocean Acidification. 4 records from Distinctive Microbial Community Structure in Highly Stratified Deep-Sea Brine Water Columns. 13 records from Marine Samples Targeted Locus (Loci). 14 records from coastal suspended particulate matter North Sea surface Raw sequence reads. 14 records from Colección de Microorganismos-Pontificia Universidad Javeriana. 13 records from Bacterial diversity in the South Adriatic Sea during winter of 2016. 20 records from marine sediment metagenome Raw sequence reads. 1 records from Bacterial communities in agricultural soils under contrasting agronomic managements and biomes of Argentina. 1 records from seawater metagenome Metagenome. 1 records from 16S rRNA amplicon sequences of Baltic Sea bacterioplankton. 2 records from Tucurui_Metagenoma_MGRAST. 5 records from UK coast natural seawater Genome sequencing. 5 records from 16S rRNA sequences of bacterioplankton spatial distributions in the Baltic Proper. 4 records from Evaluation of filtration and DNA extraction methods for environmental DNA biodiversity assessments across multiple trophic levels.. 30 records from Queensland Marine Sediment. 2 records from gas hydrate bearing sediment Raw sequence reads. 5 records from Salt marshes sediment microhabitats Metagenome. 3 records from Caracterización bacteriana del Distrito Nacional de Manejo Integrado Cabo Manglares Bajo Mira y Frontera, Pacífico colombiano - Proyecto Colombia BIO. 1 records from Marine sediment amplicon Targeted loci environmental. 2 records from Microbial diversity before and after tidal re-instatement. 3 records from Sea microbial community Metagenome. 23 records from Camargue soil and sediment 16S community profiling. 2 records from Soil microbial diversity in the Maintenance of Exotic vs. Native Diversity experiment (depth study). 93 records from Xylophaga in situ Eclusion Experiment. 18 records from marine metagenome Raw sequence reads. 15 records from Santa Barbara Basin Raw sequence reads. 2 records from archaeal community in Haima cold seep in SCS. 1 records from 16S rRNA metagenomic investigation of arsenotrophic bacteriome of ground water and soil from arsenic-prone area of Bangladesh. 11 records from atmospheric depositon effect on bacterial diversity. 1 records from marine metagenome. 9 records from Newfoundland sediment pyrosequencing. 9 records from Microbial communities associated with ferromanganese nodules and the surrounding sediments. 30 records from This workpackage details only the prokaryote (Archaea and Bacteria) analyses for the MicroPolar project.. 1 records from 1)sediments; 2) coral floc Metagenome. 5 records from marine sediment metagenome Raw sequence reads. 28 records from Natural seawater bacterial community in exopolysaccharides utilization. 1 records from Microbial community in permeable intertidal sediment. 16 records from Seawater free living bacterioplankton. 1 records from Cave sediment Metagenome. 28 records from photoautotrophic_biofilm. 1 records from Occurrence de vecteurs de maladies recensés à l'Hôpital de Zone Ouidah-Kpomassè-Tori. 3 records from Marine Sediment Targeted Locus. 1 records from Characterization of bacterial communities associated With toxic Dinoflagellates: pyrodinium bahamense Var. compressum. 2 records from Sea water sample Targeted Locus (Loci). 20 records from Microbial diversity and skin mucosal microbiota in farmed Atlantic salmon with ulcerative disorders, raw sequence reads. 5 records from surface sediment Raw sequence reads. 8 records from Microbial indicators of anthropogenic marine pollution identified by 16S and 18S metagenomic library analysis. 15 records from Lake sediment sequencing. 106 records from Microbial diversity in the Tongyeong-Geoje coastal area of Korea. 2 records from Nitrogen cycling microbes in the surface sediments of the South China Sea. 7 records from Habitat and host related variation in sponge bacterial communities in Indonesian coral reefs and marine lakes. 7 records from 16S marine bacteria Raw sequence reads MEDEA2. 32 records from Trichodesmium spiralis associated microbiome Targeted loci. 10 records from Saltern microbial community diversity. 46 records from Microbial associations in temperate marine copepods from the Gulf of Maine. 