Microbial colonization in diverse surface soil types in Surtsey and diversity analysis of its subsurface microbiota

Colonization of life on Surtsey has been observed systematically since the formation of the island 50 years ago. Although the first colonisers were prokaryotes, such as bacteria and blue–green algae, most studies have been focused on the settlement of plants and animals but less on microbial success...

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Published in:Biogeosciences
Main Authors: Marteinsson, V., Klonowski, A., Reynisson, E., Vannier, P., Sigurdsson, B. D., Ólafsson, M.
Format: Text
Language:English
Published: 2018
Subjects:
Online Access:https://doi.org/10.5194/bg-12-1191-2015
https://www.biogeosciences.net/12/1191/2015/
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spelling ftcopernicus:oai:publications.copernicus.org:bg24845 2023-05-15T18:29:15+02:00 Microbial colonization in diverse surface soil types in Surtsey and diversity analysis of its subsurface microbiota Marteinsson, V. Klonowski, A. Reynisson, E. Vannier, P. Sigurdsson, B. D. Ólafsson, M. 2018-09-27 application/pdf https://doi.org/10.5194/bg-12-1191-2015 https://www.biogeosciences.net/12/1191/2015/ eng eng doi:10.5194/bg-12-1191-2015 https://www.biogeosciences.net/12/1191/2015/ eISSN: 1726-4189 Text 2018 ftcopernicus https://doi.org/10.5194/bg-12-1191-2015 2019-12-24T09:53:46Z Colonization of life on Surtsey has been observed systematically since the formation of the island 50 years ago. Although the first colonisers were prokaryotes, such as bacteria and blue–green algae, most studies have been focused on the settlement of plants and animals but less on microbial succession. To explore microbial colonization in diverse soils and the influence of associated vegetation and birds on numbers of environmental bacteria, we collected 45 samples from different soil types on the surface of the island. Total viable bacterial counts were performed with the plate count method at 22, 30 and 37 °C for all soil samples, and the amount of organic matter and nitrogen (N) was measured. Selected samples were also tested for coliforms, faecal coliforms and aerobic and anaerobic bacteria. The subsurface biosphere was investigated by collecting liquid subsurface samples from a 181 m borehole with a special sampler. Diversity analysis of uncultivated biota in samples was performed by 16S rRNA gene sequences analysis and cultivation. Correlation was observed between nutrient deficits and the number of microorganisms in surface soil samples. The lowest number of bacteria (1 × 10 4 –1 × 10 5 cells g −1 ) was detected in almost pure pumice but the count was significantly higher (1 × 10 6 –1 × 10 9 cells g −1 ) in vegetated soil or pumice with bird droppings. The number of faecal bacteria correlated also to the total number of bacteria and type of soil. Bacteria belonging to Enterobacteriaceae were only detected in vegetated samples and samples containing bird droppings. The human pathogens Salmonella , Campylobacter and Listeria were not in any sample. Both thermophilic bacteria and archaea 16S rDNA sequences were found in the subsurface samples collected at 145 and 172 m depth at 80 and 54 °C, respectively, but no growth was observed in enrichments. The microbiota sequences generally showed low affiliation to any known 16S rRNA gene sequences. Text Surtsey Copernicus Publications: E-Journals Surtsey ENVELOPE(-20.608,-20.608,63.301,63.301) Biogeosciences 12 4 1191 1203
institution Open Polar
collection Copernicus Publications: E-Journals
op_collection_id ftcopernicus
language English
description Colonization of life on Surtsey has been observed systematically since the formation of the island 50 years ago. Although the first colonisers were prokaryotes, such as bacteria and blue–green algae, most studies have been focused on the settlement of plants and animals but less on microbial succession. To explore microbial colonization in diverse soils and the influence of associated vegetation and birds on numbers of environmental bacteria, we collected 45 samples from different soil types on the surface of the island. Total viable bacterial counts were performed with the plate count method at 22, 30 and 37 °C for all soil samples, and the amount of organic matter and nitrogen (N) was measured. Selected samples were also tested for coliforms, faecal coliforms and aerobic and anaerobic bacteria. The subsurface biosphere was investigated by collecting liquid subsurface samples from a 181 m borehole with a special sampler. Diversity analysis of uncultivated biota in samples was performed by 16S rRNA gene sequences analysis and cultivation. Correlation was observed between nutrient deficits and the number of microorganisms in surface soil samples. The lowest number of bacteria (1 × 10 4 –1 × 10 5 cells g −1 ) was detected in almost pure pumice but the count was significantly higher (1 × 10 6 –1 × 10 9 cells g −1 ) in vegetated soil or pumice with bird droppings. The number of faecal bacteria correlated also to the total number of bacteria and type of soil. Bacteria belonging to Enterobacteriaceae were only detected in vegetated samples and samples containing bird droppings. The human pathogens Salmonella , Campylobacter and Listeria were not in any sample. Both thermophilic bacteria and archaea 16S rDNA sequences were found in the subsurface samples collected at 145 and 172 m depth at 80 and 54 °C, respectively, but no growth was observed in enrichments. The microbiota sequences generally showed low affiliation to any known 16S rRNA gene sequences.
format Text
author Marteinsson, V.
Klonowski, A.
Reynisson, E.
Vannier, P.
Sigurdsson, B. D.
Ólafsson, M.
spellingShingle Marteinsson, V.
Klonowski, A.
Reynisson, E.
Vannier, P.
Sigurdsson, B. D.
Ólafsson, M.
Microbial colonization in diverse surface soil types in Surtsey and diversity analysis of its subsurface microbiota
author_facet Marteinsson, V.
Klonowski, A.
Reynisson, E.
Vannier, P.
Sigurdsson, B. D.
Ólafsson, M.
author_sort Marteinsson, V.
title Microbial colonization in diverse surface soil types in Surtsey and diversity analysis of its subsurface microbiota
title_short Microbial colonization in diverse surface soil types in Surtsey and diversity analysis of its subsurface microbiota
title_full Microbial colonization in diverse surface soil types in Surtsey and diversity analysis of its subsurface microbiota
title_fullStr Microbial colonization in diverse surface soil types in Surtsey and diversity analysis of its subsurface microbiota
title_full_unstemmed Microbial colonization in diverse surface soil types in Surtsey and diversity analysis of its subsurface microbiota
title_sort microbial colonization in diverse surface soil types in surtsey and diversity analysis of its subsurface microbiota
publishDate 2018
url https://doi.org/10.5194/bg-12-1191-2015
https://www.biogeosciences.net/12/1191/2015/
long_lat ENVELOPE(-20.608,-20.608,63.301,63.301)
geographic Surtsey
geographic_facet Surtsey
genre Surtsey
genre_facet Surtsey
op_source eISSN: 1726-4189
op_relation doi:10.5194/bg-12-1191-2015
https://www.biogeosciences.net/12/1191/2015/
op_doi https://doi.org/10.5194/bg-12-1191-2015
container_title Biogeosciences
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