Revealing Keystone Arctic microbial genomes
IX Simposio de Estudios Polares del Comité Español del Scientific Committee on Antarctic Research (SCAR), 5-7 September 2018, Madrid, España.-- 1 page Microbial community composition in the North Polar waters varies greatly throughout the year. From what it is known so far, spring melting of the ice...
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Scientific Committee on Antarctic Research
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ftcsic:oai:digital.csic.es:10261/193261 2024-02-11T09:56:58+01:00 Revealing Keystone Arctic microbial genomes Royo-Llonch, Marta Sánchez, Pablo Pedrós-Alió, Carlos Tara Oceans Consortium Acinas, Silvia G. 2018-09-05 http://hdl.handle.net/10261/193261 unknown Scientific Committee on Antarctic Research Sí isbn: 978-84-8344-670-6 IX Simposio de Estudios Polares : Libro de Résumenes : Abstract volume: 122 (2018) http://hdl.handle.net/10261/193261 none Arctic Microbial genomes Metagenomics MAGs Tara Oceans comunicación de congreso http://purl.org/coar/resource_type/c_5794 2018 ftcsic 2024-01-16T10:44:55Z IX Simposio de Estudios Polares del Comité Español del Scientific Committee on Antarctic Research (SCAR), 5-7 September 2018, Madrid, España.-- 1 page Microbial community composition in the North Polar waters varies greatly throughout the year. From what it is known so far, spring melting of the ice and increase in light disposal spur the bloom of phytoplankton. During summer, bacterial populations, mainly heterotrophic and photoheterotrophic, feed on the nutrients derived from such bloom. With fall’s shorter light hours and colder seawater temperatures, the bacterial community shifts towards chemolithoautotrophic microorganisms, that will prevail during winter. In 2013 Tara Oceans navigated Arctic waters during spring, summer and the beginning of fall (May to October), extensively sampling the microbial plankton communities. Here, we show the reconstruction of 2555 bacterial and archaeal metagenomic assembled genomes (MAGs) from 41 microbial metagenomes, covering the whole Arctic Ocean from spring to early fall at different water depths. Together with the physicochemical information of all stations we are capable of linking habitat preferences (generalistsvs specialist) of the different prokaryotic taxa around the North Pole with seasonality and the phenology of phytoplankton blooms at the maximum resolution possible, the genome level. Of the reconstructed prokaryotic MAGs, 96 are considered to be high-quality draft-like genomes (>90% genome completeness, <5% contamination), comprising keystone genomes and several potential new phyla, including unexpected taxa such as Dehaloccocoidetes, a group that had never been described in polar oceans waters. Analyses of the functional capacity of prokaryotic MAGs across their phylogeny allows disentangling the prevalence of convergent versus divergent evolution processes in prokaryotic species. Moreover, the metabolic capacity of these uncultured prokaryotic genomes reveals the ubiquity of chemolithoautotrophic metabolisms in this environment through the different ... Conference Object Antarc* Antarctic Arctic Arctic Ocean North Pole Phytoplankton SCAR Scientific Committee on Antarctic Research Digital.CSIC (Spanish National Research Council) Arctic Antarctic Arctic Ocean North Pole |
institution |
Open Polar |
collection |
Digital.CSIC (Spanish National Research Council) |
op_collection_id |
ftcsic |
language |
unknown |
topic |
Arctic Microbial genomes Metagenomics MAGs Tara Oceans |
spellingShingle |
Arctic Microbial genomes Metagenomics MAGs Tara Oceans Royo-Llonch, Marta Sánchez, Pablo Pedrós-Alió, Carlos Tara Oceans Consortium Acinas, Silvia G. Revealing Keystone Arctic microbial genomes |
topic_facet |
Arctic Microbial genomes Metagenomics MAGs Tara Oceans |
description |
IX Simposio de Estudios Polares del Comité Español del Scientific Committee on Antarctic Research (SCAR), 5-7 September 2018, Madrid, España.-- 1 page Microbial community composition in the North Polar waters varies greatly throughout the year. From what it is known so far, spring melting of the ice and increase in light disposal spur the bloom of phytoplankton. During summer, bacterial populations, mainly heterotrophic and photoheterotrophic, feed on the nutrients derived from such bloom. With fall’s shorter light hours and colder seawater temperatures, the bacterial community shifts towards chemolithoautotrophic microorganisms, that will prevail during winter. In 2013 Tara Oceans navigated Arctic waters during spring, summer and the beginning of fall (May to October), extensively sampling the microbial plankton communities. Here, we show the reconstruction of 2555 bacterial and archaeal metagenomic assembled genomes (MAGs) from 41 microbial metagenomes, covering the whole Arctic Ocean from spring to early fall at different water depths. Together with the physicochemical information of all stations we are capable of linking habitat preferences (generalistsvs specialist) of the different prokaryotic taxa around the North Pole with seasonality and the phenology of phytoplankton blooms at the maximum resolution possible, the genome level. Of the reconstructed prokaryotic MAGs, 96 are considered to be high-quality draft-like genomes (>90% genome completeness, <5% contamination), comprising keystone genomes and several potential new phyla, including unexpected taxa such as Dehaloccocoidetes, a group that had never been described in polar oceans waters. Analyses of the functional capacity of prokaryotic MAGs across their phylogeny allows disentangling the prevalence of convergent versus divergent evolution processes in prokaryotic species. Moreover, the metabolic capacity of these uncultured prokaryotic genomes reveals the ubiquity of chemolithoautotrophic metabolisms in this environment through the different ... |
format |
Conference Object |
author |
Royo-Llonch, Marta Sánchez, Pablo Pedrós-Alió, Carlos Tara Oceans Consortium Acinas, Silvia G. |
author_facet |
Royo-Llonch, Marta Sánchez, Pablo Pedrós-Alió, Carlos Tara Oceans Consortium Acinas, Silvia G. |
author_sort |
Royo-Llonch, Marta |
title |
Revealing Keystone Arctic microbial genomes |
title_short |
Revealing Keystone Arctic microbial genomes |
title_full |
Revealing Keystone Arctic microbial genomes |
title_fullStr |
Revealing Keystone Arctic microbial genomes |
title_full_unstemmed |
Revealing Keystone Arctic microbial genomes |
title_sort |
revealing keystone arctic microbial genomes |
publisher |
Scientific Committee on Antarctic Research |
publishDate |
2018 |
url |
http://hdl.handle.net/10261/193261 |
geographic |
Arctic Antarctic Arctic Ocean North Pole |
geographic_facet |
Arctic Antarctic Arctic Ocean North Pole |
genre |
Antarc* Antarctic Arctic Arctic Ocean North Pole Phytoplankton SCAR Scientific Committee on Antarctic Research |
genre_facet |
Antarc* Antarctic Arctic Arctic Ocean North Pole Phytoplankton SCAR Scientific Committee on Antarctic Research |
op_relation |
Sí isbn: 978-84-8344-670-6 IX Simposio de Estudios Polares : Libro de Résumenes : Abstract volume: 122 (2018) http://hdl.handle.net/10261/193261 |
op_rights |
none |
_version_ |
1790607441816190976 |