Occurrence Download
A dataset containing 130482 species occurrences available in GBIF matching the query: { "TaxonKey" : [ "is Acidobacteriales" ] } The dataset includes 130482 records from 590 constituent datasets: 1 records from Antarctic Lakes Brine Raw sequence reads. 93 records from Comparative...
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| Format: | Dataset |
| Language: | unknown |
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The Global Biodiversity Information Facility
2020
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| Online Access: | https://dx.doi.org/10.15468/dl.55pzgt https://www.gbif.org/occurrence/download/0132873-200613084148143 |
| Summary: | A dataset containing 130482 species occurrences available in GBIF matching the query: { "TaxonKey" : [ "is Acidobacteriales" ] } The dataset includes 130482 records from 590 constituent datasets: 1 records from Antarctic Lakes Brine Raw sequence reads. 93 records from Comparative 16S analysis of hydrothermal vent samples from the Mid-Atlantic Ridge (MAR). 4 records from Mesocosm Targeted Locus (Loci). 25 records from Baselines Initiative 16S rRNA gene dataset: Baselines Amplicon Release 1 (R1) Indian Ocean 2015. 2 records from Geotraces Raw sequence reads. 2 records from Whale fall. 5 records from Northern Gulf of Mexico Hypoxic Zone Raw sequence reads. 2 records from Sinking bloom influences benthic microorganisms. 1 records from Prince Edward Island marine metgenome Raw sequence reads. 5 records from Microbial communities of methane seeps in shallow, porous sands off Elba. 171 records from Seasonal and spatial diversity of bacterial communities in marine sediments of Ningbo Xiangshan Coastal Ocean. 72 records from Polymetallic nodule field Targeted loci environmental. 13 records from microbial communities in long-term e-waste contaminated river sediments. 19 records from XRCWU sediment metagenome Metagenome. 99 records from Po river Prodelta and Mar Piccolo of Taranto surface sediments bacterial communities targeted loci. 91 records from eDNA_Subseafloor. 34 records from Abyssal Baseline Study & Geophysical Survey (ABYSSLINE 02)_AB01_Re-sequenced Targeted loci environmental. 23 records from Impact of Plant Development on Structure and Function of Rhizosphere Microbial Community associated with Groundnut (Arachis hypogaea L.). 2 records from marine sediment metagenome Metagenome. 7 records from Marine methane seep Targeted Locus (Loci). 33 records from Incubation of marine methane seep sediments with a bioorthogonal amino acid. 60 records from PREsediment Targeted Locus (Loci). 42 records from Microbial ecology of archaeal community in sediment from adjacent waters of Rushan Bay. 2167 records from Microbial community structure is affected by cropping sequences and bio-covers under long-term no-tillage. 19 records from Vertical profiles of bacterial community diversity in a drinking water reservoir. 27 records from Compost microbe establishment and growth in agricultural soils. 8 records from Molecular Characterization of the Structural and Functional Microbial Community in Sediments of a Northern Utah, Basin-Fill Aquifer. 146 records from Microbial community in PAH-contaminated riverine sediments. 2 records from Analysis of plasmidome of high-altitude lakes from the Andean Puna. 1 records from Estudio de la microflora de los suelos de la zona de preservación ecológica 'La Uva' (Sinaloa) con vegetación de selva baja caducifolia empleando taxonomía molecular. 13 records from Transitional subsurface-to-surface microbial diversity in a terrestrial serpentinizing seep (Manleluag, Pangasinan, the Philippines). 3535 records from Effects of organic matter manipulation on archaeal, bacterial, and fungal community assembly. 12 records from coastal sediment diversity study. 16 records from Bacteria community in the southern East China Sea. 37 records from marine sediment metagenome Raw sequence reads. 107 records from Soil metagenome from healthy and unhealthy agricultural soil. 123 records from Fe3+ and Mn4+ - induced changes in microbial communities of boreal lake sediments. 1 records from Baltic Sea Basin sediments diversity Raw sequence reads. 1 records from Novel Biphenyl Oxidizing Bacteria and Dioxygenase Genes from a Korean Tidal Mudflat. 90 records from Fluctuating redox regimes raw sequence reads. 150 records from Coastal Sediment Bacterial Community Alterations in Association with Sudden Vegetation Dieback. 4 records from Uranium reducing microbial consortia, under alkaline conditions relevent to geological disposal. 5 records from Marine Metagenome. 219 records from Study of microbial diversity from sediment samples of the SaiGon-DongNai system. 5 records from DSMZ Bacteria. 1 records from Oxic sediment - Extracellular Metagenome. 4 records from Aquifer sediment nitrate reducing community change. 1 records from Microbial communities in deep eastern Mediterranean Sea surface sediments. 273 records from Bacterial 16S rRNA gene sequencing of Antarctic soil. 3 records from Atlantic salmon microbiota. 7 records from 16s data marine community of L4 station. 817 records from It was verified the impact of irrigation treatments (wet, optimal, dry and very dry) and three potato cultivars on soil microbial community.. 1 records from IFO Bacteria database. 18 records from The Indigo Project: a global citizen science Ocean survey. 5 records from 16S rRNA metagenomic investigation of arsenotrophic bacteriome of ground water and soil from arsenic-prone area of Bangladesh. 27 records from Microbial community structure and dynamics in the oxygen minimum zone of the Northeast subarctic Pacific Ocean. 1 records from Bacteria Collection in BCRC. 1 records from Mid-Atlantic Ridge sediment Raw sequence reads. 613 records from Temporal variation in pesticide biodegradation. 38 records from Sediment river Genome sequencing and assembly. 3 records from Seawater Targeted Locus (Loci). 