1 records from Mudflat sediment Metagenome. 11 records from Baltic Sea high-frequency temporal study 2012 at the Linnaeus Microbial Observatory Targeted Locus (Loci). 1 records from Benthic Ocean Acidification. 3 records from ZRCWD sediment metagenome Metagenome. 13 records from microbial diversity Raw sequence reads. 2 records from Raw sequence reads from soil relic DNA study. 10 records from sea water bacteria Raw sequence reads. 15 records from resuscitation mechanisms during enrichment culture. 16 records from Marine sediment microbial communities in the presence of macrophytes. 27 records from Marine bacteria Targeted Locus (Loci). 9 records from Rifle sediment bacterial community Targeted Locus (Loci). 4 records from Metagenomics of Jacarepagua Lagoon. 1 records from Arctic benthos Targeted Locus (Loci). 51 records from Standard filtration practices significantly distort planktonic microbial diversity estimates. 43 records from Marine sediment Raw sequence reads. 1 records from Bacterial diversity in snow from mid-latitude mountain areas: Alps, Eastern Anatolia, Karakoram and Himalaya.. 3 records from Bacterias y Arqueas de la transición Andino-Amazónica del departamento del Caquetá - Proyecto Colombia BIO. 5 records from seawater metagenome Genome sequencing and assembly. 36 records from Mariana and Kermadec Trench sediment 16S rRNA gene sequencing. 13 records from seawater bacterial community Raw sequence reads. 14 records from PAH-contaminated sediment from the Lagos Lagoon, Nigeria. 113 records from ADDOMEx. 32 records from Coral or reef-seawater associated bacteria Targeted Locus (Loci). 9 records from marine metagenome Raw sequence reads. 1 records from Eukaryote diversity assessment of sediments of the Western English Channel. 107 records from Mediterranean Contaminated Pelagic communities. 105 records from ADDOMEx Tier 3 Experiments: Mesocosm Si with Gulf of Mexico coastal waters. 2 records from Hypersaline sapropels Targeted loci environmental. 3 records from Enrichment of abundant sedimentary Bathyarchaeota demonstrating organoautotrophic metabolic capabilities. 11 records from MeHg Coal Ash. 4 records from Non-target effects of Metarhizium brunneum on soil microbial communities. 82 records from Marine Sediment from the Berkeley Bay Targeted Locus (Loci). 17 records from Chandeleur Island 2016 Amplicon Study Raw sequence reads. 73 records from Microbial biogeography of 925 geothermal springs in New Zealand. 7 records from Time course change of microbial community in tsunami sediment caused by the Great East Japan Earthquake. 21 records from marine Archaea metagenome. 133 records from Centre de Ressources Biologiques de l'Institut Pasteur. 1 records from Shotgun Metagenomic Sequencing of the Arctic Ocean during Winter-Spring Transition. 41 records from Pelagic Gulf of Mexico Targeted loci environmental. 1 records from VAG Mine Pit Pond Metagenome. 3 records from PCE/TCE dechlorinating microbial community and dehalogenase genes from Wonju Stream, South Korea. 1 records from Socompa Lake Stromatolite Shotgun Metagenomic Sequencing. 6 records from Metagenomic investigation of the coastal region of south Gujarat using soil sample - Nargol, Umargam and Dandi. 19 records from Assessing the microbial diversity in Cape Comorin ocean water. 3 records from Amplicon sequences from naphthalene biodegradation in Arctic and temperate seawater. 1 records from Actualización de la base de datos de la Colección nacional mexicana de cultivos microbianos. 1 records from Microbial processes in iron-rich sediments of Lake Towuti, Indonesia: Disentangling the methane and iron cycles. 22 records from 16S amplicons Subtropical Frontal Zone New Zealand. 12 records from Gulf of Mexico open ocean Targeted Locus (Loci). 1 records from SMAR-T Raw sequence reads. 12 records from Sea water microorganisms Raw sequence reads. 19 records from Taxonomic study of endospores in a marine sediment. 5 records from seawater metagenome Raw sequence reads. 2 records from Northern Gulf of Mexico Hypoxia can Alter Sediment Communities of Nitrifying Archaea. 28 records from Occurrences de vecteurs de maladies recensées à l'Hôpital de Mènontin. 