Ringed seal (Phoca hispida) induced multipotent stem cells transcriptome analysis data

We generated ringed seal (Phoca hispida) induced multipotent stem cells from fibroblasts by overexpression of human transgenes: OCT4, SOX2, KLF4 and c-MYC. The resulting cell line, iPHIS1, had the expression of pluripotency marker gene Rex1. Differentiation in embryoid body-like structures allowed u...

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Main Author: Menzorov, A (via Mendeley Data)
Language:unknown
Published: 2021
Subjects:
Online Access:http://nbn-resolving.org/urn:nbn:nl:ui:13-49-0ggi
https://easy.dans.knaw.nl/ui/datasets/id/easy-dataset:207097
id ftdans:oai:easy.dans.knaw.nl:easy-dataset:207097
record_format openpolar
spelling ftdans:oai:easy.dans.knaw.nl:easy-dataset:207097 2024-06-23T07:56:10+00:00 Ringed seal (Phoca hispida) induced multipotent stem cells transcriptome analysis data Menzorov, A (via Mendeley Data) 2021-04-09T08:27:25.149Z http://nbn-resolving.org/urn:nbn:nl:ui:13-49-0ggi https://easy.dans.knaw.nl/ui/datasets/id/easy-dataset:207097 unknown 2 5mkvk5yc4w http://nbn-resolving.org/urn:nbn:nl:ui:13-49-0ggi doi:10.17632/5mkvk5yc4w.2 https://easy.dans.knaw.nl/ui/datasets/id/easy-dataset:207097 OPEN_ACCESS: The data are archived in Easy, they are accessible elsewhere through the DOI https://dans.knaw.nl/en/about/organisation-and-policy/legal-information/DANSLicence.pdf Aleksei Menzorov Interdisciplinary sciences 2021 ftdans https://doi.org/10.17632/5mkvk5yc4w.2 2024-06-11T04:08:50Z We generated ringed seal (Phoca hispida) induced multipotent stem cells from fibroblasts by overexpression of human transgenes: OCT4, SOX2, KLF4 and c-MYC. The resulting cell line, iPHIS1, had the expression of pluripotency marker gene Rex1. Differentiation in embryoid body-like structures allowed us to register expression of AFP, endoderm marker, and Cdx2, trophectoderm marker, but not neuronal (ectoderm) markers. The cells readily differentiated into adipocytes and osteocytes, mesoderm cell types of origin. Transcriptome analysis allowed us to conclude that the cell line does not resemble human pluripotent cells, and, therefore, most probably are not pluripotent. Thus, we produced ringed seal multipotent stem cell line capable of differentiation into adipo- and osteocytes. The raw sequence data are available in NCBI BioProject repository, accession number: PRJNA718133, link: https://www.ncbi.nlm.nih.gov/bioproject/PRJNA718133. The data below represents transcriptome analysis. Other/Unknown Material Phoca hispida ringed seal Data Archiving and Networked Services (DANS): EASY (KNAW - Koninklijke Nederlandse Akademie van Wetenschappen)
institution Open Polar
collection Data Archiving and Networked Services (DANS): EASY (KNAW - Koninklijke Nederlandse Akademie van Wetenschappen)
op_collection_id ftdans
language unknown
topic Interdisciplinary sciences
spellingShingle Interdisciplinary sciences
Menzorov, A (via Mendeley Data)
Ringed seal (Phoca hispida) induced multipotent stem cells transcriptome analysis data
topic_facet Interdisciplinary sciences
description We generated ringed seal (Phoca hispida) induced multipotent stem cells from fibroblasts by overexpression of human transgenes: OCT4, SOX2, KLF4 and c-MYC. The resulting cell line, iPHIS1, had the expression of pluripotency marker gene Rex1. Differentiation in embryoid body-like structures allowed us to register expression of AFP, endoderm marker, and Cdx2, trophectoderm marker, but not neuronal (ectoderm) markers. The cells readily differentiated into adipocytes and osteocytes, mesoderm cell types of origin. Transcriptome analysis allowed us to conclude that the cell line does not resemble human pluripotent cells, and, therefore, most probably are not pluripotent. Thus, we produced ringed seal multipotent stem cell line capable of differentiation into adipo- and osteocytes. The raw sequence data are available in NCBI BioProject repository, accession number: PRJNA718133, link: https://www.ncbi.nlm.nih.gov/bioproject/PRJNA718133. The data below represents transcriptome analysis.
author Menzorov, A (via Mendeley Data)
author_facet Menzorov, A (via Mendeley Data)
author_sort Menzorov, A (via Mendeley Data)
title Ringed seal (Phoca hispida) induced multipotent stem cells transcriptome analysis data
title_short Ringed seal (Phoca hispida) induced multipotent stem cells transcriptome analysis data
title_full Ringed seal (Phoca hispida) induced multipotent stem cells transcriptome analysis data
title_fullStr Ringed seal (Phoca hispida) induced multipotent stem cells transcriptome analysis data
title_full_unstemmed Ringed seal (Phoca hispida) induced multipotent stem cells transcriptome analysis data
title_sort ringed seal (phoca hispida) induced multipotent stem cells transcriptome analysis data
publishDate 2021
url http://nbn-resolving.org/urn:nbn:nl:ui:13-49-0ggi
https://easy.dans.knaw.nl/ui/datasets/id/easy-dataset:207097
genre Phoca hispida
ringed seal
genre_facet Phoca hispida
ringed seal
op_relation 2
5mkvk5yc4w
http://nbn-resolving.org/urn:nbn:nl:ui:13-49-0ggi
doi:10.17632/5mkvk5yc4w.2
https://easy.dans.knaw.nl/ui/datasets/id/easy-dataset:207097
op_rights OPEN_ACCESS: The data are archived in Easy, they are accessible elsewhere through the DOI
https://dans.knaw.nl/en/about/organisation-and-policy/legal-information/DANSLicence.pdf
Aleksei Menzorov
op_doi https://doi.org/10.17632/5mkvk5yc4w.2
_version_ 1802649095797473280