The mitochondrial genome and ribosomal operon of Brachycladium goliath (Digenea: Brachycladiidae) recovered from a stranded minke whale
Members of the Brachycladiidae are known to cause pathologies implicated in cetacean strandings and it is important to develop accurate diagnostic markers to differentiate these and other helminths found in cetaceans. Brachycladium goliath (van Beneden, 1858) is a large trematode found, as adults, u...
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ftczacademyscien:oai:asep.lib.cas.cz:CavUnEpca/0461836 2024-09-09T19:31:33+00:00 The mitochondrial genome and ribosomal operon of Brachycladium goliath (Digenea: Brachycladiidae) recovered from a stranded minke whale Briscoe, A.G. Bray, R. A. Brabec, J. (Jan) Littlewood, D. T. J. 2016 https://doi.org/10.1016/j.parint.2016.02.004 http://hdl.handle.net/11104/0267766 eng eng info:eu-repo/semantics/altIdentifier/pmid/26883466 doi:10.1016/j.parint.2016.02.004 urn:pissn: 1383-5769 urn:eissn: 1873-0329 http://hdl.handle.net/11104/0267766 Digenea Balaenoptera acutorostrata Cetacea Hologenophore NGS info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion 2016 ftczacademyscien https://doi.org/10.1016/j.parint.2016.02.004 2024-08-19T05:33:00Z Members of the Brachycladiidae are known to cause pathologies implicated in cetacean strandings and it is important to develop accurate diagnostic markers to differentiate these and other helminths found in cetaceans. Brachycladium goliath (van Beneden, 1858) is a large trematode found, as adults, usually in the hepatic (bile) and pancreatic ducts of various cetaceans. Complete sequences were determined for the entire mitochondrial genome, and phylogenetically informative nuclear genes contained within the ribosomal operon, from a small piece of an individual worm taken from a common minke whale Balaenoptera acutorostrata Lacepede, 1804. Genomic DNA was sequenced using an Illumina MiSeq platform. The mtDNA is 15,229 bp in length consisting of 12 protein-coding genes, 22 tRNA genes, 2 rRNA genes and 2 non-coding regions of which the larger is comprised of 4 tandemly repeated units (260 bp each). The ribosomal RNA operon is 9297 bp long. These data provide a rich resource of molecular markers for diagnostics, phylogenetics and population genetics in order to better understand the role, and associated pathology of helminth infections in cetaceans. Article in Journal/Newspaper Balaenoptera acutorostrata minke whale The Czech Academy of Sciences: Publication Activity (ASEP) Beneden ENVELOPE(-62.700,-62.700,-64.767,-64.767) Van Beneden ENVELOPE(-62.700,-62.700,-64.767,-64.767) Parasitology International 65 3 271 275 |
institution |
Open Polar |
collection |
The Czech Academy of Sciences: Publication Activity (ASEP) |
op_collection_id |
ftczacademyscien |
language |
English |
topic |
Digenea Balaenoptera acutorostrata Cetacea Hologenophore NGS |
spellingShingle |
Digenea Balaenoptera acutorostrata Cetacea Hologenophore NGS Briscoe, A.G. Bray, R. A. Brabec, J. (Jan) Littlewood, D. T. J. The mitochondrial genome and ribosomal operon of Brachycladium goliath (Digenea: Brachycladiidae) recovered from a stranded minke whale |
topic_facet |
Digenea Balaenoptera acutorostrata Cetacea Hologenophore NGS |
description |
Members of the Brachycladiidae are known to cause pathologies implicated in cetacean strandings and it is important to develop accurate diagnostic markers to differentiate these and other helminths found in cetaceans. Brachycladium goliath (van Beneden, 1858) is a large trematode found, as adults, usually in the hepatic (bile) and pancreatic ducts of various cetaceans. Complete sequences were determined for the entire mitochondrial genome, and phylogenetically informative nuclear genes contained within the ribosomal operon, from a small piece of an individual worm taken from a common minke whale Balaenoptera acutorostrata Lacepede, 1804. Genomic DNA was sequenced using an Illumina MiSeq platform. The mtDNA is 15,229 bp in length consisting of 12 protein-coding genes, 22 tRNA genes, 2 rRNA genes and 2 non-coding regions of which the larger is comprised of 4 tandemly repeated units (260 bp each). The ribosomal RNA operon is 9297 bp long. These data provide a rich resource of molecular markers for diagnostics, phylogenetics and population genetics in order to better understand the role, and associated pathology of helminth infections in cetaceans. |
format |
Article in Journal/Newspaper |
author |
Briscoe, A.G. Bray, R. A. Brabec, J. (Jan) Littlewood, D. T. J. |
author_facet |
Briscoe, A.G. Bray, R. A. Brabec, J. (Jan) Littlewood, D. T. J. |
author_sort |
Briscoe, A.G. |
title |
The mitochondrial genome and ribosomal operon of Brachycladium goliath (Digenea: Brachycladiidae) recovered from a stranded minke whale |
title_short |
The mitochondrial genome and ribosomal operon of Brachycladium goliath (Digenea: Brachycladiidae) recovered from a stranded minke whale |
title_full |
The mitochondrial genome and ribosomal operon of Brachycladium goliath (Digenea: Brachycladiidae) recovered from a stranded minke whale |
title_fullStr |
The mitochondrial genome and ribosomal operon of Brachycladium goliath (Digenea: Brachycladiidae) recovered from a stranded minke whale |
title_full_unstemmed |
The mitochondrial genome and ribosomal operon of Brachycladium goliath (Digenea: Brachycladiidae) recovered from a stranded minke whale |
title_sort |
mitochondrial genome and ribosomal operon of brachycladium goliath (digenea: brachycladiidae) recovered from a stranded minke whale |
publishDate |
2016 |
url |
https://doi.org/10.1016/j.parint.2016.02.004 http://hdl.handle.net/11104/0267766 |
long_lat |
ENVELOPE(-62.700,-62.700,-64.767,-64.767) ENVELOPE(-62.700,-62.700,-64.767,-64.767) |
geographic |
Beneden Van Beneden |
geographic_facet |
Beneden Van Beneden |
genre |
Balaenoptera acutorostrata minke whale |
genre_facet |
Balaenoptera acutorostrata minke whale |
op_relation |
info:eu-repo/semantics/altIdentifier/pmid/26883466 doi:10.1016/j.parint.2016.02.004 urn:pissn: 1383-5769 urn:eissn: 1873-0329 http://hdl.handle.net/11104/0267766 |
op_doi |
https://doi.org/10.1016/j.parint.2016.02.004 |
container_title |
Parasitology International |
container_volume |
65 |
container_issue |
3 |
container_start_page |
271 |
op_container_end_page |
275 |
_version_ |
1809900370337464320 |