NAO: a code for reconstructing North Atlantic Oscillation from XRF data

Más información: https://github.com/andrewcparnell/NAO Contacto: Andrew Parnell, andrew.parnell@mu.ie R code for a Bayesian model for reconstructing North Atlantic Oscillation from X-Ray Fluorescence (XRF) data. This code follows a Bayesian modelling approach to produce a reconstruction of the NAO’s...

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Main Authors: Parnell, Andrew, Cahill, Niamh, Sánchez-López, Guiomar, Hernández, Armand, Giralt, Santiago
Other Authors: Ministerio de Economía y Competitividad (España), Consejo Superior de Investigaciones Científicas (España), Generalitat de Catalunya, European Commission, Ministério da Educação e Ciência (Portugal), Science Foundation Ireland
Format: Software
Language:English
Published: 2018
Subjects:
Online Access:http://hdl.handle.net/10261/239385
https://doi.org/10.20350/digitalCSIC/13848
https://doi.org/10.13039/501100003381
https://doi.org/10.13039/501100001602
https://doi.org/10.13039/501100003339
https://doi.org/10.13039/501100000780
https://doi.org/10.13039/501100002809
https://doi.org/10.13039/501100003329
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description Más información: https://github.com/andrewcparnell/NAO Contacto: Andrew Parnell, andrew.parnell@mu.ie R code for a Bayesian model for reconstructing North Atlantic Oscillation from X-Ray Fluorescence (XRF) data. This code follows a Bayesian modelling approach to produce a reconstruction of the NAO’s impact on the central Iberian Peninsula. The relationship between proxy and climate is derived from a training data set for the instrumental/proxy calibration period and is expressed through a likelihood function. This function is combined with a prior probability density function containing parameter information in order to obtain a posterior probability distribution of the reconstructed NAO values using Bayes’ theorem. Whilst Parnell et al. (2015) based their framework on reconstructing multivariate temperature and moisture measurements from raw pollen data, this method is easily adaptable to other proxies and climate variables. Indeed, Cahill et al. (2016) used a similar approach to reconstruct sea level from foraminifera. In all cases the measurements/counts of the proxy are required for a set of sediment layers (depths) in a core. Spanish Ministry of Economy and Competitiveness, CGL2010-15767/BTE PaleoNAO; Spanish Ministry of Economy and Competitiveness, CGL2013-40608-R; RapidNAO; Spanish Ministry of Economy and Competitiveness ,CGL2016-75281-C2-1-R PaleoModes; PhD JAE grant BOE 03/02/2011; Generalitat de Catalunya y European Union Horizon 2020 2016 BP 00023 Beatriu de Pinós – Marie Curie Cofund programme fellowship; Portuguese FCT project PTDC/CTA-GEO/29029/2017 HOLMODRIVE—North Atlantic Atmospheric Patterns Influence on Western Iberia Climate: From the Late Glacial to the Present; Science Foundation Ireland Career Development Award 17/CDA/4695; Science Foundation Ireland 12/RC/2289_P2 Peer reviewed
author2 Ministerio de Economía y Competitividad (España)
Consejo Superior de Investigaciones Científicas (España)
Generalitat de Catalunya
European Commission
Ministério da Educação e Ciência (Portugal)
Science Foundation Ireland
Parnell, Andrew
Cahill, Niamh
Hernández, Armand
Giralt, Santiago
format Software
author Parnell, Andrew
Cahill, Niamh
Sánchez-López, Guiomar
Hernández, Armand
Giralt, Santiago
spellingShingle Parnell, Andrew
Cahill, Niamh
Sánchez-López, Guiomar
Hernández, Armand
Giralt, Santiago
NAO: a code for reconstructing North Atlantic Oscillation from XRF data
author_facet Parnell, Andrew
Cahill, Niamh
Sánchez-López, Guiomar
