A rational approach to the regioselective deacetylation of 2′,3′,5′-tri-O-acetyluridine by Novozym 435 catalysed alcoholysis

To give a rational explanation for the behaviour of 2′,3′,5′-tri-O-acetyluridine (TAU) catalysed alcoholysis using Novozym 435, the commercial biocatalyst with immobilized Candida antarctica lipase B (CALB), a set of experiments analyzing the role of the alcohol/substrate (A/S) molar ratio, alcohol/...

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Published in:Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics
Main Authors: Gudiño, Esteban Dario, Iglesias, Luis Emilio, Ferreira, María Luján
Format: Article in Journal/Newspaper
Language:English
Published: Elsevier Science
Subjects:
Online Access:http://hdl.handle.net/11336/243530
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author Gudiño, Esteban Dario
Iglesias, Luis Emilio
Ferreira, María Luján
author_facet Gudiño, Esteban Dario
Iglesias, Luis Emilio
Ferreira, María Luján
author_sort Gudiño, Esteban Dario
collection CONICET Digital (Consejo Nacional de Investigaciones Científicas y Técnicas)
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container_start_page 627
container_title Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics
container_volume 1824
description To give a rational explanation for the behaviour of 2′,3′,5′-tri-O-acetyluridine (TAU) catalysed alcoholysis using Novozym 435, the commercial biocatalyst with immobilized Candida antarctica lipase B (CALB), a set of experiments analyzing the role of the alcohol/substrate (A/S) molar ratio, alcohol/biocatalyst (A/B) and substrate/biocatalyst (S/B) mass ratios were carried out. At a A/S = 120 and a S/B = 6.16, 2′,3′-di-O-acetyluridine (DAU) was obtained in 92% at 22 h. The observed trend towards the exclusive formation of DAU at very high alcohol amounts can be explained on the basis of the change of substrate orientation from normal to inverse. The simple molecular modelling analysis supports that key O/H atoms from TAU and the resulting intermediates display the adequate distances to generate productive binding only when the inverse coordination of TAU is present through the 5′-moiety of TAU, at high ethanol concentrations. At these conditions a possible allosteric-like effect of ethanol, combined with water in an H-network in the catalytic triad and in its neighbourhood, could explain the high selectivity towards the production of DAU at selected conditions. Fil: Gudiño, Esteban Dario. Universidad Nacional de Quilmes; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina Fil: Iglesias, Luis Emilio. Universidad Nacional de Quilmes; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina Fil: Ferreira, María Luján. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Bahía Blanca. Planta Piloto de Ingeniería Química. Universidad Nacional del Sur. Planta Piloto de Ingeniería Química; Argentina
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spelling ftconicet:oai:ri.conicet.gov.ar:11336/243530 2025-01-16T19:14:56+00:00 A rational approach to the regioselective deacetylation of 2′,3′,5′-tri-O-acetyluridine by Novozym 435 catalysed alcoholysis Gudiño, Esteban Dario Iglesias, Luis Emilio Ferreira, María Luján application/pdf http://hdl.handle.net/11336/243530 eng eng Elsevier Science info:eu-repo/semantics/altIdentifier/url/http://www.sciencedirect.com/science/article/pii/S157096391200012X info:eu-repo/semantics/altIdentifier/doi/10.1016/j.bbapap.2012.01.009 http://hdl.handle.net/11336/243530 CONICET Digital CONICET info:eu-repo/semantics/restrictedAccess https://creativecommons.org/licenses/by-nc-sa/2.5/ar/ Candida antarctica lipase B Molecular modeling Nucleoside Regioselectivity https://purl.org/becyt/ford/1.4 https://purl.org/becyt/ford/1 info:eu-repo/semantics/article info:ar-repo/semantics/artículo info:eu-repo/semantics/publishedVersion ftconicet https://doi.org/10.1016/j.bbapap.2012.01.009 2024-10-04T09:34:23Z To give a rational explanation for the behaviour of 2′,3′,5′-tri-O-acetyluridine (TAU) catalysed alcoholysis using Novozym 435, the commercial biocatalyst with immobilized Candida antarctica lipase B (CALB), a set of experiments analyzing the role of the alcohol/substrate (A/S) molar ratio, alcohol/biocatalyst (A/B) and substrate/biocatalyst (S/B) mass ratios were carried out. At a A/S = 120 and a S/B = 6.16, 2′,3′-di-O-acetyluridine (DAU) was obtained in 92% at 22 h. The observed trend towards the exclusive formation of DAU at very high alcohol amounts can be explained on the basis of the change of substrate orientation from normal to inverse. The simple molecular modelling analysis supports that key O/H atoms from TAU and the resulting intermediates display the adequate distances to generate productive binding only when the inverse coordination of TAU is present through the 5′-moiety of TAU, at high ethanol concentrations. At these conditions a possible allosteric-like effect of ethanol, combined with water in an H-network in the catalytic triad and in its neighbourhood, could explain the high selectivity towards the production of DAU at selected conditions. Fil: Gudiño, Esteban Dario. Universidad Nacional de Quilmes; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina Fil: Iglesias, Luis Emilio. Universidad Nacional de Quilmes; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina Fil: Ferreira, María Luján. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Bahía Blanca. Planta Piloto de Ingeniería Química. Universidad Nacional del Sur. Planta Piloto de Ingeniería Química; Argentina Article in Journal/Newspaper Antarc* Antarctica CONICET Digital (Consejo Nacional de Investigaciones Científicas y Técnicas) Argentina Ferreira ENVELOPE(-62.050,-62.050,-64.600,-64.600) Quilmes ENVELOPE(-55.617,-55.617,-63.233,-63.233) Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics 1824 4 627 636
spellingShingle Candida antarctica lipase B
Molecular modeling
Nucleoside
Regioselectivity
https://purl.org/becyt/ford/1.4
https://purl.org/becyt/ford/1
Gudiño, Esteban Dario
Iglesias, Luis Emilio
Ferreira, María Luján
A rational approach to the regioselective deacetylation of 2′,3′,5′-tri-O-acetyluridine by Novozym 435 catalysed alcoholysis
title A rational approach to the regioselective deacetylation of 2′,3′,5′-tri-O-acetyluridine by Novozym 435 catalysed alcoholysis
title_full A rational approach to the regioselective deacetylation of 2′,3′,5′-tri-O-acetyluridine by Novozym 435 catalysed alcoholysis
title_fullStr A rational approach to the regioselective deacetylation of 2′,3′,5′-tri-O-acetyluridine by Novozym 435 catalysed alcoholysis
title_full_unstemmed A rational approach to the regioselective deacetylation of 2′,3′,5′-tri-O-acetyluridine by Novozym 435 catalysed alcoholysis
title_short A rational approach to the regioselective deacetylation of 2′,3′,5′-tri-O-acetyluridine by Novozym 435 catalysed alcoholysis
title_sort rational approach to the regioselective deacetylation of 2′,3′,5′-tri-o-acetyluridine by novozym 435 catalysed alcoholysis
topic Candida antarctica lipase B
Molecular modeling
Nucleoside
Regioselectivity
https://purl.org/becyt/ford/1.4
https://purl.org/becyt/ford/1
topic_facet Candida antarctica lipase B
Molecular modeling
Nucleoside
Regioselectivity
https://purl.org/becyt/ford/1.4
https://purl.org/becyt/ford/1
url http://hdl.handle.net/11336/243530