1 records from Distribution and composition of thiotrophic mats in the hypoxic zone of the Black Sea (150-170m water depth, Crimea margin). 2 records from ocean bacteria Metagenomic assembly. 172 records from Nutrient addition mesocosm experiment Targeted Locus (Loci). 1 records from Swan lake bacteria Raw sequence reads. 71 records from Marine methane seep Targeted Locus (Loci). 17 records from Spatial variation of bacterioplankton in south Atlantic Bight. 11 records from Microbial communities associated with Juncus roemerianus and Spartina alterniflora vegetated sediments in Louisiana saltmarshes. 6 records from Microbial community structure or iron oxyhydroxides rich mound in Satsuma Iwo-jima, Japan. 2 records from Tyne oil spill snorkels Raw sequence reads. 254 records from Zostera Marina Ammonification environmental. 16 records from Organic agricultural field soil Raw sequence reads. 4 records from Canada Basin Metagenome. 2592 records from Geographically tagged INSDC sequences. 265 records from Bacterial 16s Amplicon Sequencing of the Atlantic Ocean. 58 records from Temporal dynamics of bacterioplankton community in response to excessive nitrate loading in the oligotrophic coastal water. 23 records from Coral Spawn Degradation, Bocas del Toro, Panama - Raw sequence reads. 2 records from Bacteria Metagenome. 7 records from Baselines Initiative 16S rRNA gene dataset: Baselines Amplicon Release 1 (R1) North Pacific Line-67 2009. 20 records from Gulf Oil Spill underwater oil plume samples Targeted Locus (Loci). 1 records from 2011 depth sediment Metagenome. 11 records from Abundance, diversity and distribution of Legionellales in wet environments in Sweden. 2 records from Diversity and abundance of Bathyarchaeota (MCG) in South China Sea sediments and the implication of its ecological roles. 1 records from A comparison of microbial community composition in four contrasting sediments in the Celtic Sea. 5 records from SOLA Raw sequence reads. 3 records from May 2013 DNA-SIP marine seawater bacteria metagenomic assembly. 25 records from Exploring Fronts With Multiple Robots Schmidt Ocean Institute Cruise to the Pacific Ocean in 2018. 30 records from North Sea plastic incubation and reference communities, raw sequence reads. 38 records from seawater metagenome. 3 records from Global Ocean Sampling Expedition. 54 records from Evidence of bacterioplankton community adaption in responses to long-term mariculture disturbance. 29 records from Baselines Initiative 16S rRNA gene dataset: Baselines Amplicon Release 1 (R1) Caribbean Sea near Curacao (including saline pond samples in Curacao) 2015. 9 records from Bacterial communities in sandy sediment at submarine volcanic vents off Panarea Island (Italy). 1 records from Marine metagenome ICM_JRV. 9 records from particle-attached and free-living bacteria kongsfjorden. 1 records from AT26-10 Crab Spa IGT incubations raw sequence reads. 37 records from Saltern of Margherita di Savoia Metagenome. 2 records from South China Normal University mangrove sediment Targeted Locus (Loci). 460 records from DEEPEND: Microbiome and bacterioplankton rRNA gene sequence data collected from Gulf of Mexico seawater samples. Cruises DP03 and DP04 from Jan 2016 - December 2016. 10 records from Bacterial community dynamics during polysaccharide degradation at contrasting sites in the Southern and Atlantic Oceans. 47 records from US East Coast Salt Marshes Targeted Locus (Loci). 4 records from Who eats the tough stuff DNA stable isotope probing (SIP) of bacteria and fungi degrading 13C-labelled lignin and cellulose in forest soils. 1 records from Zooplankton communities in the coastal water of northeastern Hokkaido. 1 records from Mud volcano Metagenome. 1 records from permafrost metagenome Targeted loci environmental. 1 records from Abalone seed nursing ecosystem Metagenome. 10 records from CTD water column metabarcoding. 11 records from marine sediment metagenome Raw sequence reads. 3 records from Microbial diversity. 2 records from Intertidal Mixing Zone Targeted Locus (Loci). 2 records from XRU sediment metagenome Metagenome. 23 records from 16S rRNA Analysis of Osaka Bay Microbiomes. 20 records from coastal sediments Targeted Locus (Loci). 