Phylogenetic diversity and dominant ecological traits of freshwater Antarctic Chrysophyceae

17 pages, 6 figures, 3 tables, supplementary information https://doi.org/10.1007/s00300-021-02850-3 Previous studies conducted in summer in the lakes at Hope Bay (Antarctic Peninsula) between 1991 and 2007 showed a large numerical contribution of flagellated Chrysophyceae to the phytoplankton commun...

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Published in:Polar Biology
Main Authors: Izaguirre, Irina, Unrein, Fernando, Schiaffino, M. Romina, Lara, Enrique, Singer, David, Balagué, Vanessa, Gasol, Josep M., Massana, Ramon
Other Authors: Dirección Nacional del Antártico (Argentina), Universidad de Buenos Aires, CSIC - Instituto de Ciencias del Mar (ICM), Consejo Nacional de Investigaciones Científicas y Técnicas (Argentina), Ministerio de Educación, Cultura y Deporte (España), Comunidad de Madrid, Swiss National Science Foundation, Agencia Estatal de Investigación (España)
Format: Article in Journal/Newspaper
Language:English
Published: Springer 2021
Subjects:
Online Access:http://hdl.handle.net/10261/242257
https://doi.org/10.1007/s00300-021-02850-3
https://doi.org/10.13039/501100005363
https://doi.org/10.13039/501100003176
https://doi.org/10.13039/501100002923
https://doi.org/10.13039/100012818
https://doi.org/10.13039/501100011033
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spelling ftcsic:oai:digital.csic.es:10261/242257 2024-02-11T09:58:31+01:00 Phylogenetic diversity and dominant ecological traits of freshwater Antarctic Chrysophyceae Izaguirre, Irina Unrein, Fernando Schiaffino, M. Romina Lara, Enrique Singer, David Balagué, Vanessa Gasol, Josep M. Massana, Ramon Dirección Nacional del Antártico (Argentina) Universidad de Buenos Aires CSIC - Instituto de Ciencias del Mar (ICM) Consejo Nacional de Investigaciones Científicas y Técnicas (Argentina) Ministerio de Educación, Cultura y Deporte (España) Comunidad de Madrid Swiss National Science Foundation Agencia Estatal de Investigación (España) 2021-04 http://hdl.handle.net/10261/242257 https://doi.org/10.1007/s00300-021-02850-3 https://doi.org/10.13039/501100005363 https://doi.org/10.13039/501100003176 https://doi.org/10.13039/501100002923 https://doi.org/10.13039/100012818 https://doi.org/10.13039/501100011033 en eng Springer Postprint https://doi.org/10.1007/s00300-021-02850-3 Sí Polar Biology 44: 941-957 (2021) 0722-4060 CEX2019-000928-S http://hdl.handle.net/10261/242257 doi:10.1007/s00300-021-02850-3 1432-2056 http://dx.doi.org/10.13039/501100005363 http://dx.doi.org/10.13039/501100003176 http://dx.doi.org/10.13039/501100002923 http://dx.doi.org/10.13039/100012818 http://dx.doi.org/10.13039/501100011033 open Chrysophyceae Antarctic lakes Clone libraries 18S Illumina HiSeq Molecular and functional diversity artículo http://purl.org/coar/resource_type/c_6501 2021 ftcsic https://doi.org/10.1007/s00300-021-02850-310.13039/50110000536310.13039/50110000317610.13039/50110000292310.13039/10001281810.13039/501100011033 2024-01-16T11:09:18Z 17 pages, 6 figures, 3 tables, supplementary information https://doi.org/10.1007/s00300-021-02850-3 Previous studies conducted in summer in the lakes at Hope Bay (Antarctic Peninsula) between 1991 and 2007 showed a large numerical contribution of flagellated Chrysophyceae to the phytoplankton communities, particularly in the oligotrophic lakes, as evidenced by light microscopy observations and molecular fingerprinting. Given the ecological relevance of this group in these Antarctic microbial foodwebs, we carried out further molecular analyses (clone libraries and 18S Illumina high throughput sequencing) to characterize their phylogenetic diversity. The results of this study significantly increased the retrieved Chrysophyceae biodiversity. Clone libraries in two selected lakes (one oligotrophic and one mesotrophic) yielded 12 different chrysophycean OTUs, whereas 81 Swarm OTUs were recovered from six lakes using Illumina HiSeq. With the combination of both methods, we observed sequences of all the chrysophyte known clades, although most of the diversity belonged to Clade D, a group comprising mixotrophic and heterotrophic species. The percentage of reads for this clade in Illumina HiSeq ranged from 30% to 96% of the total Chrysophyceae reads. Based on experiments and observations, we also describe the main ecological traits of this group: the dominant taxa were small pigmented flagellates, well adapted to survive in oligotrophic systems, sometimes abundant under ice-cover subjected to low light intensities, and that have phagotrophic behavior. The used combination of methods allowed us to characterize the biodiversity and ecology of the Chrysophyceae, the dominant phytoplankton group in the oligotrophic lakes of this Maritime Antarctic region The Antarctic expeditions were supported by the Dirección Nacional del Antártico (DNA) of Argentina, within the framework of a cooperative project between this institution, University of Buenos Aires and the Institut de Ciències del Mar (ICM)-CSIC. The investigations ... Article in Journal/Newspaper Antarc* Antarctic Antarctic Peninsula Dirección Nacional del Antártico Polar Biology Digital.CSIC (Spanish National Research Council) Antarctic Antarctic Peninsula Argentina Hope Bay ENVELOPE(-57.038,-57.038,-63.403,-63.403) The Antarctic Polar Biology 44 5 941 957
institution Open Polar