14 records from nirS-Encoding and nirK-Encoding Denitrifiers in the Sediment of Daya Bay Raw sequence reads. 120 records from North Pacific Subtropical Gyre Microbial Community. 1 records from Development and validation of a marine experimental life support system for accessing synergistic effects of climate change and oil pollution on microbial communities. 102 records from Herbicide-incubated GBR lagoon microbiomes Targeted loci environmental. 833 records from Macroalgal Morphology affects composition and settlement of microbial communities. 31 records from Salt Marsh Sediments Raw sequence reads. 12 records from Arctic microbiome along Svalbard Cross Shelf transects. 92 records from Assessing the effects of salmon farming seabed enrichment using bacterial community diversity and high throughput sequencing. 2 records from Marine Water Column Samples Targeted loci environmental. 8670 records from Bacerial and archaeal diversity in Central Park. 30 records from Microbial diversity in the Tongyeong-Geoje coastal area of Korea. 18 records from Bacterial communities from the water column and the surface sediments along a transect in the East Sea (Sea of Japan). 20 records from Marine metagenome Targeted loci environmental. 5 records from Prokaryotic community response to microalgal lysates. 36 records from Controls on microalgal community structures in cryoconite holes upon high Arctic glaciers, Svalbard. 137 records from CEFS_16S_ITS. 6 records from Svalbard Targeted Locus (Loci). 5 records from Organic matter from melting Arctic sea ice triggers bacterioplankton activity and diversity. 34 records from Effect of size fractionation and DNA extraction on the diversity and composition of prokaryotic and eukaryotic plankton community. 43 records from Enhanced pyrene and benzo[a]pyrene degradation by plant root and SMFC. 18 records from XRCWD sediment metagenome Metagenome. 12 records from Diet analysis of Japanese sardine and Pacific round herring larvae. 15 records from sediment metagenome Metagenome. 1 records from Lonar sediment Raw sequence reads. 2 records from Species-specific associations between bacterioplankton and photosynthetic picoeukaryotes. 36 records from BACTERIAL COMMUNITIES IN THE ACID AND THERMOPHILIC CRATER-LAKE OF THE VOLCANO "EL CHICHON", MEXICO. 4 records from Spirulina necromass degradartion in arctic marine sediments. 30 records from Oceanic microplankton do not adhere to the latitudinal diversity gradient. 15 records from Microbial community in marine sediments. 12 records from Targeted loci sequencing of anaerobic benzene-degrading enrichment cultures. 1 records from Japan Collection of Microorganisms(Bacteria). 48 records from magnetite Targeted Locus (Loci). 173 records from Biogeography of coastal wetland bacterial communities experiencing sudden vegetation dieoff. 25 records from Marine photic zone, New Caledonia Lagoon raw sequence reads, nitrogenase amplicons. 3 records from Equatorial Pacific Ocean Targeted loci environmental. 23 records from Antarctic Snow Algae 2014/15 16S and 18S Illumina Seq of snow algae communities around Ryder Bay, Antarctica. 1 records from Localized impact of aquaculture effluent on Red Sea coral reef water nutrients and microorganisms. 4 records from Microbial diversity of Oslo Fjord Pockmark sediments. 426 records from EMOSE (2017) Inter-Comparison of Marine Plankton Metagenome Analysis Methods. 27 records from uncultured prokaryote Targeted loci environmental. 13 records from Bermuda Atlantic Time-series Study metagenomes. 29 records from Marine bacteria metagenome. 75 records from Microbial diversity in the Tongyeong-Geoje coastal area of Korea2. 1 records from Shallow-water pockmarks diversity Targeted Locus (Loci). 9 records from Submarine Ligurian Canyons Water Prokaryotic and Protist Communities. 3 records from 16S rRNA amplicon from marine Bacteria Raw sequence reads. 4 records from marine sediment metagenome Raw sequence reads. 459 records from Diversity of microbial community (bacteria, micro-eukaryotes and fungi) in the Passage of Lascaux Cave.. 9 records from Hydrate Ridge, OR - Deep sea cold seep ecosystem Targeted Locus (Loci). 98 records from Microbial processes in iron-rich sediments of Lake Towuti, Indonesia: Disentangling the methane and iron cycles. 61 records from Comparison of copper contaminated soils, with similar uncontaminated controls.. 184 records from 16S amplicons Subtropical Frontal Zone New Zealand. 15 records from Gulf of Mexico open ocean Targeted Locus (Loci). 47 records from Taxonomic study of endospores in a marine sediment. 2 records from Sea water microorganisms Raw sequence reads. 1 records from seawater metagenome Raw sequence reads. 2 records from Distribution and composition of thiotrophic mats in the hypoxic zone of the Black Sea (150-170m water depth, Crimea margin). 1 records from ocean bacteria Metagenomic assembly. 8 records from Eukaryotic natural population from Northern Baffin Bay - Raw sequence reads. 2 records from Nutrient addition mesocosm experiment Targeted Locus (Loci). 146 records from Marine methane seep Targeted Locus (Loci). 15 records from Spatial variation of bacterioplankton in south Atlantic Bight. 52 records from Microbial communities associated with Juncus roemerianus and Spartina alterniflora vegetated sediments in Louisiana saltmarshes. 22 records from Microbial community structure or iron oxyhydroxides rich mound in Satsuma Iwo-jima, Japan. 4 records from Characteristics of bacterial communities in the deep sediment Lake Baikal from the regions with oil and gases discharging. 3 records from Old Rifle sediment Raw sequence reads. 155 records from Tyne oil spill snorkels Raw sequence reads. 471 records from Zostera Marina Ammonification environmental. 4662 records from Organic agricultural field soil Raw sequence reads. 594 records from Geographically tagged INSDC sequences. 56 records from Bacterial 16s Amplicon Sequencing of the Atlantic Ocean. 