3 records from Anaerobic Photosynthetic Consortia 16s rRNA profiling. 1 records from Eukaryotic diversity in Central Park. 25 records from Patagonian fjord prokaryote community. 25 records from CECT Spanish Type Culture Collection(Bacteria). 4 records from Metagenome data from DNA stable isotope probing of Stiffkey saltmarsh sediment microcosms to investigate methanogenesis from choline. 3 records from Bacterial biogeography of a High Arctic ice cap. 19 records from Microbial diversity in four Mediterranean irciniid sponges. 303 records from Marine metagenomes from the bioGEOTRACES project. 20 records from Studies of marine microbial dark matter. 7 records from Bacteria in domestic water-storage containers with or without mosquito larvae. 4 records from marine sediment metagenome Raw sequence reads. 3 records from Qinghai Lake sediments Metagenome. 7 records from Microbiome profiling Schlöppnerbrunnen peat cores from different depths. 5 records from Distinctive community structure and high diversity in particle-associated prokaryotes in tropical and subtropical Pacific Ocean surface seawater. 3 records from Records of the Western Australian Microbial Culture Collection. 13 records from microbial community diversities of Tuosu Lake. 6 records from Santa Monica Basin seep sediment incubations to assess C and N sources for F430 synthesis. 1 records from Enriched mixed culture from mangrove sediment with capability of producing 1,3-PDO from glycerol genome sequencing and assembly. 667 records from Amplicon sequencing of Tara Oceans DNA samples corresponding to size fractions for protists.. 30 records from Microbial Biogeography and Potential Ecological Function Deep Indian Ocean Ridge. 1 records from Amino acid addition experiment Metagenome. 11 records from Comparison of marine sediments from the Beguela upwelling zone. 10 records from 16S Amplicon Data from an Antarctic Cold Seep. 75 records from Temporal sampling of marine metagenomes from Station ALOHA and BATS. 1 records from Amplicon sequencing of gyrA and parC in Escherichia communities in river/lake sediments. 6 records from Baltic Sea. 1 records from Comparative metagenome analysis of normal and arsenic contaminated soils from ballia district, Uttar Pradesh, India. 3 records from Marine sponges and seawater Targeted Locus (Loci). 12 records from Soil marker gene sequences across the Nutrient Network. 1 records from DOM nutrient stress experiment bacterial communities. 1 records from Metagenomic approach for studying picoeukaryotes in a extreme oligotrophic marginal sea (South Adriatic Sea) during winter mixed conditions. 10 records from environmental sample sequencing. 18 records from mangrove rhizosphere sediment Metagenome Raw sequence reads. 7 records from Agents pathogènes responsables de maladies traitées à l'Hôpital de Mènontin (Cotonou, Sud-Bénin). 1 records from sediment metagenome Raw sequence reads. 136 records from MGYS00005313. 1 records from Uncultured Environmental Isolate Targeted loci environmental. 32 records from Organisms responsible of infectious diseases listed at Menontin District Hospital (Cotonou, Atlantic department, South-Benin). 4 records from marine sediment Raw sequence reads. 1 records from 16S rRNA gene pyrosequencing and clone library revealed highly diverse microbial communities in natural marine biofilms. 18 records from Amplicon sequencing of Tara Oceans RNA samples corresponding to size fractions for protists.. 38 records from Bacterial diversity and community composition in grassland and forest soils of the German Biodiversity Exploratories. 10 records from 16S data describing Antarctic benthic sediment. 2 records from California Current Cruise CCE-P1408 Process Cruise #6. 11 records from surface sediment Raw sequence reads. 45 records from Diversity of bacterioneuston and bacterioplankton in coastal waters of Misaki, Japan. 2 records from Sediment saline lake Grevelingen (Netherlands) Raw sequence reads. 10 records from Surface sediment of Yellow Sea, Bohai Sea and north East China Sea Metagenome. 9 records from marine metagenome. 11 records from Response of soil bacteria to anthropogenic soil variables at large spatial scales. 