Identification of quantitative trait loci associated with resistance to viral haemorrhagic septicaemia (VHS) in turbot (Scophthalmus maximus) A comparison between bacterium, parasite and virus diseases

One of the main objectives of genetic breeding programs in turbot industry is to reduce disease-related mortality. In the present study, a genome scan to detect quantitative trait loci (QTL) affecting resistance and survival to viral haemorrhagic septicaemia (VHS) was carried out. Three full-sib fam...

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Published in:Marine Biotechnology
Main Authors: Rodríguez-Ramilo, S. T., De La Herrán, R., Ruiz-Rejón, C., Hermida, M., Fernández, C., Pereiro, P., Figueras, A., Bouza, C., Toro, M. A., Martínez, P., Fernández, J.
Format: Article in Journal/Newspaper
Language:English
Published: Springer 2014
Subjects:
Online Access:https://hdl.handle.net/20.500.12792/3846
http://hdl.handle.net/10261/293242
https://doi.org/10.1007/s10126-013-9544-x
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author Rodríguez-Ramilo, S. T.
De La Herrán, R.
Ruiz-Rejón, C.
Hermida, M.
Fernández, C.
Pereiro, P.
Figueras, A.
Bouza, C.
Toro, M. A.
Martínez, P.
Fernández, J.
author_facet Rodríguez-Ramilo, S. T.
De La Herrán, R.
Ruiz-Rejón, C.
Hermida, M.
Fernández, C.
Pereiro, P.
Figueras, A.
Bouza, C.
Toro, M. A.
Martínez, P.
Fernández, J.
author_sort Rodríguez-Ramilo, S. T.
collection Digital.CSIC (Spanish National Research Council)
container_issue 3
container_start_page 265
container_title Marine Biotechnology
container_volume 16
description One of the main objectives of genetic breeding programs in turbot industry is to reduce disease-related mortality. In the present study, a genome scan to detect quantitative trait loci (QTL) affecting resistance and survival to viral haemorrhagic septicaemia (VHS) was carried out. Three full-sib families with approximately 90 individuals each were genotyped and evaluated by linear regression and maximum likelihood approaches. In addition, a comparison between QTL detected for resistance and survival time to other important bacterial and parasite diseases affecting turbot (furunculosis and scuticociliatosis) was also carried out. Finally, the relationship between QTL affecting resistance/survival time to the virus and growth-related QTL was also evaluated. Several genomic regions controlling resistance and survival time to VHS were detected. Also significant associations between the evaluated traits and genotypes at particular markers were identified, explaining up to 14 % of the phenotypic variance. Several genomic regions controlling general and specific resistance to different diseases in turbot were detected. A preliminary gene mining approach identified candidate genes related to general or specific immunity. This information will be valuable to develop marker-assisted selection programs and to discover candidate genes related to disease resistance to improve turbot production. © 2013 Springer Science+Business Media New York.
