Microdiverse bacterial clades prevail across Antarctic wetlands

Antarctica's extreme environmental conditions impose selection pressures on microbial communities. Indeed, a previous study revealed that bacterial assemblages at the Cierva Point Wetland Complex (CPWC) are shaped by strong homogeneous selection. Yet which bacterial phylogenetic clades are shap...

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Published in:Molecular Ecology
Main Authors: Quiroga, María Victoria, Stegen, James C., Mataloni, Maria Gabriela, Cowan, Don, Lebre, Pedro H., Valverde, Angel
Format: Article in Journal/Newspaper
Language:English
Published: Wiley Blackwell Publishing, Inc
Subjects:
Online Access:http://hdl.handle.net/11336/220347
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author Quiroga, María Victoria
Stegen, James C.
Mataloni, Maria Gabriela
Cowan, Don
Lebre, Pedro H.
Valverde, Angel
author_facet Quiroga, María Victoria
Stegen, James C.
Mataloni, Maria Gabriela
Cowan, Don
Lebre, Pedro H.
Valverde, Angel
author_sort Quiroga, María Victoria
collection CONICET Digital (Consejo Nacional de Investigaciones Científicas y Técnicas)
container_issue 1
container_title Molecular Ecology
container_volume 33
description Antarctica's extreme environmental conditions impose selection pressures on microbial communities. Indeed, a previous study revealed that bacterial assemblages at the Cierva Point Wetland Complex (CPWC) are shaped by strong homogeneous selection. Yet which bacterial phylogenetic clades are shaped by selection processes and their ecological strategies to thrive in such extreme conditions remain unknown. Here, we applied the phyloscore and feature-level βNTI indexes coupled with phylofactorization to successfully detect bacterial monophyletic clades subjected to homogeneous (HoS) and heterogenous (HeS) selection. Remarkably, only the HoS clades showed high relative abundance across all samples and signs of putative microdiversity. The majority of the amplicon sequence variants (ASVs) within each HoS clade clustered into a unique 97% sequence similarity operational taxonomic unit (OTU) and inhabited a specific environment (lotic, lentic or terrestrial). Our findings suggest the existence of microdiversification leading to sub-taxa niche differentiation, with putative distinct ecotypes (consisting of groups of ASVs) adapted to a specific environment. We hypothesize that HoS clades thriving in the CPWC have phylogenetically conserved traits that accelerate their rate of evolution, enabling them to adapt to strong spatio-temporally variable selection pressures. Variable selection appears to operate within clades to cause very rapid microdiversification without losing key traits that lead to high abundance. Variable and homogeneous selection, therefore, operate simultaneously but on different aspects of organismal ecology. The result is an overall signal of homogeneous selection due to rapid within-clade microdiversification caused by variable selection. It is unknown whether other systems experience this dynamic, and we encourage future work evaluating the transferability of our results. Fil: Quiroga, María Victoria. Universidad Nacional de San Martin. Instituto Tecnologico de Chascomus. - Consejo Nacional de ...