6 records from ETNP Targeted Locus (Loci). 14 records from 15N methylamine SIP (WCO station L4). 2 records from Raw sequence reads. 9 records from Biogeography of pelagic bacterioplankton across an antagonistic temperature-salinity gradient in the Red Sea. 2 records from Pyrosequencing, the South Sea, May 2009. 3 records from Plant niche rather than soil or species shapes the microbiota. 80 records from estuary metagenome Raw sequence reads. 37 records from Dissolved compounds excreted by copepods reshape the diversity and the activity of marine bacterioplankton community. 1 records from Prokaryotic microbial communities structure in the headwater watchment of Dongjiang River in the south of China. 5 records from Eastern offshore environmental monitoring of Krishna Godavari Basin Bay of Bengal 2013-2016, Funded by: ONGC India. 24 records from 16S rDNA sequencing. 5 records from Global phylogeography survey of thermophilic spores in marine sediments.. 4 records from Prokaryotic community structure in the deep Southwest Indian Ocean with an emphasis on actinobacteria Targeted Locus (Loci). 60 records from Temporal dynamics of the particle-attached and free-living microbial communities from coastal seawater. 24 records from Microbial communities in marine surface water. 8 records from Bacterial ecology of sponges from Irish Waters. 7 records from Spatial Variation of Coastal Bacterioplankton Community along a Nitrogen and Phosphorus Co-pollution Gradient. 127 records from Phaeobacter inhibens host-attached and free-living communities. 1 records from Diet analysis of Pacific Bluefin Tuna larvae. 1 records from Fringing reef Metagenome. 59 records from Sea spray aerosols at Three California Beaches. 1 records from PCB-contaminated sediment Genome sequencing. 7 records from Southern Ocean microorganisms Targeted Locus (Loci). 6 records from Ocean Acidification baceria sample Targeted loci environmental. 23 records from Microbial Observatory of the Laboratoire Arago. 2 records from uncultured prokaryote Raw sequence reads. 1 records from Enriched_Iron_Ore_metagenome. 2 records from 16S rRNA genes Random survey. 14 records from Effect of genetics and environment on gut bacteria in Anopheles and Aedes mosquitoes.. 3 records from Natural History Museum (London) Collection Specimens. 15 records from microbes in coastal sea. 1 records from E1 Targeted Locus (Loci). 10 records from Caspian Sea Sediment - 16S Survey Targeted Locus (Loci). 619 records from anchialine metagenome Raw sequence reads. 2 records from Biomonitoring of marine vertebrates in Monterey Bay using eDNA metabarcoding. 1 records from Benthic microbial communities in the sediments of the Southern Ocean. 97 records from Short-term interaction of pyrene and cadmium in prokaryotic community in coastal sediment microcosms. 1660 records from Nahant Collection. 1 records from Biogeography of subsurface prokaryotic communities along with sediment deposition of sediments. 58 records from aquatic bacterial metagenome Raw sequence reads. 47 records from Marine (Aarhus) and freshwater (Lake Constance) sediment Raw sequence reads. 2 records from rDNA amplicon sequencing of Western North Atlantic microbial community. 19 records from Study on bacterial diversity and functionality in the Adriatic Sea. 33 records from Variations in prokaryotic community assembly and predicted metabolic potential of surface sediments with geography in the coastal northern Zhejiang, East China Sea. 12 records from Structure and function of picoplankton and virus communities along zonal gradients in the South Pacific Ocean. 6 records from Pyrosequencing reveals highly diverse and species-specific microbial communities in sponges from the Red Sea. 4 records from marine sediment metagenome Targeted loci environmental. 570 records from Coral-associated bacteria demonstrate phylosymbiosis and cophylogeny. 11 records from Uncultured Microbial Consortia in Industrialized Sites on Egypt''s Red Sea Coast Targeted loci environmental. 117 records from Effects of Fecal Input, Environmental Conditions, and Environmental Sources on Enterococci Concentrations in an Estuarine Ecosystem. 15 records from uncultured prokaryote Targeted loci environmental. 