20 records from Temporal dynamics of bacterioplankton community in response to excessive nitrate loading in the oligotrophic coastal water. 1 records from Bacteria Metagenome. 38 records from marine sediment metagenome Raw sequence reads. 2 records from Baselines Initiative 16S rRNA gene dataset: Baselines Amplicon Release 1 (R1) North Pacific Line-67 2009. 4 records from Gulf Oil Spill underwater oil plume samples Targeted Locus (Loci). 1 records from 2011 depth sediment Metagenome. 376 records from Abundance, diversity and distribution of Legionellales in wet environments in Sweden. 2 records from SOLA Raw sequence reads. 3 records from A comparison of microbial community composition in four contrasting sediments in the Celtic Sea. 3 records from May 2013 DNA-SIP marine seawater bacteria metagenomic assembly. 5 records from Exploring Fronts With Multiple Robots Schmidt Ocean Institute Cruise to the Pacific Ocean in 2018. 18 records from North Sea plastic incubation and reference communities, raw sequence reads. 85 records from Cryoconite sediments Targeted Locus (Loci). 1 records from Global Ocean Sampling Expedition. 15 records from Baselines Initiative 16S rRNA gene dataset: Baselines Amplicon Release 1 (R1) Caribbean Sea near Curacao (including saline pond samples in Curacao) 2015. 2 records from Evidence of bacterioplankton community adaption in responses to long-term mariculture disturbance. 5 records from Bacterial communities in sandy sediment at submarine volcanic vents off Panarea Island (Italy). 47 records from particle-attached and free-living bacteria kongsfjorden. 4 records from Guaymas Basin and Sonora Margin sediment Targeted loci. 1 records from Microbial community structures of chimney in DODO and Solitaire hydrothermal fields. 40 records from Saltern of Margherita di Savoia Metagenome. 20 records from Shotgun Metagenome Sequencing of Lake Soyang. 6 records from South China Normal University mangrove sediment Targeted Locus (Loci). 136 records from DEEPEND: Microbiome and bacterioplankton rRNA gene sequence data collected from Gulf of Mexico seawater samples. Cruises DP03 and DP04 from Jan 2016 - December 2016. 249 records from US East Coast Salt Marshes Targeted Locus (Loci). 2 records from Narragansett Bay, RI Sediments Targeted Locus (Loci). 3526 records from Who eats the tough stuff DNA stable isotope probing (SIP) of bacteria and fungi degrading 13C-labelled lignin and cellulose in forest soils. 1 records from sediment microorganism Metagenome. 117 records from Zooplankton communities in the coastal water of northeastern Hokkaido. 23 records from permafrost metagenome Targeted loci environmental. 1 records from Mud volcano Metagenome. 4 records from marine sediment metagenome Metagenome. 10 records from CTD water column metabarcoding. 2 records from Abalone seed nursing ecosystem Metagenome. 73 records from Lakes ediments of the Amazon River system Raw sequence reads. 102 records from marine sediment metagenome Raw sequence reads. 41 records from Microbial populations of Lascaux's Apse in relation to collembola and black stains on cave walls.. 6 records from Microbial diversity. 11 records from Intertidal Mixing Zone Targeted Locus (Loci). 22 records from XRU sediment metagenome Metagenome. 4 records from Metagenomic sequence from soil bacteria. 6 records from Long distance electron transfer by cable bacteria in aquifer sediments. 8 records from 16S rRNA Analysis of Osaka Bay Microbiomes. 5 records from coastal sediments Targeted Locus (Loci). 10 records from BES pyrosequencing. 1 records from Anaerobic Photosynthetic Consortia 16s rRNA profiling. 5847 records from Eukaryotic diversity in Central Park. 97 records from Patagonian fjord prokaryote community. 3 records from Metagenome data from DNA stable isotope probing of Stiffkey saltmarsh sediment microcosms to investigate methanogenesis from choline. 286 records from Bacterial biogeography of a High Arctic ice cap. 4 records from Microbial diversity in four Mediterranean irciniid sponges. 1 records from Anammox bacteria in sediment cores of Daya Bay, China. 2 records from dsrB gene diversity in marine coastal sediments in Aarhus Bay, Denmark. 119 records from Marine metagenomes from the bioGEOTRACES project. 5 records from Studies of marine microbial dark matter. 27 records from Bacteria in domestic water-storage containers with or without mosquito larvae. 1 records from marine sediment metagenome Raw sequence reads. 29 records from Qinghai Lake sediments Metagenome. 347 records from Microbiome profiling Schlöppnerbrunnen peat cores from different depths. 3 records from dsrB sequencing of sulfate-reducing microbial communities in Skagerrak and Baltic sediment. 8 records from microbial community diversities of Tuosu Lake. 49 records from Santa Monica Basin seep sediment incubations to assess C and N sources for F430 synthesis. 192 records from Amplicon sequencing of Tara Oceans DNA samples corresponding to size fractions for protists.. 170 records from Microbial Biogeography and Potential Ecological Function Deep Indian Ocean Ridge. 227 records from Amino acid addition experiment Metagenome. 69 records from 16S Amplicon Data from an Antarctic Cold Seep. 22 records from Comparison of marine sediments from the Beguela upwelling zone. 51 records from Temporal sampling of marine metagenomes from Station ALOHA and BATS. 31 records from Baltic Sea. 22 records from Amplicon sequencing of gyrA and parC in Escherichia communities in river/lake sediments. 12 records from Comparative metagenome analysis of normal and arsenic contaminated soils from ballia district, Uttar Pradesh, India. 1549 records from Soil marker gene sequences across the Nutrient Network. 241 records from soil metagenome Raw sequence reads. 31 records from environmental sample sequencing. 33 records from mangrove rhizosphere sediment Metagenome Raw sequence reads. 