collection Digital.CSIC (Spanish National Research Council)
op_collection_id ftcsic
language English
topic Chrysophyceae
Antarctic lakes
Clone libraries
18S Illumina HiSeq
Molecular and functional diversity
spellingShingle Chrysophyceae
Antarctic lakes
Clone libraries
18S Illumina HiSeq
Molecular and functional diversity
Izaguirre, Irina
Unrein, Fernando
Schiaffino, M. Romina
Lara, Enrique
Singer, David
Balagué, Vanessa
Gasol, Josep M.
Massana, Ramon
Phylogenetic diversity and dominant ecological traits of freshwater Antarctic Chrysophyceae
topic_facet Chrysophyceae
Antarctic lakes
Clone libraries
18S Illumina HiSeq
Molecular and functional diversity
description 17 pages, 6 figures, 3 tables, supplementary information https://doi.org/10.1007/s00300-021-02850-3 Previous studies conducted in summer in the lakes at Hope Bay (Antarctic Peninsula) between 1991 and 2007 showed a large numerical contribution of flagellated Chrysophyceae to the phytoplankton communities, particularly in the oligotrophic lakes, as evidenced by light microscopy observations and molecular fingerprinting. Given the ecological relevance of this group in these Antarctic microbial foodwebs, we carried out further molecular analyses (clone libraries and 18S Illumina high throughput sequencing) to characterize their phylogenetic diversity. The results of this study significantly increased the retrieved Chrysophyceae biodiversity. Clone libraries in two selected lakes (one oligotrophic and one mesotrophic) yielded 12 different chrysophycean OTUs, whereas 81 Swarm OTUs were recovered from six lakes using Illumina HiSeq. With the combination of both methods, we observed sequences of all the chrysophyte known clades, although most of the diversity belonged to Clade D, a group comprising mixotrophic and heterotrophic species. The percentage of reads for this clade in Illumina HiSeq ranged from 30% to 96% of the total Chrysophyceae reads. Based on experiments and observations, we also describe the main ecological traits of this group: the dominant taxa were small pigmented flagellates, well adapted to survive in oligotrophic systems, sometimes abundant under ice-cover subjected to low light intensities, and that have phagotrophic behavior. The used combination of methods allowed us to characterize the biodiversity and ecology of the Chrysophyceae, the dominant phytoplankton group in the oligotrophic lakes of this Maritime Antarctic region The Antarctic expeditions were supported by the Dirección Nacional del Antártico (DNA) of Argentina, within the framework of a cooperative project between this institution, University of Buenos Aires and the Institut de Ciències del Mar (ICM)-CSIC. The investigations ...
author2 Dirección Nacional del Antártico (Argentina)
Universidad de Buenos Aires
CSIC - Instituto de Ciencias del Mar (ICM)
Consejo Nacional de Investigaciones Científicas y Técnicas (Argentina)
Ministerio de Educación, Cultura y Deporte (España)
Comunidad de Madrid
Swiss National Science Foundation
Agencia Estatal de Investigación (España)
format Article in Journal/Newspaper
author Izaguirre, Irina
Unrein, Fernando
Schiaffino, M. Romina
Lara, Enrique
Singer, David
Balagué, Vanessa
Gasol, Josep M.
Massana, Ramon
author_facet Izaguirre, Irina
Unrein, Fernando
Schiaffino, M. Romina
Lara, Enrique
Singer, David
Balagué, Vanessa
Gasol, Josep M.
Massana, Ramon
author_sort Izaguirre, Irina
title Phylogenetic diversity and dominant ecological traits of freshwater Antarctic Chrysophyceae
title_short Phylogenetic diversity and dominant ecological traits of freshwater Antarctic Chrysophyceae
title_full Phylogenetic diversity and dominant ecological traits of freshwater Antarctic Chrysophyceae
title_fullStr Phylogenetic diversity and dominant ecological traits of freshwater Antarctic Chrysophyceae
title_full_unstemmed Phylogenetic diversity and dominant ecological traits of freshwater Antarctic Chrysophyceae
title_sort phylogenetic diversity and dominant ecological traits of freshwater antarctic chrysophyceae
publisher Springer
publishDate 2021
url http://hdl.handle.net/10261/242257
https://doi.org/10.1007/s00300-021-02850-3
https://doi.org/10.13039/501100005363
https://doi.org/10.13039/501100003176
https://doi.org/10.13039/501100002923
https://doi.org/10.13039/100012818
https://doi.org/10.13039/501100011033
long_lat ENVELOPE(-57.038,-57.038,-63.403,-63.403)
geographic Antarctic
Antarctic Peninsula
Argentina
Hope Bay
The Antarctic
geographic_facet Antarctic
Antarctic Peninsula
Argentina
Hope Bay
The Antarctic
genre Antarc*
Antarctic
Antarctic Peninsula
Dirección Nacional del Antártico
Polar Biology
genre_facet Antarc*
Antarctic
Antarctic Peninsula
Dirección Nacional del Antártico
Polar Biology
op_relation Postprint
https://doi.org/10.1007/s00300-021-02850-3

Polar Biology 44: 941-957 (2021)
0722-4060
CEX2019-000928-S
http://hdl.handle.net/10261/242257
doi:10.1007/s00300-021-02850-3
1432-2056
http://dx.doi.org/10.13039/501100005363
http://dx.doi.org/10.13039/501100003176
http://dx.doi.org/10.13039/501100002923
http://dx.doi.org/10.13039/100012818
http://dx.doi.org/10.13039/501100011033
op_rights open
op_doi https://doi.org/10.1007/s00300-021-02850-310.13039/50110000536310.13039/50110000317610.13039/50110000292310.13039/10001281810.13039/501100011033
container_title Polar Biology
container_volume 44
container_issue 5
container_start_page 941
op_container_end_page 957
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