1 records from Deep mud-volcano biosphere in the Nankai accretionary wedge. 3 records from Antimony contaminated sediments Raw sequence reads. 45 records from Pelagic Microbiome: viruses to protists. 16S and 18S data from oceanic samples collected at the chlorophyll maximum.. 20 records from water Raw sequence reads. 2 records from estuary metagenome Raw sequence reads. 23 records from MiSeq 16S rRNA gene (prokaryotic 16S rRNA gene) sequences of 33 Mai Po sediments, including 18 samples from winter and 15 samples from summer. 1 records from Hydrothermal Deposit Targeted Locus (Loci). 4 records from A study on microbial functional groups producing a climate related gas in the ocean. 90 records from Copepod induced bacterial community Raw sequence reads. 4 records from Sundarbans estuarine ecosystem Metagenome. 1 records from Baltic Expression Project. 21 records from Bacterial community structure and their predicted functions in coastal sediments. 52 records from Microbial communities in the ocean Raw sequence reads. 30 records from Community structure of Archaea in the western North Pacific and the Arctic Ocean. 11 records from marine sediment metagenome Targeted loci environmental. 4 records from Sediment bacterial diversity. 424 records from BCCM/LMG Bacteria collection. 2 records from Bacteria of the genus Endozoicomonas dominate the microbial communities of the Mediterranean gorgonian soft coral Eunicella cavolini. 158 records from DSMZ Prokarya Collection Catalogue. 10 records from marine metagenome Metagenome. 4 records from Sea Education Association Sargasso Sea Cruise C247 May 2013. 1 records from Simulated crude oil seepage Caspian Sea Raw sequence reads. 35 records from marine plankton metagenome Raw sequence reads. 682 records from Coral. 107 records from 16S rDNA amplicon of Bacteria and Archaea Metagenome. 3 records from Sippewissett Salt Marsh tide pool sediment Targeted Locus (Loci). 2 records from Appliaction of metagenomic technique for isolation of microbes from mangroves for potential use in biofertilization and bioremediation. 117 records from Meta_Kosmos. 29 records from Coastal seawater influenced by the municipal effluents Raw sequence reads. 29 records from A long-standing complex tropical dipole shapes marine microbial biogeography. 8 records from Transplant and re-transplant microcosms of Baltic Proper and Bothnian Sea bacterioplankton Targeted Locus (Loci). 1 records from Archaea. 2 records from the under-explored coal gangue and the adjacent acid mine drainage creek soil Raw sequence reads. 46 records from marine sediment metagenome Metagenome. 8 records from Microbial diversity of marine sediments. 75 records from Biological rejuvenation of iron oxides in bioturbated marine sediments. 6 records from Pond sediments Metagenome. 1 records from Ascidian and Seawater Metagenome. 4 records from uncultured prokaryote Metagenome. 19 records from Arctic Ocean. 97 records from Microbial communities in estuarine sediments. 12 records from Bacteria in Anopheles darlingi breeding sites in Manaus, the Amazon, Brazil. 2 records from Effects of different types of wastewater on microbial degradation of 2,2'',4,4''-tetrabromodiphenyl ether (BDE-47) in anaerobic sediment.. 1413 records from MICROBIS database. 18 records from Colección de Bacterias del Museo de Historia Natural Marina de Colombia – Makuriwa (Invemar). 17 records from Green Edge microcosms Raw sequence reads. 2 records from Marine subseafloor sediment Targeted Locus (Loci). 1 records from Santa Barbara Channel cruise SBDOM11 bacterioplankton 16S rDNA. 70 records from Cascading influence of inorganic nitrogen sources on DOM production composition lability and microbial community structure in the open ocean. 6 records from Soil bacterial communities (Hainich National Park). 1 records from Arctic sea-ice and sub-ice seawater raw sequence reads. 1 records from Deep Subsurface Basalts Targeted Locus (Loci). 86 records from marine sediment metagenome Targeted loci environmental. 11 records from Methane and dissolved organic carbon fueled microbial loop supports a tropical subterranean estuary ecosystem. 33 records from Zooplankton microbiome of the Amazon River Plume and western trophic North Atlantic. 