format Article in Journal/Newspaper
genre Scophthalmus maximus
Turbot
genre_facet Scophthalmus maximus
Turbot
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institution Open Polar
language English
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op_doi https://doi.org/20.500.12792/384610.1007/s10126-013-9544-x
op_relation Marine Biotechnology 16: 265-276 (2014)
1436-2228
http://hdl.handle.net/20.500.12792/3846
http://hdl.handle.net/10261/293242
doi:10.1007/s10126-013-9544-x
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spelling ftcsic:oai:digital.csic.es:10261/293242 2025-01-17T00:41:18+00:00 Identification of quantitative trait loci associated with resistance to viral haemorrhagic septicaemia (VHS) in turbot (Scophthalmus maximus) A comparison between bacterium, parasite and virus diseases Rodríguez-Ramilo, S. T. De La Herrán, R. Ruiz-Rejón, C. Hermida, M. Fernández, C. Pereiro, P. Figueras, A. Bouza, C. Toro, M. A. Martínez, P. Fernández, J. 2014 https://hdl.handle.net/20.500.12792/3846 http://hdl.handle.net/10261/293242 https://doi.org/10.1007/s10126-013-9544-x en eng Springer Marine Biotechnology 16: 265-276 (2014) 1436-2228 http://hdl.handle.net/20.500.12792/3846 http://hdl.handle.net/10261/293242 doi:10.1007/s10126-013-9544-x 1436-2236 none QTL Turbot Viral haemorrhagic septicaemia Linear regression Maximum likelihood journal article 2014 ftcsic https://doi.org/20.500.12792/384610.1007/s10126-013-9544-x 2024-01-16T11:36:37Z One of the main objectives of genetic breeding programs in turbot industry is to reduce disease-related mortality. In the present study, a genome scan to detect quantitative trait loci (QTL) affecting resistance and survival to viral haemorrhagic septicaemia (VHS) was carried out. Three full-sib families with approximately 90 individuals each were genotyped and evaluated by linear regression and maximum likelihood approaches. In addition, a comparison between QTL detected for resistance and survival time to other important bacterial and parasite diseases affecting turbot (furunculosis and scuticociliatosis) was also carried out. Finally, the relationship between QTL affecting resistance/survival time to the virus and growth-related QTL was also evaluated. Several genomic regions controlling resistance and survival time to VHS were detected. Also significant associations between the evaluated traits and genotypes at particular markers were identified, explaining up to 14 % of the phenotypic variance. Several genomic regions controlling general and specific resistance to different diseases in turbot were detected. A preliminary gene mining approach identified candidate genes related to general or specific immunity. This information will be valuable to develop marker-assisted selection programs and to discover candidate genes related to disease resistance to improve turbot production. © 2013 Springer Science+Business Media New York. Article in Journal/Newspaper Scophthalmus maximus Turbot Digital.CSIC (Spanish National Research Council) Marine Biotechnology 16 3 265 276
spellingShingle QTL
Turbot
Viral haemorrhagic septicaemia
Linear regression
Maximum likelihood
Rodríguez-Ramilo, S. T.
De La Herrán, R.
Ruiz-Rejón, C.
Hermida, M.
Fernández, C.
Pereiro, P.
Figueras, A.
Bouza, C.
Toro, M. A.
Martínez, P.
Fernández, J.
Identification of quantitative trait loci associated with resistance to viral haemorrhagic septicaemia (VHS) in turbot (Scophthalmus maximus) A comparison between bacterium, parasite and virus diseases
title Identification of quantitative trait loci associated with resistance to viral haemorrhagic septicaemia (VHS) in turbot (Scophthalmus maximus) A comparison between bacterium, parasite and virus diseases
title_full Identification of quantitative trait loci associated with resistance to viral haemorrhagic septicaemia (VHS) in turbot (Scophthalmus maximus) A comparison between bacterium, parasite and virus diseases
title_fullStr Identification of quantitative trait loci associated with resistance to viral haemorrhagic septicaemia (VHS) in turbot (Scophthalmus maximus) A comparison between bacterium, parasite and virus diseases
title_full_unstemmed Identification of quantitative trait loci associated with resistance to viral haemorrhagic septicaemia (VHS) in turbot (Scophthalmus maximus) A comparison between bacterium, parasite and virus diseases
title_short Identification of quantitative trait loci associated with resistance to viral haemorrhagic septicaemia (VHS) in turbot (Scophthalmus maximus) A comparison between bacterium, parasite and virus diseases
title_sort identification of quantitative trait loci associated with resistance to viral haemorrhagic septicaemia (vhs) in turbot (scophthalmus maximus) a comparison between bacterium, parasite and virus diseases
topic QTL
Turbot
Viral haemorrhagic septicaemia
Linear regression
Maximum likelihood
topic_facet QTL
Turbot
Viral haemorrhagic septicaemia
Linear regression
Maximum likelihood
url https://hdl.handle.net/20.500.12792/3846
http://hdl.handle.net/10261/293242
https://doi.org/10.1007/s10126-013-9544-x