Hernández, Armand
Giralt, Santiago
author_sort Parnell, Andrew
title NAO: a code for reconstructing North Atlantic Oscillation from XRF data
title_short NAO: a code for reconstructing North Atlantic Oscillation from XRF data
title_full NAO: a code for reconstructing North Atlantic Oscillation from XRF data
title_fullStr NAO: a code for reconstructing North Atlantic Oscillation from XRF data
title_full_unstemmed NAO: a code for reconstructing North Atlantic Oscillation from XRF data
title_sort nao: a code for reconstructing north atlantic oscillation from xrf data
publishDate 2018
url http://hdl.handle.net/10261/239385
https://doi.org/10.20350/digitalCSIC/13848
https://doi.org/10.13039/501100003381
https://doi.org/10.13039/501100001602
https://doi.org/10.13039/501100003339
https://doi.org/10.13039/501100000780
https://doi.org/10.13039/501100002809
https://doi.org/10.13039/501100003329
long_lat ENVELOPE(-71.231,-71.231,-74.880,-74.880)
geographic Cahill
geographic_facet Cahill
genre North Atlantic
North Atlantic oscillation
genre_facet North Atlantic
North Atlantic oscillation
op_relation #PLACEHOLDER_PARENT_METADATA_VALUE#
info:eu-repo/grantAgreement/MINECO/Plan Estatal de Investigación Científica y Técnica y de Innovación 2013-2016/CGL2013-40608-R
info:eu-repo/grantAgreement/MINECO/Plan Estatal de Investigación Científica y Técnica y de Innovación 2013-2016/CGL2016-75281-C2-1-R
Hernández, A., Sánchez-López, G., Pla-Rabes, S., Comas-Bru, L., Parnell, A., Cahill, N., Geyer, A., Trigo, R. M. and Giralt, S. (2020). A 2,000-year Bayesian NAO reconstruction from the Iberian Peninsula, Sci. Rep., 10(1), 14961. http://doi.org/10.1038/s41598-020-71372-5
Cahill, N., Kemp, A. C., Horton, B. P. & Parnell, A. C. (2016). A Bayesian hierarchical model for reconstructing relative sea level: from raw data to rates of change. Clim. Past 12, 525–542.
Parnell, A.C., Sweeney, J., Doan, T.K., Salter‐Townshend, M., Allen, J.R.M., Huntley, B. and Haslett, J. (2015). Bayesian inference for palaeoclimate with time uncertainty and stochastic volatility. J. R. Stat. Soc. C, 64: 115-138. http://doi.org/10.1111/rssc.12065

Parnell, A., Cahill, N., Sánchez‐López, G., Hernández, A. & Giralt, S. (2018). NAO: a code for reconstructing North Atlantic Oscillation from XRF data; DIGITAL.CSIC; http://dx.doi.org/10.20350/digitalCSIC/13848
http://hdl.handle.net/10261/239385
doi:10.20350/digitalCSIC/13848
http://dx.doi.org/10.13039/501100003381
http://dx.doi.org/10.13039/501100001602
http://dx.doi.org/10.13039/501100003339
http://dx.doi.org/10.13039/501100000780
http://dx.doi.org/10.13039/501100002809
http://dx.doi.org/10.13039/501100003329
op_rights open
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spelling ftcsic:oai:digital.csic.es:10261/239385 2024-02-11T10:06:12+01:00 NAO: a code for reconstructing North Atlantic Oscillation from XRF data Parnell, Andrew Cahill, Niamh Sánchez-López, Guiomar Hernández, Armand Giralt, Santiago Ministerio de Economía y Competitividad (España) Consejo Superior de Investigaciones Científicas (España) Generalitat de Catalunya European Commission Ministério da Educação e Ciência (Portugal) Science Foundation Ireland Parnell, Andrew Cahill, Niamh Hernández, Armand Giralt, Santiago 2018 R programming language http://hdl.handle.net/10261/239385 https://doi.org/10.20350/digitalCSIC/13848 https://doi.org/10.13039/501100003381 https://doi.org/10.13039/501100001602 https://doi.org/10.13039/501100003339 https://doi.org/10.13039/501100000780 https://doi.org/10.13039/501100002809 https://doi.org/10.13039/501100003329 en eng #PLACEHOLDER_PARENT_METADATA_VALUE# info:eu-repo/grantAgreement/MINECO/Plan Estatal de Investigación Científica y Técnica y