1 records from Microbial diversity in shallow water hydrothermal sediments of Gueishan Island, Taiwan. 13 records from sediment metagenome Raw sequence reads. 2859 records from MGYS00005313. 36 records from Uncultured Environmental Isolate Targeted loci environmental. 1 records from Bayside Harbour, NS, Canada (plankton SSU library 454 sequencing). 3 records from marine sediment Raw sequence reads. 1 records from 16S rRNA gene pyrosequencing and clone library revealed highly diverse microbial communities in natural marine biofilms. 7 records from Amplicon sequencing of Tara Oceans RNA samples corresponding to size fractions for protists.. 7434 records from Bacterial diversity and community composition in grassland and forest soils of the German Biodiversity Exploratories. 16 records from Life in a toxic environment. 14 records from Genetic potential for pentachlorophenol degradation at historically contaminated groundwater sites. 7 records from Polyamine-transforming bacterioplankton in seawater. 10 records from Microbial community structure of chronically polluted marine sediments from a cold region of the southern hemisphere. 373 records from Marine Bacteria 16S V4 Raw sequence reads. 1 records from marine metagenome Targeted Locus (Loci). 16 records from Metagenomics of Jacarepagua Lagoon. 2 records from Aarhus Bay sediment PCR amplified product sequencing. 4 records from Standard filtration practices significantly distort planktonic microbial diversity estimates. 1 records from Arctic benthos Targeted Locus (Loci). 28 records from 3Soil16S. 12 records from Marine sediment Raw sequence reads. 87 records from Bacterial diversity in snow from mid-latitude mountain areas: Alps, Eastern Anatolia, Karakoram and Himalaya.. 2725 records from Bacterias y Arqueas de la transición Andino-Amazónica del departamento del Caquetá - Proyecto Colombia BIO. 30 records from seawater metagenome Genome sequencing and assembly. 169 records from Mariana and Kermadec Trench sediment 16S rRNA gene sequencing. 119 records from Methanogens and iron-reducing bacteria are major contributors to mercury methylation in boreal lake sediments. 5 records from seawater bacterial community Raw sequence reads. 153 records from PAH-contaminated sediment from the Lagos Lagoon, Nigeria. 7 records from ADDOMEx. 17 records from Sediment bacterial 16S in Hachiro polder.. 6 records from Coral or reef-seawater associated bacteria Targeted Locus (Loci). 1 records from UCYN-A diversity in the Pacific. 6 records from Eukaryote diversity assessment of sediments of the Western English Channel. 1 records from marine metagenome Raw sequence reads. 19 records from Mediterranean Contaminated Pelagic communities. 13 records from ADDOMEx Tier 3 Experiments: Mesocosm Si with Gulf of Mexico coastal waters. 1 records from Hypersaline sapropels Targeted loci environmental. 250 records from MeHg Coal Ash. 1214 records from Non-target effects of Metarhizium brunneum on soil microbial communities. 137 records from Marine Sediment from the Berkeley Bay Targeted Locus (Loci). 93 records from Chandeleur Island 2016 Amplicon Study Raw sequence reads. 1652 records from Microbial biogeography of 925 geothermal springs in New Zealand. 268 records from Time course change of microbial community in tsunami sediment caused by the Great East Japan Earthquake. 11 records from Shotgun Metagenomic Sequencing of the Arctic Ocean during Winter-Spring Transition. 7 records from Pelagic Gulf of Mexico Targeted loci environmental. 8 records from VAG Mine Pit Pond Metagenome. 29 records from PCE/TCE dechlorinating microbial community and dehalogenase genes from Wonju Stream, South Korea. 6 records from The effect of salinity in prokaryotic communities in an estuary. 1 records from Socompa Lake Stromatolite Shotgun Metagenomic Sequencing. 1 records from sediment microorganisms nirK gene Raw sequence reads. 1 records from Metagenomic investigation of the coastal region of south Gujarat using soil sample - Nargol, Umargam and Dandi. 9 records from Assessing the microbial diversity in Cape Comorin ocean water. 85 records from 16S data describing Antarctic benthic sediment. 22 records from surface sediment Raw sequence reads. 29 records from Diversity of bacterioneuston and bacterioplankton in coastal waters of Misaki, Japan. 19 records from rRNA, rDNA bacteria thaw ponds Targeted loci environmental. 8 records from marine metagenome. 46 records from Surface sediment of Yellow Sea, Bohai Sea and north East China Sea Metagenome. 4585 records from Response of soil bacteria to anthropogenic soil variables at large spatial scales. 11 records from ETNP Targeted Locus (Loci). 6 records from Blue Mountains Swamp Archaea. 9 records from Raw sequence reads. 6 records from Pyrosequencing, the South Sea, May 2009. 948 records from Plant niche rather than soil or species shapes the microbiota. 493 records from estuary metagenome Raw sequence reads. 316 records from Prokaryotic microbial communities structure in the headwater watchment of Dongjiang River in the south of China. 2 records from Vertical stratification of microbial communities in the Red Sea revealed by 16S rDNA pyrosequencing. 185 records from 16S sequencing of environmental samples to test the impact of sediment source. 37 records from Taxonomic composition of microbial communities in coastal Arctic sediments. 7 records from marine sediment metagenome Metagenomic assembly. 14 records from Metagenome from mudbank Area,Alappuzha Kerala India. 35 records from Groundwater microbiome. 1 records from Structuring effect of environmental variables on protistan diversity patterns in two anoxic marine basins. 367 records from Reciprocal transplantation experiment of salt marsh sediments Targeted loci. 14 records from MiSeq 16S rRNA gene (prokaryotic 16S rRNA gene) sequences of 16 SCS sediments. 209 records from Composition and Genetic Diversity of Microbial Communities in Subtropical Coastal Wetland Sediments. 4 records from CCA_pathobiome. 