Hierarchical analyses of genetic variation of samples from breeding and feeding grounds confirm the genetic partitioning of northwest Atlantic and South Atlantic populations of swordfish (Xiphias gladius L.)

16 pages, 3 figures, 2 tables In species with high migratory potential, the genetic signal revealing population differentiation is often obscured by population admixture. To our knowledge, the explicit comparison of genetic samples from known spawning and feeding areas has not been conducted for any...

Full description

Bibliographic Details
Published in:Journal of Experimental Marine Biology and Ecology
Main Authors: Alvarado Bremer, Jaime R., Mejuto, Jaime, Gómez-Márquez, J., Boán, F., Carpintero, P., Rodríguez, J. M., Viñas, Jordi, Greig, T.W., Ely, Bert
Format: Article in Journal/Newspaper
Language:unknown
Published: Elsevier 2005
Subjects:
Online Access:http://hdl.handle.net/10261/133562
https://doi.org/10.1016/j.jembe.2005.06.022
id ftcsic:oai:digital.csic.es:10261/133562
record_format openpolar
spelling ftcsic:oai:digital.csic.es:10261/133562 2024-02-11T10:07:14+01:00 Hierarchical analyses of genetic variation of samples from breeding and feeding grounds confirm the genetic partitioning of northwest Atlantic and South Atlantic populations of swordfish (Xiphias gladius L.) Alvarado Bremer, Jaime R. Mejuto, Jaime Gómez-Márquez, J. Boán, F. Carpintero, P. Rodríguez, J. M. Viñas, Jordi Greig, T.W. Ely, Bert 2005-12 http://hdl.handle.net/10261/133562 https://doi.org/10.1016/j.jembe.2005.06.022 unknown Elsevier https://doi.org/10.1016/j.jembe.2005.06.022 Sí doi:10.1016/j.jembe.2005.06.022 issn: 0022-0981 Journal of Experimental Marine Biology and Ecology 327(2): 167-182 (2005) http://hdl.handle.net/10261/133562 none Atlantic swordfish Coalescence D-loop region Mitochondrial DNA control region Molecular variance Population structure artículo http://purl.org/coar/resource_type/c_6501 2005 ftcsic https://doi.org/10.1016/j.jembe.2005.06.022 2024-01-16T10:15:54Z 16 pages, 3 figures, 2 tables In species with high migratory potential, the genetic signal revealing population differentiation is often obscured by population admixture. To our knowledge, the explicit comparison of genetic samples from known spawning and feeding areas has not been conducted for any highly migratory pelagic fish species. This study examines the geographic heterogeneity of swordfish mitochondrial DNA (mtDNA) lineages within the Atlantic Ocean using 330 base pairs of sequence of the control region from 480 individuals. Hierarchical analyses of sequence variation were conducted to test whether samples from areas identified as the corresponding spawning and feeding grounds for the northwest (NW) Atlantic (Caribbean and Georges Banks-US northeast) and the South Atlantic (Brazil-Uruguay and Gulf of Guinea), were more closely related to each other than to samples from any other region, including the Mediterranean Sea, the Indian Ocean, and the Pacific Ocean. Phylogeographic analyses reveal that swordfish mtDNA phylogeny is characterized by incomplete lineage sorting and secondary contact of two highly divergent clades. However, despite this complex phylogenetic signature, results from an analysis of nucleotide diversity and from an analysis of molecular variance (AMOVA) were for the most part concordant and indicate that NW Atlantic and South Atlantic swordfish belong to separate populations. The mtDNA distinctiveness of NW Atlantic and South Atlantic swordfish populations is indicative of philopatric behavior in swordfish towards breeding and feeding areas. © 2005 Elsevier B.V. All rights reserved This study was funded in part by the Texas Institute of Oceanography, and by the Cooperative Institute for Fisheries Molecular Biology (FISHTEC) NOAA-NMFS (RT/F-1) and is listed as FISHTEC contribution number FT 02-05 (number will be provided after final acceptance). Additional support was provided by IEO-4.03 and Economic Union project DGXIV, MED93-013 Peer Reviewed Article in Journal/Newspaper Northwest Atlantic Digital.CSIC (Spanish National Research Council) Indian Pacific Uruguay Journal of Experimental Marine Biology and Ecology 327 2 167 182
institution Open Polar
collection Digital.CSIC (Spanish National Research Council)
op_collection_id ftcsic
language unknown
topic Atlantic swordfish
Coalescence
D-loop region
Mitochondrial DNA control region
Molecular variance
Population structure
spellingShingle Atlantic swordfish
Coalescence
D-loop region
Mitochondrial DNA control region
Molecular variance
Population structure
Alvarado Bremer, Jaime R.
Mejuto, Jaime
Gómez-Márquez, J.
Boán, F.
Carpintero, P.
Rodríguez, J. M.
Viñas, Jordi
Greig, T.W.
Ely, Bert