de Innovación 2013-2016/CGL2013-40608-R info:eu-repo/grantAgreement/MINECO/Plan Estatal de Investigación Científica y Técnica y de Innovación 2013-2016/CGL2016-75281-C2-1-R Hernández, A., Sánchez-López, G., Pla-Rabes, S., Comas-Bru, L., Parnell, A., Cahill, N., Geyer, A., Trigo, R. M. and Giralt, S. (2020). A 2,000-year Bayesian NAO reconstruction from the Iberian Peninsula, Sci. Rep., 10(1), 14961. http://doi.org/10.1038/s41598-020-71372-5 Cahill, N., Kemp, A. C., Horton, B. P. & Parnell, A. C. (2016). A Bayesian hierarchical model for reconstructing relative sea level: from raw data to rates of change. Clim. Past 12, 525–542. Parnell, A.C., Sweeney, J., Doan, T.K., Salter‐Townshend, M., Allen, J.R.M., Huntley, B. and Haslett, J. (2015). Bayesian inference for palaeoclimate with time uncertainty and stochastic volatility. J. R. Stat. Soc. C, 64: 115-138. http://doi.org/10.1111/rssc.12065 Sí Parnell, A., Cahill, N., Sánchez‐López, G., Hernández, A. & Giralt, S. (2018). NAO: a code for reconstructing North Atlantic Oscillation from XRF data; DIGITAL.CSIC; http://dx.doi.org/10.20350/digitalCSIC/13848 http://hdl.handle.net/10261/239385 doi:10.20350/digitalCSIC/13848 http://dx.doi.org/10.13039/501100003381 http://dx.doi.org/10.13039/501100001602 http://dx.doi.org/10.13039/501100003339 http://dx.doi.org/10.13039/501100000780 http://dx.doi.org/10.13039/501100002809 http://dx.doi.org/10.13039/501100003329 open software http://purl.org/coar/resource_type/c_5ce6 2018 ftcsic https://doi.org/10.20350/digitalCSIC/1384810.13039/50110000338110.13039/50110000160210.13039/50110000333910.13039/50110000078010.13039/50110000280910.13039/50110000332910.1038/s41598-020-71372-510.1111/rssc.12065 2024-01-16T11:07:54Z Más información: https://github.com/andrewcparnell/NAO Contacto: Andrew Parnell, andrew.parnell@mu.ie R code for a Bayesian model for reconstructing North Atlantic Oscillation from X-Ray Fluorescence (XRF) data. This code follows a Bayesian modelling approach to produce a reconstruction of the NAO’s impact on the central Iberian Peninsula. The relationship between proxy and climate is derived from a training data set for the instrumental/proxy calibration period and is expressed through a likelihood function. This function is combined with a prior probability density function containing parameter information in order to obtain a posterior probability distribution of the reconstructed NAO values using Bayes’ theorem. Whilst Parnell et al. (2015) based their framework on reconstructing multivariate temperature and moisture measurements from raw pollen data, this method is easily adaptable to other proxies and climate variables. Indeed, Cahill et al. (2016) used a similar approach to reconstruct sea level from foraminifera. In all cases the measurements/counts of the proxy are required for a set of sediment layers (depths) in a core. Spanish Ministry of Economy and Competitiveness, CGL2010-15767/BTE PaleoNAO; Spanish Ministry of Economy and Competitiveness, CGL2013-40608-R; RapidNAO; Spanish Ministry of Economy and Competitiveness ,CGL2016-75281-C2-1-R PaleoModes; PhD JAE grant BOE 03/02/2011; Generalitat de Catalunya y European Union Horizon 2020 2016 BP 00023 Beatriu de Pinós – Marie Curie Cofund programme fellowship; Portuguese FCT project PTDC/CTA-GEO/29029/2017 HOLMODRIVE—North Atlantic Atmospheric Patterns Influence on Western Iberia Climate: From the Late Glacial to the Present; Science Foundation Ireland Career Development Award 17/CDA/4695; Science Foundation Ireland 12/RC/2289_P2 Peer reviewed Software North Atlantic North Atlantic oscillation Digital.CSIC (Spanish National Research Council) Cahill ENVELOPE(-71.231,-71.231,-74.880,-74.880)