Marine bacteria in deep Arctic and Antarctic ice cores: a proxy for evolution in oceans over 300 million generations

Using fluorescence spectrometry to map autofluorescence of chlorophyll (Chl) and tryptophan (Trp) versus depth in polar ice cores in the US National Ice Core Laboratory, we found that the Chl and Trp concentrations often showed an annual modulation of up to 25%, with peaks at depths corresponding to...

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Published in:Biogeosciences
Main Authors: Price, P. B., Bay, R. C.
Format: Text
Language:English
Published: 2018
Subjects:
Online Access:https://doi.org/10.5194/bg-9-3799-2012
https://www.biogeosciences.net/9/3799/2012/
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spelling ftcopernicus:oai:publications.copernicus.org:bg15438 2023-05-15T13:45:55+02:00 Marine bacteria in deep Arctic and Antarctic ice cores: a proxy for evolution in oceans over 300 million generations Price, P. B. Bay, R. C. 2018-09-27 application/pdf https://doi.org/10.5194/bg-9-3799-2012 https://www.biogeosciences.net/9/3799/2012/ eng eng doi:10.5194/bg-9-3799-2012 https://www.biogeosciences.net/9/3799/2012/ eISSN: 1726-4189 Text 2018 ftcopernicus https://doi.org/10.5194/bg-9-3799-2012 2019-12-24T09:55:49Z Using fluorescence spectrometry to map autofluorescence of chlorophyll (Chl) and tryptophan (Trp) versus depth in polar ice cores in the US National Ice Core Laboratory, we found that the Chl and Trp concentrations often showed an annual modulation of up to 25%, with peaks at depths corresponding to local summers. Using epifluorescence microscopy (EFM) and flow cytometry (FCM) triggered on red fluorescence at 670 nm to study microbes from unstained melts of the polar ice, we inferred that picocyanobacteria may have been responsible for the red fluorescence in the cores. Micron-size bacteria in all ice melts from Arctic and Antarctic sites showed FCM patterns of scattering and of red vs. orange fluorescence (interpreted as due to Chl vs. phycoerythrin (PE)) that bore similarities to patterns of cultures of unstained picocyanobacteria Prochlorococcus and Synechococcus . Concentrations in ice from all sites were low, but measurable at ~ 1 to ~ 10 3 cells cm −3 . Calibrations showed that FCM patterns of mineral grains and volcanic ash could be distinguished from microbes with high efficiency by triggering on scattering instead of by red fluorescence. Average Chl and PE autofluorescence intensities showed no decrease per cell with time during up to 150 000 yr of storage in glacial ice. Taking into account the annual modulation of ~ 25% and seasonal changes of ocean temperatures and winds, we suggest that picocyanobacteria are wind-transported year-round from warmer ocean waters onto polar ice. Ice cores offer the opportunity to study evolution of marine microbes over ~ 300 million generations by analysing their genomes vs. depth in glacial ice over the last 700 000 yr as frozen proxies for changes in their genomes in oceans. Text Antarc* Antarctic Arctic ice core Copernicus Publications: E-Journals Antarctic Arctic Biogeosciences 9 10 3799 3815
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description Using fluorescence spectrometry to map autofluorescence of chlorophyll (Chl) and tryptophan (Trp) versus depth in polar ice cores in the US National Ice Core Laboratory, we found that the Chl and Trp concentrations often showed an annual modulation of up to 25%, with peaks at depths corresponding to local summers. Using epifluorescence microscopy (EFM) and flow cytometry (FCM) triggered on red fluorescence at 670 nm to study microbes from unstained melts of the polar ice, we inferred that picocyanobacteria may have been responsible for the red fluorescence in the cores. Micron-size bacteria in all ice melts from Arctic and Antarctic sites showed FCM patterns of scattering and of red vs. orange fluorescence (interpreted as due to Chl vs. phycoerythrin (PE)) that bore similarities to patterns of cultures of unstained picocyanobacteria Prochlorococcus and Synechococcus . Concentrations in ice from all sites were low, but measurable at ~ 1 to ~ 10 3 cells cm −3 . Calibrations showed that FCM patterns of mineral grains and volcanic ash could be distinguished from microbes with high efficiency by triggering on scattering instead of by red fluorescence. Average Chl and PE autofluorescence intensities showed no decrease per cell with time during up to 150 000 yr of storage in glacial ice. Taking into account the annual modulation of ~ 25% and seasonal changes of ocean temperatures and winds, we suggest that picocyanobacteria are wind-transported year-round from warmer ocean waters onto polar ice. Ice cores offer the opportunity to study evolution of marine microbes over ~ 300 million generations by analysing their genomes vs. depth in glacial ice over the last 700 000 yr as frozen proxies for changes in their genomes in oceans.
format Text
author Price, P. B.
Bay, R. C.
spellingShingle Price, P. B.
Bay, R. C.
Marine bacteria in deep Arctic and Antarctic ice cores: a proxy for evolution in oceans over 300 million generations
author_facet Price, P. B.
Bay, R. C.
author_sort Price, P. B.
title Marine bacteria in deep Arctic and Antarctic ice cores: a proxy for evolution in oceans over 300 million generations
title_short Marine bacteria in deep Arctic and Antarctic ice cores: a proxy for evolution in oceans over 300 million generations
title_full Marine bacteria in deep Arctic and Antarctic ice cores: a proxy for evolution in oceans over 300 million generations
title_fullStr Marine bacteria in deep Arctic and Antarctic ice cores: a proxy for evolution in oceans over 300 million generations
title_full_unstemmed Marine bacteria in deep Arctic and Antarctic ice cores: a proxy for evolution in oceans over 300 million generations
title_sort marine bacteria in deep arctic and antarctic ice cores: a proxy for evolution in oceans over 300 million generations
publishDate 2018
url https://doi.org/10.5194/bg-9-3799-2012
https://www.biogeosciences.net/9/3799/2012/
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op_source eISSN: 1726-4189
op_relation doi:10.5194/bg-9-3799-2012
https://www.biogeosciences.net/9/3799/2012/
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