Nanoplankton assemblages in maritime Antarctic lakes: characterisation and molecular fingerprinting comparison

14 pages, 3 figures, 4 tables The composition of planktonic eukaryotes in the size fraction 3-20 μm of 10 maritime Antarctic lakes was studied by denaturing gradient gel electrophoresis (DGGE). Microscopic observations were also carried out to compare the results obtained by this molecular fingerpri...

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Published in:Aquatic Microbial Ecology
Main Authors: Unrein, Fernando, Izaguirre, Irina, Massana, Ramon, Balagué, Vanessa, Gasol, Josep M.
Format: Article in Journal/Newspaper
Language:unknown
Published: Inter Research 2005
Subjects:
Online Access:http://hdl.handle.net/10261/133661
https://doi.org/10.3354/ame040269
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author Unrein, Fernando
Izaguirre, Irina
Massana, Ramon
Balagué, Vanessa
Gasol, Josep M.
author_facet Unrein, Fernando
Izaguirre, Irina
Massana, Ramon
Balagué, Vanessa
Gasol, Josep M.
author_sort Unrein, Fernando
collection Digital.CSIC (Spanish National Research Council)
container_start_page 269
container_title Aquatic Microbial Ecology
container_volume 40
description 14 pages, 3 figures, 4 tables The composition of planktonic eukaryotes in the size fraction 3-20 μm of 10 maritime Antarctic lakes was studied by denaturing gradient gel electrophoresis (DGGE). Microscopic observations were also carried out to compare the results obtained by this molecular fingerprinting technique with morphological data. Six lakes from Hope Bay (Antarctic Peninsula) and 4 from the Potter Peninsula (King George Island) were sampled during the austral summer of 2003. These lakes were of different trophic status and covered a wide range of limnological features. Previous studies of the planktonic communities of these lakes revealed high nanoflagellate abundance and biomass, but their taxonomic identification was usually uncertain due to their similarity in size and shape. Here, the application of DGGE allowed both a comparison of the structure of the nanoplanktonic communities and an identification of the dominant populations through sequencing of the most prominent DGGE bands. The most important organisms in these lakes were the Chrysophyceae, represented in the DGGE gel by 5 different band positions and identified by microscopy in 5 different morphotypes, including uniflagellated and biflagellated naked organisms: 1 sequence belonged to the Chrysosphaerales, 2 closely related bands (likely 2 species from the same genus) belonged probably to the Ochromonadales (unicellular biflagellates), while the other 2 bands could not be assigned to any defined chrysophyte group. Sequences related to Chlorophyceae, Bacillariophyceae and probably Cercozoa were also retrieved. A Dictyochophyceae belonging to the order Pedinellales is reported for the first time in freshwater Antarctic ecosystems. Microscopic observations suggest that this phytoplanktonic organism most likely corresponds to Pseudopedinella. Most of the lakes shared several common sequences, such as 2 chrysophyte bands, which suggests the existence of well-adapted nanoplanktonic species dispersed throughout the Antarctic lakes. However, some ...
