Data from: A molecular gut content study of Themisto abyssorum (Amphipoda) from Arctic hydrothermal vent and cold seep systems

The use of DNA as a marker for prey inside the gut of predators has been instrumental in further understanding of known and unknown interactions. Molecular approaches are in particular useful in unavailable environments like the deep-sea. Trophic interactions in the deep-sea are difficult to observe...

Full description

Bibliographic Details
Main Authors: Olsen, Bernt Rydland, Troedsson, Christofer, Hadziavdic, Kenan, Rapp, Hans Tore, Pedersen, Rolf B.
Language:unknown
Published: 2013
Subjects:
Online Access:http://nbn-resolving.org/urn:nbn:nl:ui:13-qd-bfip
https://easy.dans.knaw.nl/ui/datasets/id/easy-dataset:84377
id ftdans:oai:easy.dans.knaw.nl:easy-dataset:84377
record_format openpolar
spelling ftdans:oai:easy.dans.knaw.nl:easy-dataset:84377 2023-07-02T03:31:32+02:00 Data from: A molecular gut content study of Themisto abyssorum (Amphipoda) from Arctic hydrothermal vent and cold seep systems Olsen, Bernt Rydland Troedsson, Christofer Hadziavdic, Kenan Rapp, Hans Tore Pedersen, Rolf B. 2013-09-10T19:13:26.000+02:00 http://nbn-resolving.org/urn:nbn:nl:ui:13-qd-bfip https://easy.dans.knaw.nl/ui/datasets/id/easy-dataset:84377 unknown doi:10.5061/dryad.tm1k0/1 doi:10.5061/dryad.tm1k0/2 doi:10.5061/dryad.tm1k0/3 doi:10.5061/dryad.tm1k0/4 doi:10.5061/dryad.tm1k0/5 doi:10.5061/dryad.tm1k0/6 doi:10.5061/dryad.tm1k0/8 doi:10.5061/dryad.tm1k0/7 doi:10.1111/mec.12511 PMID:24172025 http://nbn-resolving.org/urn:nbn:nl:ui:13-qd-bfip doi:10.5061/dryad.tm1k0 https://easy.dans.knaw.nl/ui/datasets/id/easy-dataset:84377 OPEN_ACCESS: The data are archived in Easy, they are accessible elsewhere through the DOI https://dans.knaw.nl/en/about/organisation-and-policy/legal-information/DANSLicence.pdf Life sciences medicine and health care 2013 ftdans https://doi.org/10.5061/dryad.tm1k0/110.5061/dryad.tm1k0/210.5061/dryad.tm1k0/310.5061/dryad.tm1k0/410.5061/dryad.tm1k0/510.5061/dryad.tm1k0/610.5061/dryad.tm1k0/810.5061/dryad.tm1k0/710.1111/mec.1251110.5061/dryad.tm1k0 2023-06-13T13:10:47Z The use of DNA as a marker for prey inside the gut of predators has been instrumental in further understanding of known and unknown interactions. Molecular approaches are in particular useful in unavailable environments like the deep-sea. Trophic interactions in the deep-sea are difficult to observe in situ, correct deep-sea experimental laboratory conditions are difficult to obtain, animals rarely survive the sampling, or the study organisms feed during the sampling due to long hauls. Preliminary studies of vent and seep systems in the Nordic Seas have identified the temperate-cold water pelagic amphipod Themisto abyssorum as a potentially important predator these chemosynthetic habitats. However, the prey of this deep-sea predator is poorly known, and we applied Denaturing High Performance Liquid Chromatography (DHPLC) to investigate the predator - prey interactions of T. abyssorum in deep-water vent and seep systems. Two deep-water hydrothermally active localities (The Jan Mayen and Loki's Castle vent fields) and one cold seep locality (The Håkon Mosby mud volcano) in the Nordic Seas were sampled, genomic DNA of the stomachs of T. abyssorum was extracted, and 18S rDNA gene was amplified and used to map the stomach content. We found a wide range of organisms including micro-eukaryotes, metazoans and detritus. Themisto abyssorum specimens from Loki's Castle had the highest diversity of prey. The wide range of prey items found suggests that T. abyssorum might be involved in more than one trophic level and should be regarded as an omnivore and not a strict carnivore as have previously been suggested. Other/Unknown Material Arctic Jan Mayen Nordic Seas Themisto abyssorum Themisto Data Archiving and Networked Services (DANS): EASY (KNAW - Koninklijke Nederlandse Akademie van Wetenschappen) Arctic Jan Mayen
institution Open Polar
collection Data Archiving and Networked Services (DANS): EASY (KNAW - Koninklijke Nederlandse Akademie van Wetenschappen)
op_collection_id ftdans
language unknown
topic Life sciences
medicine and health care