11711 records from Marine metagenomes Metagenome. 1 records from NEW-1. 2 records from Deep Sea Sponge and Seawater Targeted Locus (Loci). 4 records from Pelagic sediment metagenome of Gulf of Kutch. 3 records from Diversity of archaeal and bacterial 16S rRNA gene in marine sediment in Aarhus Bay. 93 records from Red Sea microbial plankton Raw sequence reads. 8 records from Hydrate Ridge, OR - Deep sea cold seep ecosystem Targeted Locus (Loci). 35 records from California Current System Long Term Ecological Research P1604 (CCS_LTER_P1604) Targeted loci environmental. 39 records from Limited influence of primary treated sewage waters on bacterial abundance, production and community composition in coastal seawaters. 170 records from Bacterial Diversity in the East China Sea. 2 records from marine sediment metagenome Raw sequence reads. 75 records from Impact of a major inflow event on the composition and distribution of bacterioplankton communities in the Baltic Sea. 2 records from Bacterial community of cold seeps Metagenome. 8 records from marine metagenome Targeted loci environmental. 1 records from Microbial Diversity in the Southwest Atlantic Ocean and Patagonian Freshwater Bodies. 6 records from European Molecular Biology Laboratory Australian Mirror. 128 records from Bacteria exposure experiment North Sea. 53 records from Microbial Processes and Biodiversity: OCEAN. 5 records from Diversity and composition of sediment microbial assemblages in an Atlantic port environment. 29 records from Ecological succession leads to chemosynthesis in mats colonizing wood in sea water. 1 records from solar evaporation pond sample Metagenome. 2 records from Algae - Domestic Bacteria (KIDR-AG). 19 records from the assembly of abundant and rare bacterioplankton subcommunities in three subtropical bays. 10 records from BSM marine Targeted Locus. 2 records from Extracellular DNA marine sediment Targeted Locus (Loci). 11 records from Microbiome variation in Agaricia undata with distinct depth distribution ranges. 58 records from IMPACT OF SAHARAN DUST DEPOSITION ON BACTERIOPLANKTON IN MARINE SURFACE WATER. 63 records from Marine Bacteria 16S V4 Raw sequence reads. 7 records from marine metagenome Targeted Locus (Loci). 24 records from microbial community composition of marine water and sediment. 217 records from Development and validation of a multi-trophic metabarcoding biotic index for benthic organic enrichment biomonitoring using a salmon farm case-study.. 10 records from Nitrate-storing microorganisms in sediments of the Bornholm Basin. 3 records from Pelagic sediment metagenome of Gulf of Khambhat. 3 records from Marine sediment Raw sequence reads. 30 records from 16S_Sediment_Bolinao. 52 records from Biological Resource Center, Department of Biotechnology, National Institute of Technology and Evaluation. 11 records from Diversity of SE Pacific benthic Bacteria and Archaea communities Targeted Locus (Loci). 102 records from SCHEMA_Sediment. 3 records from Marine metagenome ICM_GPS. 23 records from Distribution of the Roseobacter clade. 15 records from SB Marine Metagenome. 104 records from Sediment Metagenome Raw sequence reads. 2 records from Microbial diversity studies of Arabian Sea sediment. 18 records from Dark ocean microbial diversity. 4 records from Microbial community of Red Sea (16S amplicon) Targeted Locus (Loci). 1 records from Metagenomic investigation of six depths from the anchialine Bundera sinkhole. 5 records from Metagenetic analysis of copepod community in the tropical and subtropical Pacific. 1 records from Bacterial 16S rRNA and fungal ITS Metagenome. 6 records from Peruvian eddy shotgun metagenomes. 12 records from Sediment bacteria in the Southern Ocean. 3 records from marine methane seep Targeted Locus (Loci). 2 records from Niche partitioning of methanotrophs in stratified lakes. 2 records from Spatial and environmental variation in whole microbial communities in Fildes Bay, King George Island, Antarctica Raw sequence reads. Data from some individual datasets included in this download may be licensed under less restrictive terms. |
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