format Article in Journal/Newspaper
genre Antarc*
Antarctic
Antarctic Peninsula
King George Island
genre_facet Antarc*
Antarctic
Antarctic Peninsula
King George Island
geographic Antarctic
The Antarctic
Antarctic Peninsula
Austral
King George Island
Hope Bay
Potter Peninsula
geographic_facet Antarctic
The Antarctic
Antarctic Peninsula
Austral
King George Island
Hope Bay
Potter Peninsula
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institution Open Polar
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doi:10.3354/ame040269
issn: 0948-3055
e-issn: 1616-1564
Aquatic Microbial Ecology 40(3): 269-282 (2005)
http://hdl.handle.net/10261/133661
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publisher Inter Research
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spelling ftcsic:oai:digital.csic.es:10261/133661 2025-01-16T19:36:27+00:00 Nanoplankton assemblages in maritime Antarctic lakes: characterisation and molecular fingerprinting comparison Unrein, Fernando Izaguirre, Irina Massana, Ramon Balagué, Vanessa Gasol, Josep M. 2005-10 http://hdl.handle.net/10261/133661 https://doi.org/10.3354/ame040269 unknown Inter Research https://doi.org/10.3354/ame040269 Sí doi:10.3354/ame040269 issn: 0948-3055 e-issn: 1616-1564 Aquatic Microbial Ecology 40(3): 269-282 (2005) http://hdl.handle.net/10261/133661 open Freshwater nanoplankton Antarctic lakes DGGE 18S rDNA artículo http://purl.org/coar/resource_type/c_6501 2005 ftcsic https://doi.org/10.3354/ame040269 2024-01-16T10:15:57Z 14 pages, 3 figures, 4 tables The composition of planktonic eukaryotes in the size fraction 3-20 μm of 10 maritime Antarctic lakes was studied by denaturing gradient gel electrophoresis (DGGE). Microscopic observations were also carried out to compare the results obtained by this molecular fingerprinting technique with morphological data. Six lakes from Hope Bay (Antarctic Peninsula) and 4 from the Potter Peninsula (King George Island) were sampled during the austral summer of 2003. These lakes were of different trophic status and covered a wide range of limnological features. Previous studies of the planktonic communities of these lakes revealed high nanoflagellate abundance and biomass, but their taxonomic identification was usually uncertain due to their similarity in size and shape. Here, the application of DGGE allowed both a comparison of the structure of the nanoplanktonic communities and an identification of the dominant populations through sequencing of the most prominent DGGE bands. The most important organisms in these lakes were the Chrysophyceae, represented in the DGGE gel by 5 different band positions and identified by microscopy in 5 different morphotypes, including uniflagellated and biflagellated naked organisms: 1 sequence belonged to the Chrysosphaerales, 2 closely related bands (likely 2 species from the same genus) belonged probably to the Ochromonadales (unicellular biflagellates), while the other 2 bands could not be assigned to any defined chrysophyte group. Sequences related to Chlorophyceae, Bacillariophyceae and probably Cercozoa were also retrieved. A Dictyochophyceae belonging to the order Pedinellales is reported for the first time in freshwater Antarctic ecosystems. Microscopic observations suggest that this phytoplanktonic organism most likely corresponds to Pseudopedinella. Most of the lakes shared several common sequences, such as 2 chrysophyte bands, which suggests the existence of well-adapted nanoplanktonic species dispersed throughout the Antarctic lakes. However, some ... Article in Journal/Newspaper Antarc* Antarctic Antarctic Peninsula King George Island Digital.CSIC (Spanish National Research Council) Antarctic The Antarctic Antarctic Peninsula Austral King George Island Hope Bay ENVELOPE(-57.038,-57.038,-63.403,-63.403) Potter Peninsula ENVELOPE(-58.658,-58.658,-62.246,-62.246) Aquatic Microbial Ecology 40 269 282
spellingShingle Freshwater nanoplankton
Antarctic lakes
DGGE
18S rDNA
Unrein, Fernando
Izaguirre, Irina
Massana, Ramon
Balagué, Vanessa
Gasol, Josep M.
Nanoplankton assemblages in maritime Antarctic lakes: characterisation and molecular fingerprinting comparison
title Nanoplankton assemblages in maritime Antarctic lakes: characterisation and molecular fingerprinting comparison
title_full Nanoplankton assemblages in maritime Antarctic lakes: characterisation and molecular fingerprinting comparison
title_fullStr Nanoplankton assemblages in maritime Antarctic lakes: characterisation and molecular fingerprinting comparison
title_full_unstemmed Nanoplankton assemblages in maritime Antarctic lakes: characterisation and molecular fingerprinting comparison
title_short Nanoplankton assemblages in maritime Antarctic lakes: characterisation and molecular fingerprinting comparison
title_sort nanoplankton assemblages in maritime antarctic lakes: characterisation and molecular fingerprinting comparison
topic Freshwater nanoplankton
Antarctic lakes
DGGE
18S rDNA
topic_facet Freshwater nanoplankton
Antarctic lakes
DGGE
18S rDNA
url http://hdl.handle.net/10261/133661
https://doi.org/10.3354/ame040269