spellingShingle Life sciences
medicine and health care
Olsen, Bernt Rydland
Troedsson, Christofer
Hadziavdic, Kenan
Rapp, Hans Tore
Pedersen, Rolf B.
Data from: A molecular gut content study of Themisto abyssorum (Amphipoda) from Arctic hydrothermal vent and cold seep systems
topic_facet Life sciences
medicine and health care
description The use of DNA as a marker for prey inside the gut of predators has been instrumental in further understanding of known and unknown interactions. Molecular approaches are in particular useful in unavailable environments like the deep-sea. Trophic interactions in the deep-sea are difficult to observe in situ, correct deep-sea experimental laboratory conditions are difficult to obtain, animals rarely survive the sampling, or the study organisms feed during the sampling due to long hauls. Preliminary studies of vent and seep systems in the Nordic Seas have identified the temperate-cold water pelagic amphipod Themisto abyssorum as a potentially important predator these chemosynthetic habitats. However, the prey of this deep-sea predator is poorly known, and we applied Denaturing High Performance Liquid Chromatography (DHPLC) to investigate the predator - prey interactions of T. abyssorum in deep-water vent and seep systems. Two deep-water hydrothermally active localities (The Jan Mayen and Loki's Castle vent fields) and one cold seep locality (The Håkon Mosby mud volcano) in the Nordic Seas were sampled, genomic DNA of the stomachs of T. abyssorum was extracted, and 18S rDNA gene was amplified and used to map the stomach content. We found a wide range of organisms including micro-eukaryotes, metazoans and detritus. Themisto abyssorum specimens from Loki's Castle had the highest diversity of prey. The wide range of prey items found suggests that T. abyssorum might be involved in more than one trophic level and should be regarded as an omnivore and not a strict carnivore as have previously been suggested.
author Olsen, Bernt Rydland
Troedsson, Christofer
Hadziavdic, Kenan
Rapp, Hans Tore
Pedersen, Rolf B.
author_facet Olsen, Bernt Rydland
Troedsson, Christofer
Hadziavdic, Kenan
Rapp, Hans Tore
Pedersen, Rolf B.
author_sort Olsen, Bernt Rydland
title Data from: A molecular gut content study of Themisto abyssorum (Amphipoda) from Arctic hydrothermal vent and cold seep systems
title_short Data from: A molecular gut content study of Themisto abyssorum (Amphipoda) from Arctic hydrothermal vent and cold seep systems
title_full Data from: A molecular gut content study of Themisto abyssorum (Amphipoda) from Arctic hydrothermal vent and cold seep systems
title_fullStr Data from: A molecular gut content study of Themisto abyssorum (Amphipoda) from Arctic hydrothermal vent and cold seep systems
title_full_unstemmed Data from: A molecular gut content study of Themisto abyssorum (Amphipoda) from Arctic hydrothermal vent and cold seep systems
title_sort data from: a molecular gut content study of themisto abyssorum (amphipoda) from arctic hydrothermal vent and cold seep systems
publishDate 2013
url http://nbn-resolving.org/urn:nbn:nl:ui:13-qd-bfip
https://easy.dans.knaw.nl/ui/datasets/id/easy-dataset:84377
geographic Arctic
Jan Mayen
geographic_facet Arctic
Jan Mayen
genre Arctic
Jan Mayen
Nordic Seas
Themisto abyssorum
Themisto
genre_facet Arctic
Jan Mayen
Nordic Seas
Themisto abyssorum
Themisto
op_relation doi:10.5061/dryad.tm1k0/1
doi:10.5061/dryad.tm1k0/2
doi:10.5061/dryad.tm1k0/3
doi:10.5061/dryad.tm1k0/4
doi:10.5061/dryad.tm1k0/5
doi:10.5061/dryad.tm1k0/6
doi:10.5061/dryad.tm1k0/8
doi:10.5061/dryad.tm1k0/7
doi:10.1111/mec.12511
PMID:24172025
http://nbn-resolving.org/urn:nbn:nl:ui:13-qd-bfip
doi:10.5061/dryad.tm1k0
https://easy.dans.knaw.nl/ui/datasets/id/easy-dataset:84377
op_rights OPEN_ACCESS: The data are archived in Easy, they are accessible elsewhere through the DOI
https://dans.knaw.nl/en/about/organisation-and-policy/legal-information/DANSLicence.pdf
op_doi https://doi.org/10.5061/dryad.tm1k0/110.5061/dryad.tm1k0/210.5061/dryad.tm1k0/310.5061/dryad.tm1k0/410.5061/dryad.tm1k0/510.5061/dryad.tm1k0/610.5061/dryad.tm1k0/810.5061/dryad.tm1k0/710.1111/mec.1251110.5061/dryad.tm1k0
_version_ 1770270905806618624