format Article in Journal/Newspaper
genre Antarc*
Antarctic
Antarctica
genre_facet Antarc*
Antarctic
Antarctica
geographic Antarctic
Cierva
Cierva Point
geographic_facet Antarctic
Cierva
Cierva Point
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language English
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spelling ftconicet:oai:ri.conicet.gov.ar:11336/220347 2025-01-16T19:42:23+00:00 Microdiverse bacterial clades prevail across Antarctic wetlands Quiroga, María Victoria Stegen, James C. Mataloni, Maria Gabriela Cowan, Don Lebre, Pedro H. Valverde, Angel application/pdf http://hdl.handle.net/11336/220347 eng eng Wiley Blackwell Publishing, Inc info:eu-repo/semantics/altIdentifier/url/https://onlinelibrary.wiley.com/doi/10.1111/mec.17189 info:eu-repo/semantics/altIdentifier/doi/10.1111/mec.17189 http://hdl.handle.net/11336/220347 CONICET Digital CONICET info:eu-repo/semantics/openAccess https://creativecommons.org/licenses/by-nc-nd/2.5/ar/ ANTARCTICA HOMOGENEOUS SELECTION MICRODIVERSITY NULL MODELS https://purl.org/becyt/ford/1.6 https://purl.org/becyt/ford/1 info:eu-repo/semantics/article info:ar-repo/semantics/artículo info:eu-repo/semantics/publishedVersion ftconicet https://doi.org/10.1111/mec.17189 2024-10-04T09:34:25Z Antarctica's extreme environmental conditions impose selection pressures on microbial communities. Indeed, a previous study revealed that bacterial assemblages at the Cierva Point Wetland Complex (CPWC) are shaped by strong homogeneous selection. Yet which bacterial phylogenetic clades are shaped by selection processes and their ecological strategies to thrive in such extreme conditions remain unknown. Here, we applied the phyloscore and feature-level βNTI indexes coupled with phylofactorization to successfully detect bacterial monophyletic clades subjected to homogeneous (HoS) and heterogenous (HeS) selection. Remarkably, only the HoS clades showed high relative abundance across all samples and signs of putative microdiversity. The majority of the amplicon sequence variants (ASVs) within each HoS clade clustered into a unique 97% sequence similarity operational taxonomic unit (OTU) and inhabited a specific environment (lotic, lentic or terrestrial). Our findings suggest the existence of microdiversification leading to sub-taxa niche differentiation, with putative distinct ecotypes (consisting of groups of ASVs) adapted to a specific environment. We hypothesize that HoS clades thriving in the CPWC have phylogenetically conserved traits that accelerate their rate of evolution, enabling them to adapt to strong spatio-temporally variable selection pressures. Variable selection appears to operate within clades to cause very rapid microdiversification without losing key traits that lead to high abundance. Variable and homogeneous selection, therefore, operate simultaneously but on different aspects of organismal ecology. The result is an overall signal of homogeneous selection due to rapid within-clade microdiversification caused by variable selection. It is unknown whether other systems experience this dynamic, and we encourage future work evaluating the transferability of our results. Fil: Quiroga, María Victoria. Universidad Nacional de San Martin. Instituto Tecnologico de Chascomus. - Consejo Nacional de ... Article in Journal/Newspaper Antarc* Antarctic Antarctica CONICET Digital (Consejo Nacional de Investigaciones Científicas y Técnicas) Antarctic Cierva ENVELOPE(-60.873,-60.873,-64.156,-64.156) Cierva Point ENVELOPE(-60.967,-60.967,-64.150,-64.150) Molecular Ecology 33 1
spellingShingle ANTARCTICA
HOMOGENEOUS SELECTION
MICRODIVERSITY
NULL MODELS
https://purl.org/becyt/ford/1.6
https://purl.org/becyt/ford/1
Quiroga, María Victoria
Stegen, James C.
Mataloni, Maria Gabriela
Cowan, Don
Lebre, Pedro H.
Valverde, Angel
Microdiverse bacterial clades prevail across Antarctic wetlands
title Microdiverse bacterial clades prevail across Antarctic wetlands
title_full Microdiverse bacterial clades prevail across Antarctic wetlands
title_fullStr Microdiverse bacterial clades prevail across Antarctic wetlands
title_full_unstemmed Microdiverse bacterial clades prevail across Antarctic wetlands
title_short Microdiverse bacterial clades prevail across Antarctic wetlands
title_sort microdiverse bacterial clades prevail across antarctic wetlands
topic ANTARCTICA
HOMOGENEOUS SELECTION
MICRODIVERSITY
NULL MODELS
https://purl.org/becyt/ford/1.6
https://purl.org/becyt/ford/1
topic_facet ANTARCTICA
HOMOGENEOUS SELECTION
MICRODIVERSITY
NULL MODELS
https://purl.org/becyt/ford/1.6
https://purl.org/becyt/ford/1
url http://hdl.handle.net/11336/220347