Hierarchical analyses of genetic variation of samples from breeding and feeding grounds confirm the genetic partitioning of northwest Atlantic and South Atlantic populations of swordfish (Xiphias gladius L.)
topic_facet Atlantic swordfish
Coalescence
D-loop region
Mitochondrial DNA control region
Molecular variance
Population structure
description 16 pages, 3 figures, 2 tables In species with high migratory potential, the genetic signal revealing population differentiation is often obscured by population admixture. To our knowledge, the explicit comparison of genetic samples from known spawning and feeding areas has not been conducted for any highly migratory pelagic fish species. This study examines the geographic heterogeneity of swordfish mitochondrial DNA (mtDNA) lineages within the Atlantic Ocean using 330 base pairs of sequence of the control region from 480 individuals. Hierarchical analyses of sequence variation were conducted to test whether samples from areas identified as the corresponding spawning and feeding grounds for the northwest (NW) Atlantic (Caribbean and Georges Banks-US northeast) and the South Atlantic (Brazil-Uruguay and Gulf of Guinea), were more closely related to each other than to samples from any other region, including the Mediterranean Sea, the Indian Ocean, and the Pacific Ocean. Phylogeographic analyses reveal that swordfish mtDNA phylogeny is characterized by incomplete lineage sorting and secondary contact of two highly divergent clades. However, despite this complex phylogenetic signature, results from an analysis of nucleotide diversity and from an analysis of molecular variance (AMOVA) were for the most part concordant and indicate that NW Atlantic and South Atlantic swordfish belong to separate populations. The mtDNA distinctiveness of NW Atlantic and South Atlantic swordfish populations is indicative of philopatric behavior in swordfish towards breeding and feeding areas. © 2005 Elsevier B.V. All rights reserved This study was funded in part by the Texas Institute of Oceanography, and by the Cooperative Institute for Fisheries Molecular Biology (FISHTEC) NOAA-NMFS (RT/F-1) and is listed as FISHTEC contribution number FT 02-05 (number will be provided after final acceptance). Additional support was provided by IEO-4.03 and Economic Union project DGXIV, MED93-013 Peer Reviewed
format Article in Journal/Newspaper
author Alvarado Bremer, Jaime R.
Mejuto, Jaime
Gómez-Márquez, J.
Boán, F.
Carpintero, P.
Rodríguez, J. M.
Viñas, Jordi
Greig, T.W.
Ely, Bert
author_facet Alvarado Bremer, Jaime R.
Mejuto, Jaime
Gómez-Márquez, J.
Boán, F.
Carpintero, P.
Rodríguez, J. M.
Viñas, Jordi
Greig, T.W.
Ely, Bert
author_sort Alvarado Bremer, Jaime R.
title Hierarchical analyses of genetic variation of samples from breeding and feeding grounds confirm the genetic partitioning of northwest Atlantic and South Atlantic populations of swordfish (Xiphias gladius L.)
title_short Hierarchical analyses of genetic variation of samples from breeding and feeding grounds confirm the genetic partitioning of northwest Atlantic and South Atlantic populations of swordfish (Xiphias gladius L.)
title_full Hierarchical analyses of genetic variation of samples from breeding and feeding grounds confirm the genetic partitioning of northwest Atlantic and South Atlantic populations of swordfish (Xiphias gladius L.)
title_fullStr Hierarchical analyses of genetic variation of samples from breeding and feeding grounds confirm the genetic partitioning of northwest Atlantic and South Atlantic populations of swordfish (Xiphias gladius L.)
title_full_unstemmed Hierarchical analyses of genetic variation of samples from breeding and feeding grounds confirm the genetic partitioning of northwest Atlantic and South Atlantic populations of swordfish (Xiphias gladius L.)
title_sort hierarchical analyses of genetic variation of samples from breeding and feeding grounds confirm the genetic partitioning of northwest atlantic and south atlantic populations of swordfish (xiphias gladius l.)
publisher Elsevier
publishDate 2005
url http://hdl.handle.net/10261/133562
https://doi.org/10.1016/j.jembe.2005.06.022
geographic Indian
Pacific
Uruguay
geographic_facet Indian
Pacific
Uruguay
genre Northwest Atlantic
genre_facet Northwest Atlantic
op_relation https://doi.org/10.1016/j.jembe.2005.06.022

doi:10.1016/j.jembe.2005.06.022
issn: 0022-0981
Journal of Experimental Marine Biology and Ecology 327(2): 167-182 (2005)
http://hdl.handle.net/10261/133562
op_rights none
op_doi https://doi.org/10.1016/j.jembe.2005.06.022
container_title Journal of Experimental Marine Biology and Ecology
container_volume 327
container_issue 2
container_start_page 167
op_container_end_page 182
_version_ 1790605415533248512