18 records from Little Sippewissett Marsh Targeted Locus (Loci). 71 records from Microbial populations of Lascaux's Apse in relation to collembola and black stains on cave walls.. 49 records from Sewer sediments Targeted loci environmental. 18 records from sediment metagenome Metagenome. 21 records from Aldegondabreen cryoconite Targeted Locus. 31 records from water sample Raw sequence reads. 2 records from Ocean sediment-basement interface Targeted Locus (Loci). 2 records from Comparative analysis of bacterial community-metagenomics in coastal Gulf of Mexico sediment microcosms following exposure to Macondo oil (MC252). 10 records from marine sediment metagenome Raw sequence reads. 23 records from Soil DNA extracted from Robinson Ridge, East Antarctica Raw sequence reads. 236 records from Bacterial Biomarkers of Marcellus Shale Activity in Pennsylvania. 27 records from Benham Rise 16S raw sequence reads. 2 records from Oil-water intephase microbial community analysis Raw sequence reads. 6524 records from 16S amplicons New Zealand agricultural soils. 379 records from sediment metagenome Raw sequence reads. 6 records from Impacts of crude oil and chemical dispersant exposure on marine microbial biofilm formation and steel corrosion. 20 records from XRM sediment metagenome Metagenome. 135 records from Microbial diversity in the Benguela coastal upwelling system as derived from 16S rRNA sequencing and RNA Stable Isotope Probing (SIP). 4 records from Minor impact of ocean acidification to the structure of an Arctic sediment microbial community. 165 records from A practical introduction to microbial molecular ecology through the use of iChips. 14 records from 16S rDNA metagenomes of Western Balkans glacial lakes sediments. 9 records from Bacterial communitiy compositions on natural and artificial substrates in the Spermonde Archipelago, Indonesia. 16 records from Sediment metagenome. 1532 records from Microbial communities associated with Eurasian watermilfoil, water and sediment. 1 records from Metagenomics of Brava and Tebenquiche lakes microbial mats. 13 records from Future climate change affects the microbiome and condition of habitat-forming kelp. 17 records from Eastern offshore environmental monitoring of Krishna Godavari Basin Bay of Bengal 2013-2016, Funded by: ONGC India. 108 records from 16S rDNA sequencing. 13 records from Global phylogeography survey of thermophilic spores in marine sediments.. 22 records from Cataloging the Microbial Diversity of Sundarbans in the Backdrop of Climate Change. 13 records from Prokaryotic community structure in the deep Southwest Indian Ocean with an emphasis on actinobacteria Targeted Locus (Loci). 27 records from Temporal dynamics of the particle-attached and free-living microbial communities from coastal seawater. 8 records from Microbial communities in marine surface water. 2 records from Spatial Variation of Coastal Bacterioplankton Community along a Nitrogen and Phosphorus Co-pollution Gradient. 6 records from Diet analysis of Pacific Bluefin Tuna larvae. 96 records from Phaeobacter inhibens host-attached and free-living communities. 76 records from Sea spray aerosols at Three California Beaches. 9 records from Southern Ocean microorganisms Targeted Locus (Loci). 59 records from PCB-contaminated sediment Genome sequencing. 1 records from Southern Ocean. 33 records from 16S rRNA genes Random survey. 9 records from Effect of genetics and environment on gut bacteria in Anopheles and Aedes mosquitoes.. 12 records from Archaea 16S 01-13 Genome sequencing and assembly. 6 records from microbes in coastal sea. 4 records from E1 Targeted Locus (Loci). 243 records from Microbial biogeography of French caves. 48 records from Caspian Sea Sediment - 16S Survey Targeted Locus (Loci). 1 records from Biomonitoring of marine vertebrates in Monterey Bay using eDNA metabarcoding. 89 records from Short-term interaction of pyrene and cadmium in prokaryotic community in coastal sediment microcosms. 457 records from anchialine metagenome Raw sequence reads. 8 records from Benthic microbial communities in the sediments of the Southern Ocean. 111 records from Bacterial community profiles in a bioreduced uranium contaminated site after reoxidation. 676 records from Nahant Collection. 20 records from aquatic bacterial metagenome Raw sequence reads. 1 records from Biogeography of subsurface prokaryotic communities along with sediment deposition of sediments. 116 records from Marine (Aarhus) and freshwater (Lake Constance) sediment Raw sequence reads. 5 records from Sediment sample Metagenome. 2 records from rDNA amplicon sequencing of Western North Atlantic microbial community. 86 records from Variations in prokaryotic community assembly and predicted metabolic potential of surface sediments with geography in the coastal northern Zhejiang, East China Sea. 1 records from Study on bacterial diversity and functionality in the Adriatic Sea. 1 records from Pyrosequencing reveals highly diverse and species-specific microbial communities in sponges from the Red Sea. 2 records from marine sediment metagenome Targeted loci environmental. 73 records from Coral-associated bacteria demonstrate phylosymbiosis and cophylogeny. 31 records from Eastern Mediterranean Sea Lignin and Xylan enrichments. 298 records from Ice Wedge Polygon. 120 records from Drinking water distribution system biofilm samples Metagenome. 345 records from Effects of Fecal Input, Environmental Conditions, and Environmental Sources on Enterococci Concentrations in an Estuarine Ecosystem. 1836 records from uncultured prokaryote Targeted loci environmental. 4 records from Deep mud-volcano biosphere in the Nankai accretionary wedge. 57 records from Antimony contaminated sediments Raw sequence reads. 1 records from water Raw sequence reads. 10 records from Pelagic Microbiome: viruses to protists. 16S and 18S data from oceanic samples collected at the chlorophyll maximum.. 