Emendation of Rhodomonas marina (Cryptophyceae):insights from morphology, molecular phylogeny and water-soluble pigment in an Arctic isolate.

Rhodomonas (Cryptophyceae) and species assigned to this genus have undergone numerous taxonomic revisions. This also applies to R. marina studied here as it was originally assigned as a species of Cryptomonas and later considered a variation of R. baltica, the type species. Despite being described m...

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Published in:Algae
Main Authors: Daugbjerg, Niels, Devantier, Cecilie B.
Format: Article in Journal/Newspaper
Language:English
Published: 2024
Subjects:
Online Access:https://curis.ku.dk/portal/da/publications/emendation-of-rhodomonas-marina-cryptophyceae(eb4732b0-bf55-4b11-a853-7bf8364873c6).html
https://doi.org/10.4490/algae.2024.39.6.13
https://curis.ku.dk/ws/files/395388663/algae_2024_39_6_13.pdf
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spelling ftcopenhagenunip:oai:pure.atira.dk:publications/eb4732b0-bf55-4b11-a853-7bf8364873c6 2024-09-30T14:27:51+00:00 Emendation of Rhodomonas marina (Cryptophyceae):insights from morphology, molecular phylogeny and water-soluble pigment in an Arctic isolate. Daugbjerg, Niels Devantier, Cecilie B. 2024 application/pdf https://curis.ku.dk/portal/da/publications/emendation-of-rhodomonas-marina-cryptophyceae(eb4732b0-bf55-4b11-a853-7bf8364873c6).html https://doi.org/10.4490/algae.2024.39.6.13 https://curis.ku.dk/ws/files/395388663/algae_2024_39_6_13.pdf eng eng info:eu-repo/semantics/openAccess Daugbjerg , N & Devantier , C B 2024 , ' Emendation of Rhodomonas marina (Cryptophyceae) : insights from morphology, molecular phylogeny and water-soluble pigment in an Arctic isolate. ' , Algae , vol. 39 , no. 2 , pp. 75-96 . https://doi.org/10.4490/algae.2024.39.6.13 article 2024 ftcopenhagenunip https://doi.org/10.4490/algae.2024.39.6.13 2024-09-17T00:25:17Z Rhodomonas (Cryptophyceae) and species assigned to this genus have undergone numerous taxonomic revisions. This also applies to R. marina studied here as it was originally assigned as a species of Cryptomonas and later considered a variation of R. baltica, the type species. Despite being described more than 130 years ago, R. marina still lacks a comprehensive characterization. Light and electron microscopy were employed to delineate a strain from western Greenland. The living cells were 18 μm long and 9 μm wide, elliptical in shape with a pointed to rounded posterior and truncated anterior in lateral view. Two sub-equal flagella emerged from a vestibulum, where also a furrow extended. In transmission electron microscopy, the furrow was associated with a tubular gullet and the pyrenoid embedded in a deeply lobed chloroplast. The chloroplast contained DNA in perforations and was surrounded by starch grains. A tubular nucleomorph was enclosed within the pyrenoid matrix. In scanning electron microscopy, the inner periplast consisted of rectangular plates with rounded edges and posteriorly these were replaced by a sheet-like structure. The water-soluble pigment was Crypto-Phycoerythrin type I (Cr-PE 545). A phylogenetic inference based on SSU rDNA confirmed the identity of strain S18 as a species of Rhodomonas as it clustered with congeners but also Rhinomonas, Storeatula, and Pyrenomonas. These genera formed a monophyletic clade separated from a diverse assemblage of other cryptophyte genera. To further explore the phylogeny of R. marina a concatenated phylogenetic analysis based on the SSU rDNA-ITS1-5.8S rDNA-ITS2- LSU rDNA region was performed but included only closely related species. The secondary structure of nuclear internal transcribed spacer 2 was predicted and compared to similar structures in related species. Using morphological and molecular signatures as diagnostic features the description of R. marina was emended. Article in Journal/Newspaper Arctic Arctic Greenland University of Copenhagen: Research Arctic Greenland Gullet ENVELOPE(14.614,14.614,68.239,68.239) Algae 39 2 75 96
institution Open Polar
collection University of Copenhagen: Research
op_collection_id ftcopenhagenunip
language English
