Phylogenetic diversity and dominant ecological traits of freshwater Antarctic Chrysophyceae
17 pages, 6 figures, 3 tables, supplementary information https://doi.org/10.1007/s00300-021-02850-3 Previous studies conducted in summer in the lakes at Hope Bay (Antarctic Peninsula) between 1991 and 2007 showed a large numerical contribution of flagellated Chrysophyceae to the phytoplankton commun...
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Online Access: | http://hdl.handle.net/10261/242257 https://doi.org/10.1007/s00300-021-02850-3 https://doi.org/10.13039/501100005363 https://doi.org/10.13039/501100003176 https://doi.org/10.13039/501100002923 https://doi.org/10.13039/100012818 https://doi.org/10.13039/501100011033 |
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ftcsic:oai:digital.csic.es:10261/242257 2024-02-11T09:58:31+01:00 Phylogenetic diversity and dominant ecological traits of freshwater Antarctic Chrysophyceae Izaguirre, Irina Unrein, Fernando Schiaffino, M. Romina Lara, Enrique Singer, David Balagué, Vanessa Gasol, Josep M. Massana, Ramon Dirección Nacional del Antártico (Argentina) Universidad de Buenos Aires CSIC - Instituto de Ciencias del Mar (ICM) Consejo Nacional de Investigaciones Científicas y Técnicas (Argentina) Ministerio de Educación, Cultura y Deporte (España) Comunidad de Madrid Swiss National Science Foundation Agencia Estatal de Investigación (España) 2021-04 http://hdl.handle.net/10261/242257 https://doi.org/10.1007/s00300-021-02850-3 https://doi.org/10.13039/501100005363 https://doi.org/10.13039/501100003176 https://doi.org/10.13039/501100002923 https://doi.org/10.13039/100012818 https://doi.org/10.13039/501100011033 en eng Springer Postprint https://doi.org/10.1007/s00300-021-02850-3 Sí Polar Biology 44: 941-957 (2021) 0722-4060 CEX2019-000928-S http://hdl.handle.net/10261/242257 doi:10.1007/s00300-021-02850-3 1432-2056 http://dx.doi.org/10.13039/501100005363 http://dx.doi.org/10.13039/501100003176 http://dx.doi.org/10.13039/501100002923 http://dx.doi.org/10.13039/100012818 http://dx.doi.org/10.13039/501100011033 open Chrysophyceae Antarctic lakes Clone libraries 18S Illumina HiSeq Molecular and functional diversity artículo http://purl.org/coar/resource_type/c_6501 2021 ftcsic https://doi.org/10.1007/s00300-021-02850-310.13039/50110000536310.13039/50110000317610.13039/50110000292310.13039/10001281810.13039/501100011033 2024-01-16T11:09:18Z 17 pages, 6 figures, 3 tables, supplementary information https://doi.org/10.1007/s00300-021-02850-3 Previous studies conducted in summer in the lakes at Hope Bay (Antarctic Peninsula) between 1991 and 2007 showed a large numerical contribution of flagellated Chrysophyceae to the phytoplankton communities, particularly in the oligotrophic lakes, as evidenced by light microscopy observations and molecular fingerprinting. Given the ecological relevance of this group in these Antarctic microbial foodwebs, we carried out further molecular analyses (clone libraries and 18S Illumina high throughput sequencing) to characterize their phylogenetic diversity. The results of this study significantly increased the retrieved Chrysophyceae biodiversity. Clone libraries in two selected lakes (one oligotrophic and one mesotrophic) yielded 12 different chrysophycean OTUs, whereas 81 Swarm OTUs were recovered from six lakes using Illumina HiSeq. With the combination of both methods, we observed sequences of all the chrysophyte known clades, although most of the diversity belonged to Clade D, a group comprising mixotrophic and heterotrophic species. The percentage of reads for this clade in Illumina HiSeq ranged from 30% to 96% of the total Chrysophyceae reads. Based on experiments and observations, we also describe the main ecological traits of this group: the dominant taxa were small pigmented flagellates, well adapted to survive in oligotrophic systems, sometimes abundant under ice-cover subjected to low light intensities, and that have phagotrophic behavior. The used combination of methods allowed us to characterize the biodiversity and ecology of the Chrysophyceae, the dominant phytoplankton group in the oligotrophic lakes of this Maritime Antarctic region The Antarctic expeditions were supported by the Dirección Nacional del Antártico (DNA) of Argentina, within the framework of a cooperative project between this institution, University of Buenos Aires and the Institut de Ciències del Mar (ICM)-CSIC. The investigations ... Article in Journal/Newspaper Antarc* Antarctic Antarctic Peninsula Dirección Nacional del Antártico Polar Biology Digital.CSIC (Spanish National Research Council) Antarctic Antarctic Peninsula Argentina Hope Bay ENVELOPE(-57.038,-57.038,-63.403,-63.403) The Antarctic Polar Biology 44 5 941 957 |
institution |
Open Polar |
collection |
Digital.CSIC (Spanish National Research Council) |
op_collection_id |
ftcsic |
language |
English |
topic |
Chrysophyceae Antarctic lakes Clone libraries 18S Illumina HiSeq Molecular and functional diversity |
spellingShingle |
Chrysophyceae Antarctic lakes Clone libraries 18S Illumina HiSeq Molecular and functional diversity Izaguirre, Irina Unrein, Fernando Schiaffino, M. Romina Lara, Enrique Singer, David Balagué, Vanessa Gasol, Josep M. Massana, Ramon Phylogenetic diversity and dominant ecological traits of freshwater Antarctic Chrysophyceae |