21 records from ZRU sediment metagenome Metagenome. 79 records from estuary metagenome Raw sequence reads. 98 records from MiSeq 16S rRNA gene (prokaryotic 16S rRNA gene) sequences of 33 Mai Po sediments, including 18 samples from winter and 15 samples from summer. 1 records from There are 3 zooplankton samples from 3 different ponds, we collected sample and use the fresh samples to do DNA extraction directly, then mix them with adjustment guided by the number of species within each of them. At last, use Hiseq-2599 PE-150 to do NGS work. 1 records from Sundarbans estuarine ecosystem Metagenome. 7 records from Copepod induced bacterial community Raw sequence reads. 8 records from Baltic Expression Project. 93 records from Bacterial community structure and their predicted functions in coastal sediments. 68 records from Microbial communities in the ocean Raw sequence reads. 68 records from Artificial stream sediment raw sequence reads. 4 records from Community structure of Archaea in the western North Pacific and the Arctic Ocean. 12 records from Bacterial and fungal diversity in Ashumet Pond, MA (USA), and prevalence of manganese-oxidizing isolates. 17 records from marine sediment metagenome Targeted loci environmental. 117 records from Microbial diversity in benthic stream sediment. 1 records from Antarctic Hypersaline Brine Raw sequence reads. 8 records from Uncultered bacterium Targeted Locus (Loci). 3 records from KB34 Transcriptome or Gene expression. 6 records from BCCM/LMG Bacteria collection. 35 records from DSMZ Prokarya Collection Catalogue. 87 records from marine metagenome Metagenome. 2 records from Simulated crude oil seepage Caspian Sea Raw sequence reads. 491 records from Coral. 4 records from marine plankton metagenome Raw sequence reads. 22 records from 16S rDNA amplicon of Bacteria and Archaea Metagenome. 1426 records from Soil Microbial communities from weed germination bioassay targeted loci environmental. 3 records from Sippewissett Salt Marsh tide pool sediment Targeted Locus (Loci). 4 records from Appliaction of metagenomic technique for isolation of microbes from mangroves for potential use in biofertilization and bioremediation. 5 records from Coastal seawater influenced by the municipal effluents Raw sequence reads. 2 records from Meta_Kosmos. 1 records from Marine metagenome ICM_WBS. 6 records from A long-standing complex tropical dipole shapes marine microbial biogeography. 49 records from Shotgun metagenomic analysis of Lake Paajarvi sediment microbes.. 19 records from Surface Diatom Sediments of Deep Freshwater Lake Baikal. 22 records from Archaea. 483 records from the under-explored coal gangue and the adjacent acid mine drainage creek soil Raw sequence reads. 133 records from marine sediment metagenome Metagenome. 118 records from Biological rejuvenation of iron oxides in bioturbated marine sediments. 30 records from Microbial diversity of marine sediments. 29 records from Pond sediments Metagenome. 2 records from Ascidian and Seawater Metagenome. 8 records from Distributions and Abundances of Sublineages of the N2-Fixing Cyanobacterium Candidatus Atelocyanobacterium thalassa (UCYN-A) in the Noumea Lagoon. 15 records from Arctic Ocean. 10 records from Bacteria in Anopheles darlingi breeding sites in Manaus, the Amazon, Brazil. 42 records from Microbial communities in estuarine sediments. 67 records from Effects of different types of wastewater on microbial degradation of 2,2'',4,4''-tetrabromodiphenyl ether (BDE-47) in anaerobic sediment.. 18643 records from MICROBIS database. 2 records from Metagenome microbial communities of bottom sediments of the Kara Sea. 6 records from bacterial community in the deep-sea surface sediments. 2 records from Green Edge microcosms Raw sequence reads. 3 records from Marine subseafloor sediment Targeted Locus (Loci). 5 records from Cascading influence of inorganic nitrogen sources on DOM production composition lability and microbial community structure in the open ocean. 7610 records from Soil bacterial communities (Hainich National Park). 1031 records from Soil microbial response to organic disturbances. 1 records from Arctic sea-ice and sub-ice seawater raw sequence reads. 2 records from Deep Subsurface Basalts Targeted Locus (Loci). 12 records from Bacterial community of river sediment enriched with polycyclic aromatic hydrocarbons. 173 records from marine sediment metagenome Targeted loci environmental. 20 records from Methane and dissolved organic carbon fueled microbial loop supports a tropical subterranean estuary ecosystem. 26 records from Enrichment of organohalide respiring bacteria. 2737 records from Marine metagenomes Metagenome. 10 records from Zooplankton microbiome of the Amazon River Plume and western trophic North Atlantic. 1 records from Archaea microbial communities structure in the sediment and downarea soil of the Fengshuba Reservoir in the Guangdong Provinve, South China. 2 records from NEW-1. 6 records from Deep Sea Sponge and Seawater Targeted Locus (Loci). 15 records from Pelagic sediment metagenome of Gulf of Kutch. 15 records from Red Sea microbial plankton Raw sequence reads. 19 records from Diversity of archaeal and bacterial 16S rRNA gene in marine sediment in Aarhus Bay. 45 records from microbial community composition of marine water and sediment. 171 records from Development and validation of a multi-trophic metabarcoding biotic index for benthic organic enrichment biomonitoring using a salmon farm case-study.. 6 records from sediment metagenome Raw sequence reads. 1 records from Nitrate-storing microorganisms in sediments of the Bornholm Basin. 21 records from Pelagic sediment metagenome of Gulf of Khambhat. 5 records from Marine sediment Raw sequence reads. 4 records from MiSeq 16S rRNA gene (Thaumarchaeota 16S rRNA gene) sequences of 12 SCS sediments. 10 records from Bacterial communities from Thrombolites of Lake Sarmiento. 