description Rhodomonas (Cryptophyceae) and species assigned to this genus have undergone numerous taxonomic revisions. This also applies to R. marina studied here as it was originally assigned as a species of Cryptomonas and later considered a variation of R. baltica, the type species. Despite being described more than 130 years ago, R. marina still lacks a comprehensive characterization. Light and electron microscopy were employed to delineate a strain from western Greenland. The living cells were 18 μm long and 9 μm wide, elliptical in shape with a pointed to rounded posterior and truncated anterior in lateral view. Two sub-equal flagella emerged from a vestibulum, where also a furrow extended. In transmission electron microscopy, the furrow was associated with a tubular gullet and the pyrenoid embedded in a deeply lobed chloroplast. The chloroplast contained DNA in perforations and was surrounded by starch grains. A tubular nucleomorph was enclosed within the pyrenoid matrix. In scanning electron microscopy, the inner periplast consisted of rectangular plates with rounded edges and posteriorly these were replaced by a sheet-like structure. The water-soluble pigment was Crypto-Phycoerythrin type I (Cr-PE 545). A phylogenetic inference based on SSU rDNA confirmed the identity of strain S18 as a species of Rhodomonas as it clustered with congeners but also Rhinomonas, Storeatula, and Pyrenomonas. These genera formed a monophyletic clade separated from a diverse assemblage of other cryptophyte genera. To further explore the phylogeny of R. marina a concatenated phylogenetic analysis based on the SSU rDNA-ITS1-5.8S rDNA-ITS2- LSU rDNA region was performed but included only closely related species. The secondary structure of nuclear internal transcribed spacer 2 was predicted and compared to similar structures in related species. Using morphological and molecular signatures as diagnostic features the description of R. marina was emended.
format Article in Journal/Newspaper
author Daugbjerg, Niels
Devantier, Cecilie B.
spellingShingle Daugbjerg, Niels
Devantier, Cecilie B.
Emendation of Rhodomonas marina (Cryptophyceae):insights from morphology, molecular phylogeny and water-soluble pigment in an Arctic isolate.
author_facet Daugbjerg, Niels
Devantier, Cecilie B.
author_sort Daugbjerg, Niels
title Emendation of Rhodomonas marina (Cryptophyceae):insights from morphology, molecular phylogeny and water-soluble pigment in an Arctic isolate.
title_short Emendation of Rhodomonas marina (Cryptophyceae):insights from morphology, molecular phylogeny and water-soluble pigment in an Arctic isolate.
title_full Emendation of Rhodomonas marina (Cryptophyceae):insights from morphology, molecular phylogeny and water-soluble pigment in an Arctic isolate.
title_fullStr Emendation of Rhodomonas marina (Cryptophyceae):insights from morphology, molecular phylogeny and water-soluble pigment in an Arctic isolate.
title_full_unstemmed Emendation of Rhodomonas marina (Cryptophyceae):insights from morphology, molecular phylogeny and water-soluble pigment in an Arctic isolate.
title_sort emendation of rhodomonas marina (cryptophyceae):insights from morphology, molecular phylogeny and water-soluble pigment in an arctic isolate.
publishDate 2024
url https://curis.ku.dk/portal/da/publications/emendation-of-rhodomonas-marina-cryptophyceae(eb4732b0-bf55-4b11-a853-7bf8364873c6).html
https://doi.org/10.4490/algae.2024.39.6.13
https://curis.ku.dk/ws/files/395388663/algae_2024_39_6_13.pdf
long_lat ENVELOPE(14.614,14.614,68.239,68.239)
geographic Arctic
Greenland
Gullet
geographic_facet Arctic
Greenland
Gullet
genre Arctic
Arctic
Greenland
genre_facet Arctic
Arctic
Greenland
op_source Daugbjerg , N & Devantier , C B 2024 , ' Emendation of Rhodomonas marina (Cryptophyceae) : insights from morphology, molecular phylogeny and water-soluble pigment in an Arctic isolate. ' , Algae , vol. 39 , no. 2 , pp. 75-96 . https://doi.org/10.4490/algae.2024.39.6.13
op_rights info:eu-repo/semantics/openAccess
op_doi https://doi.org/10.4490/algae.2024.39.6.13
container_title Algae
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