topic_facet |
Chrysophyceae Antarctic lakes Clone libraries 18S Illumina HiSeq Molecular and functional diversity |
description |
17 pages, 6 figures, 3 tables, supplementary information https://doi.org/10.1007/s00300-021-02850-3 Previous studies conducted in summer in the lakes at Hope Bay (Antarctic Peninsula) between 1991 and 2007 showed a large numerical contribution of flagellated Chrysophyceae to the phytoplankton communities, particularly in the oligotrophic lakes, as evidenced by light microscopy observations and molecular fingerprinting. Given the ecological relevance of this group in these Antarctic microbial foodwebs, we carried out further molecular analyses (clone libraries and 18S Illumina high throughput sequencing) to characterize their phylogenetic diversity. The results of this study significantly increased the retrieved Chrysophyceae biodiversity. Clone libraries in two selected lakes (one oligotrophic and one mesotrophic) yielded 12 different chrysophycean OTUs, whereas 81 Swarm OTUs were recovered from six lakes using Illumina HiSeq. With the combination of both methods, we observed sequences of all the chrysophyte known clades, although most of the diversity belonged to Clade D, a group comprising mixotrophic and heterotrophic species. The percentage of reads for this clade in Illumina HiSeq ranged from 30% to 96% of the total Chrysophyceae reads. Based on experiments and observations, we also describe the main ecological traits of this group: the dominant taxa were small pigmented flagellates, well adapted to survive in oligotrophic systems, sometimes abundant under ice-cover subjected to low light intensities, and that have phagotrophic behavior. The used combination of methods allowed us to characterize the biodiversity and ecology of the Chrysophyceae, the dominant phytoplankton group in the oligotrophic lakes of this Maritime Antarctic region The Antarctic expeditions were supported by the Dirección Nacional del Antártico (DNA) of Argentina, within the framework of a cooperative project between this institution, University of Buenos Aires and the Institut de Ciències del Mar (ICM)-CSIC. The investigations ... |
author2 |
Dirección Nacional del Antártico (Argentina) Universidad de Buenos Aires CSIC - Instituto de Ciencias del Mar (ICM) Consejo Nacional de Investigaciones Científicas y Técnicas (Argentina) Ministerio de Educación, Cultura y Deporte (España) Comunidad de Madrid Swiss National Science Foundation Agencia Estatal de Investigación (España) |
format |
Article in Journal/Newspaper |
author |
Izaguirre, Irina Unrein, Fernando Schiaffino, M. Romina Lara, Enrique Singer, David Balagué, Vanessa Gasol, Josep M. Massana, Ramon |
author_facet |
Izaguirre, Irina Unrein, Fernando Schiaffino, M. Romina Lara, Enrique Singer, David Balagué, Vanessa Gasol, Josep M. Massana, Ramon |
author_sort |
Izaguirre, Irina |
title |
Phylogenetic diversity and dominant ecological traits of freshwater Antarctic Chrysophyceae |
title_short |
Phylogenetic diversity and dominant ecological traits of freshwater Antarctic Chrysophyceae |
title_full |
Phylogenetic diversity and dominant ecological traits of freshwater Antarctic Chrysophyceae |
title_fullStr |
Phylogenetic diversity and dominant ecological traits of freshwater Antarctic Chrysophyceae |
title_full_unstemmed |
Phylogenetic diversity and dominant ecological traits of freshwater Antarctic Chrysophyceae |
title_sort |
phylogenetic diversity and dominant ecological traits of freshwater antarctic chrysophyceae |
publisher |
Springer |
publishDate |
2021 |
url |
http://hdl.handle.net/10261/242257 https://doi.org/10.1007/s00300-021-02850-3 https://doi.org/10.13039/501100005363 https://doi.org/10.13039/501100003176 https://doi.org/10.13039/501100002923 https://doi.org/10.13039/100012818 https://doi.org/10.13039/501100011033 |
long_lat |
ENVELOPE(-57.038,-57.038,-63.403,-63.403) |
geographic |
Antarctic Antarctic Peninsula Argentina Hope Bay The Antarctic |
geographic_facet |
Antarctic Antarctic Peninsula Argentina Hope Bay The Antarctic |
genre |
Antarc* Antarctic Antarctic Peninsula Dirección Nacional del Antártico Polar Biology |
genre_facet |
Antarc* Antarctic Antarctic Peninsula Dirección Nacional del Antártico Polar Biology |
op_relation |
Postprint https://doi.org/10.1007/s00300-021-02850-3 Sí Polar Biology 44: 941-957 (2021) 0722-4060 CEX2019-000928-S http://hdl.handle.net/10261/242257 doi:10.1007/s00300-021-02850-3 1432-2056 http://dx.doi.org/10.13039/501100005363 http://dx.doi.org/10.13039/501100003176 http://dx.doi.org/10.13039/501100002923 http://dx.doi.org/10.13039/100012818 http://dx.doi.org/10.13039/501100011033 |
op_rights |
open |
op_doi |
https://doi.org/10.1007/s00300-021-02850-310.13039/50110000536310.13039/50110000317610.13039/50110000292310.13039/10001281810.13039/501100011033 |
container_title |
Polar Biology |
container_volume |
44 |
container_issue |
5 |
container_start_page |
941 |
op_container_end_page |
957 |
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1790594174847811584 |