24 records from Boreal lake sediment 16S rRNA gene amplicon (454-pyrosequencing) raw sequence reads. 3 records from Ocean crust Targeted Locus (Loci). 90 records from Microbial community in on-site tsunami sediment caused by the Great East Japan Earthquake. 258 records from Sediment surface microbial community changes due to phytoplankton addition. 41 records from Global Malaspina 2010 deep ocean expedition - rRNA pyrotags. 262 records from Temporal effect of plant diversity and oiling on nitrogen cycling in marsh sediments. 38 records from Sediment samples Raw sequence reads. 10 records from sediment metagenome Raw sequence reads. 30 records from Microbial communities in the phycosphere environment. 72 records from Diversities of bacteria and archaea in Sanya mangrove sediments. 12 records from Seawater metagenome Targeted loci environmental. 2871 records from Soil bacterial diversity is associated with human population density in urban greenspaces. 8 records from Effects of triclosan on bacterial community composition in natural seawater microcosms. 3 records from Porcupine Seabight 16S Ribosomal RNA. 68 records from Indian_sediments. 18 records from Municipal Pensacola Beach Sand Metagenome. 28 records from Soil microbial distribution. 26 records from ZRD sediment metagenome Metagenome. 10 records from marine sediment metagenome Raw sequence reads. 51 records from Nuunat- ORMS formation during oil biodegradation at low temperature. 17 records from soil bacteria and fungi Targeted loci environmental. 2 records from Red Sea Zooplankton Raw sequence reads. 20 records from Microbial ecology of bacteiral community in sediment from adjacent waters of Rushan Bay. 2 records from DSW-2. 1 records from Marine waters Raw sequence reads. 69 records from Thermophilic endospores in temperate sediments. 39 records from Bacterial Biogeography of Coastal Water in the Northern East China Sea. 2 records from Plankton sample collected from Nanaimo Harbour Targeted Locus (Loci). 6 records from Research on Airborne Ice Nucleating Species. 60 records from Heterogeneity of methane seep microbiomes in the NE Pacific. 9 records from Mediterranean mud volcano flow Targeted loci. 2 records from Japan Collection of Microorganisms, RIKEN BioResource Center. 1 records from Sequences obtained from two sponge genera (Hyrtios, Aiolochroia), one zoanthid (Palythoa), and marine sediments. Metagenome. 17 records from marine sediment metagenome Targeted loci environmental. 14 records from South China Sea interfaces 16S amplicon sequencing. 29 records from Marine sediment metagenome. 2 records from Bacterial community diverisity. 1 records from Metagenomes of Sediments from Red Sea Atlantis II and Discovery Deep Brine Pools. 3 records from Sediment Metagenome. 2 records from Diversity and population structure of Marine Group A in the oxygen minimum zone of the Northeast subarctic Pacific Ocean. 11 records from DDCA-metagenome. 2 records from USS-2. 104 records from marine sediment metagenome Targeted loci environmental. 4 records from Successional trajectories of coastal bacterioplankton communities in response to co-exposure of cadmium and phenanthrene. 3 records from Marine plankton Metagenome. 4 records from Prospecting of extreme microbial ecosystems associated to minerals (microbialites, microbial mats and endoevaporites) in Puna, Wetlands and Salars of Argentina, Chile and Bolivia. 1 records from Arctic first-year drift ice and under-ice water bacterial communities. 147 records from Biological Impacts of Ocean Acidification. 7 records from Enrichment of abundant sedimentary Bathyarchaeota demonstrating organoautotrophic metabolic capabilities. 1 records from Microbial diversity of marine sediments from Ross Sea. 1 records from coastal suspended particulate matter North Sea surface Raw sequence reads. 31 records from marine sediment metagenome Raw sequence reads. 1 records from Bacterial diversity in the South Adriatic Sea during winter of 2016. 104 records from Bacterial communities in agricultural soils under contrasting agronomic managements and biomes of Argentina. 96 records from Temperature shifts simulating secondary oil recovery. 4 records from 16S rRNA amplicon sequences of Baltic Sea bacterioplankton. 12 records from Tucurui_Metagenoma_MGRAST. 1 records from UK coast natural seawater Genome sequencing. 1 records from Evaluation of filtration and DNA extraction methods for environmental DNA biodiversity assessments across multiple trophic levels.. 176 records from Queensland Marine Sediment. 3 records from gas hydrate bearing sediment Raw sequence reads. 6 records from Salt marshes sediment microhabitats Metagenome. 2 records from Sediment microbial community Random survey. 5 records from Marine sediment amplicon Targeted loci environmental. 86 records from Microbial diversity before and after tidal re-instatement. 44 records from Camargue soil and sediment 16S community profiling. 10 records from Xylophaga in situ Eclusion Experiment. 1357 records from Soil microbial diversity in the Maintenance of Exotic vs. Native Diversity experiment (depth study). 23 records from ZRM sediment metagenome Metagenome. 5 records from marine metagenome Raw sequence reads. 13 records from Santa Barbara Basin Raw sequence reads. 2 records from archaeal community in Haima cold seep in SCS. 16 records from 16S rRNA metagenomic investigation of arsenotrophic bacteriome of ground water and soil from arsenic-prone area of Bangladesh. 2 records from atmospheric depositon effect on bacterial diversity. 1 records from marine metagenome. 4 records from Newfoundland sediment pyrosequencing. 213 records from Microbial community response on waste water discharge in recipient freshwater sediments. 3 records from Microbial communities associated with ferromanganese nodules and the surrounding sediments. 79 records from This workpackage details only the prokaryote (Archaea and Bacteria) analyses for the MicroPolar project.. 