Data from: Using a reference population yardstick to calibrate and compare genetic diversity reported in different studies: an example from the brown bear.

In species with large geographic ranges, genetic diversity of different populations may be well studied, but differences in loci and sample sizes can make the results of different studies difficult to compare. Yet, such comparisons are important for assessing the status of populations of conservatio...

Full description

Bibliographic Details
Main Authors: Skrbinšek, Tomaž, Jelenčič, Maja, Waits, Lisette P., Potočnik, Hubert, Trontelj, Peter
Language:unknown
Published: 2012
Subjects:
Online Access:http://nbn-resolving.org/urn:nbn:nl:ui:13-02-js0l
https://easy.dans.knaw.nl/ui/datasets/id/easy-dataset:81596
_version_ 1821735690556145664
author Skrbinšek, Tomaž
Jelenčič, Maja
Waits, Lisette P.
Potočnik, Hubert
Trontelj, Peter
author_facet Skrbinšek, Tomaž
Jelenčič, Maja
Waits, Lisette P.
Potočnik, Hubert
Trontelj, Peter
author_sort Skrbinšek, Tomaž
collection Data Archiving and Networked Services (DANS): EASY (KNAW)
description In species with large geographic ranges, genetic diversity of different populations may be well studied, but differences in loci and sample sizes can make the results of different studies difficult to compare. Yet, such comparisons are important for assessing the status of populations of conservation concern. We propose a simple approach of using a single well-studied reference population as a "yardstick" to calibrate results of different studies to the same scale, enabling comparisons. We use a well-studied large carnivore, the brown bear (Ursus arctos), as a case study to demonstrate the approach. As a reference population, we genotyped 513 brown bears from Slovenia using 20 polymorphic microsatellite loci. We used this dataset to calibrate and compare heterozygosity and allelic richness for 30 brown bear populations from 10 different studies across the global distribution of the species. The simplicity of the reference population approach makes it useful for other species, enabling comparisons of genetic diversity estimates between previously incompatible studies and improving our understanding of how genetic diversity is distributed along a species range.
genre Ursus arctos
genre_facet Ursus arctos
id ftdans:oai:easy.dans.knaw.nl:easy-dataset:81596
institution Open Polar
language unknown
op_collection_id ftdans
op_doi https://doi.org/10.5061/dryad.qt3j5/110.5061/dryad.qt3j5/210.5061/dryad.qt3j5/310.5061/dryad.qt3j5/410.1038/hdy.2012.4210.5061/dryad.qt3j5
op_relation doi:10.5061/dryad.qt3j5/1
doi:10.5061/dryad.qt3j5/2
doi:10.5061/dryad.qt3j5/3
doi:10.5061/dryad.qt3j5/4
doi:10.1038/hdy.2012.42
PMID:22850697
http://nbn-resolving.org/urn:nbn:nl:ui:13-02-js0l
doi:10.5061/dryad.qt3j5
https://easy.dans.knaw.nl/ui/datasets/id/easy-dataset:81596
op_rights OPEN_ACCESS: The data are archived in Easy, they are accessible elsewhere through the DOI
https://dans.knaw.nl/en/about/organisation-and-policy/legal-information/DANSLicence.pdf
publishDate 2012
record_format openpolar
spelling ftdans:oai:easy.dans.knaw.nl:easy-dataset:81596 2025-01-17T01:14:46+00:00 Data from: Using a reference population yardstick to calibrate and compare genetic diversity reported in different studies: an example from the brown bear. Skrbinšek, Tomaž Jelenčič, Maja Waits, Lisette P. Potočnik, Hubert Trontelj, Peter 2012-07-07T00:16:49.000+02:00 http://nbn-resolving.org/urn:nbn:nl:ui:13-02-js0l https://easy.dans.knaw.nl/ui/datasets/id/easy-dataset:81596 unknown doi:10.5061/dryad.qt3j5/1 doi:10.5061/dryad.qt3j5/2 doi:10.5061/dryad.qt3j5/3 doi:10.5061/dryad.qt3j5/4 doi:10.1038/hdy.2012.42 PMID:22850697 http://nbn-resolving.org/urn:nbn:nl:ui:13-02-js0l doi:10.5061/dryad.qt3j5 https://easy.dans.knaw.nl/ui/datasets/id/easy-dataset:81596 OPEN_ACCESS: The data are archived in Easy, they are accessible elsewhere through the DOI https://dans.knaw.nl/en/about/organisation-and-policy/legal-information/DANSLicence.pdf Life sciences medicine and health care 2012 ftdans https://doi.org/10.5061/dryad.qt3j5/110.5061/dryad.qt3j5/210.5061/dryad.qt3j5/310.5061/dryad.qt3j5/410.1038/hdy.2012.4210.5061/dryad.qt3j5 2023-06-13T13:02:24Z In species with large geographic ranges, genetic diversity of different populations may be well studied, but differences in loci and sample sizes can make the results of different studies difficult to compare. Yet, such comparisons are important for assessing the status of populations of conservation concern. We propose a simple approach of using a single well-studied reference population as a "yardstick" to calibrate results of different studies to the same scale, enabling comparisons. We use a well-studied large carnivore, the brown bear (Ursus arctos), as a case study to demonstrate the approach. As a reference population, we genotyped 513 brown bears from Slovenia using 20 polymorphic microsatellite loci. We used this dataset to calibrate and compare heterozygosity and allelic richness for 30 brown bear populations from 10 different studies across the global distribution of the species. The simplicity of the reference population approach makes it useful for other species, enabling comparisons of genetic diversity estimates between previously incompatible studies and improving our understanding of how genetic diversity is distributed along a species range. Other/Unknown Material Ursus arctos Data Archiving and Networked Services (DANS): EASY (KNAW)
spellingShingle Life sciences
medicine and health care
Skrbinšek, Tomaž
Jelenčič, Maja
Waits, Lisette P.
Potočnik, Hubert
Trontelj, Peter
Data from: Using a reference population yardstick to calibrate and compare genetic diversity reported in different studies: an example from the brown bear.
title Data from: Using a reference population yardstick to calibrate and compare genetic diversity reported in different studies: an example from the brown bear.
title_full Data from: Using a reference population yardstick to calibrate and compare genetic diversity reported in different studies: an example from the brown bear.
title_fullStr Data from: Using a reference population yardstick to calibrate and compare genetic diversity reported in different studies: an example from the brown bear.
title_full_unstemmed Data from: Using a reference population yardstick to calibrate and compare genetic diversity reported in different studies: an example from the brown bear.
title_short Data from: Using a reference population yardstick to calibrate and compare genetic diversity reported in different studies: an example from the brown bear.
title_sort data from: using a reference population yardstick to calibrate and compare genetic diversity reported in different studies: an example from the brown bear.
topic Life sciences
medicine and health care
topic_facet Life sciences
medicine and health care
url http://nbn-resolving.org/urn:nbn:nl:ui:13-02-js0l
https://easy.dans.knaw.nl/ui/datasets/id/easy-dataset:81596