1 records from MiSeq 16S rRNA gene (archaeal 16S rRNA gene) sequences of 4 SCS sediments. 5 records from 1)sediments; 2) coral floc Metagenome. 3 records from marine sediment metagenome Raw sequence reads. 2 records from Seawater Metagenome. 57 records from Hot springs Metagenome. 2 records from Natural seawater bacterial community in exopolysaccharides utilization. 16 records from Microbial community in permeable intertidal sediment. 14 records from Cave sediment Metagenome. 25 records from photoautotrophic_biofilm. 156 records from Depth profile of ancient sediments. 9 records from Marine Sediment Targeted Locus. 2 records from Lake Washington sediment enrichments. 1 records from Characterization of bacterial communities associated With toxic Dinoflagellates: pyrodinium bahamense Var. compressum. 7 records from Microbial diversity and skin mucosal microbiota in farmed Atlantic salmon with ulcerative disorders, raw sequence reads. 8 records from surface sediment Raw sequence reads. 5 records from Microbial indicators of anthropogenic marine pollution identified by 16S and 18S metagenomic library analysis. 2 records from Metagenomics of soil. 337 records from Lake sediment sequencing. 31 records from Microbial diversity in the Tongyeong-Geoje coastal area of Korea. 1 records from DOS-1. 2 records from Nitrogen cycling microbes in the surface sediments of the South China Sea. 2 records from MiSeq 16S rRNA gene (archaeal 16S rRNA gene) sequences of 33 Mai Po sediments, including 18 samples from winter and 15 samples from summer. 6 records from Trichodesmium spiralis associated microbiome Targeted loci. 96 records from Impact of rainforest transformation on phylogenetic and functional diversity of soil prokaryotic communities in Sumatra (Indonesia). 4 records from Saltern microbial community diversity. 12 records from Microbial associations in temperate marine copepods from the Gulf of Maine. 11 records from Illumina high-throughput sequencing of bacterial community. 6 records from Mudflat sediment Metagenome. 11 records from Baltic Sea high-frequency temporal study 2012 at the Linnaeus Microbial Observatory Targeted Locus (Loci). 10 records from Benthic Ocean Acidification. 27 records from ZRCWD sediment metagenome Metagenome. 4 records from microbial diversity Raw sequence reads. 4209 records from Raw sequence reads from soil relic DNA study. 5 records from sea water bacteria Raw sequence reads. 12 records from resuscitation mechanisms during enrichment culture. 73 records from Marine sediment microbial communities in the presence of macrophytes. 1 records from Marine bacteria Targeted Locus (Loci). 64 records from Rifle sediment bacterial community Targeted Locus (Loci). 8 records from California Current System Long Term Ecological Research P1604 (CCS_LTER_P1604) Targeted loci environmental. 14 records from Limited influence of primary treated sewage waters on bacterial abundance, production and community composition in coastal seawaters. 27 records from Bacterial Diversity in the East China Sea. 10 records from CPN Metagenome. 5 records from marine sediment metagenome Raw sequence reads. 67 records from Impact of a major inflow event on the composition and distribution of bacterioplankton communities in the Baltic Sea. 1 records from Bacterial community of cold seeps Metagenome. 11 records from marine metagenome Targeted loci environmental. 3 records from Microbial Diversity in the Southwest Atlantic Ocean and Patagonian Freshwater Bodies. 90 records from Variation in freshwater stream sediment community 16S rRNA profiles along an urbanization gradient. 166 records from Bacteria exposure experiment North Sea. 17 records from Microbial Processes and Biodiversity: OCEAN. 4 records from marine sediment metagenome Raw sequence reads. 2 records from Diversity and composition of sediment microbial assemblages in an Atlantic port environment. 49 records from Freshwater sediment Raw sequence reads. 5 records from A diverse and metabolically active microbial community persists in deep subsurface clay borehole water. 12 records from NEON Surface Water Microbe Marker Gene Sequences - 2014. 1 records from solar evaporation pond sample Metagenome. 30 records from the assembly of abundant and rare bacterioplankton subcommunities in three subtropical bays. 2 records from BSM marine Targeted Locus. 1 records from Extracellular DNA marine sediment Targeted Locus (Loci). 126 records from Sediment of acid mine drainage Targeted loci environmental. 2 records from Microbiome variation in Agaricia undata with distinct depth distribution ranges. 12 records from IMPACT OF SAHARAN DUST DEPOSITION ON BACTERIOPLANKTON IN MARINE SURFACE WATER. 16 records from 16S_Sediment_Bolinao. 1 records from Biological Resource Center, Department of Biotechnology, National Institute of Technology and Evaluation. 2 records from Diversity of SE Pacific benthic Bacteria and Archaea communities Targeted Locus (Loci). 362 records from SCHEMA_Sediment. 2 records from Distribution of the Roseobacter clade. 1 records from Marine metagenome ICM_GPS. 1 records from SB Marine Metagenome. 339 records from Sediment Metagenome Raw sequence reads. 4 records from Microbial diversity studies of Arabian Sea sediment. 2 records from Dark ocean microbial diversity. 17 records from Aarhus Bay Station M5 sediment metagenome sequencing. 8 records from Microbial community of Red Sea (16S amplicon) Targeted Locus (Loci). 6 records from freshwater sediment metagenome Metagenome. 14 records from Metagenomic investigation of six depths from the anchialine Bundera sinkhole. 12 records from Bacterial 16S rRNA and fungal ITS Metagenome. 3 records from NEW-2. 7 records from Sediment bacteria in the Southern Ocean. 676 records from Niche partitioning of methanotrophs in stratified lakes. Data from some individual datasets included in this download may be licensed under less restrictive terms. |
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