The ecological assembly of bacterial communities in Antarctic wetlands varies across levels of phylogenetic resolution

As functional traits are conserved at different phylogenetic depths, the ability to detect community assembly processes can be conditional on the phylogenetic resolution; yet most previous work quantifying their influence has focused on a single level of phylogenetic resolution. Here, we have studie...

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Published in:Environmental Microbiology
Main Authors: Quiroga, María Victoria, Valverde, Angel, Mataloni, Maria Gabriela, Casa, Valeria, Stegen, James C., Cowan, DoN
Format: Article in Journal/Newspaper
Language:English
Published: Wiley Blackwell Publishing, Inc
Subjects:
Online Access:http://hdl.handle.net/11336/204231
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spelling ftconicet:oai:ri.conicet.gov.ar:11336/204231 2023-10-09T21:47:06+02:00 The ecological assembly of bacterial communities in Antarctic wetlands varies across levels of phylogenetic resolution Quiroga, María Victoria Valverde, Angel Mataloni, Maria Gabriela Casa, Valeria Stegen, James C. Cowan, DoN application/pdf http://hdl.handle.net/11336/204231 eng eng Wiley Blackwell Publishing, Inc info:eu-repo/semantics/altIdentifier/url/https://ami-journals.onlinelibrary.wiley.com/doi/10.1111/1462-2920.15912 info:eu-repo/semantics/altIdentifier/doi/10.1111/1462-2920.15912 http://hdl.handle.net/11336/204231 Quiroga, María Victoria; Valverde, Angel; Mataloni, Maria Gabriela; Casa, Valeria; Stegen, James C.; et al.; The ecological assembly of bacterial communities in Antarctic wetlands varies across levels of phylogenetic resolution; Wiley Blackwell Publishing, Inc; Environmental Microbiology; 24; 8; 8-2022; 3486-3499 1462-2912 CONICET Digital CONICET info:eu-repo/semantics/openAccess https://creativecommons.org/licenses/by-nc-nd/2.5/ar/ Antarctic Phylogenetic resolution https://purl.org/becyt/ford/1.6 https://purl.org/becyt/ford/1 info:eu-repo/semantics/article info:ar-repo/semantics/artículo info:eu-repo/semantics/publishedVersion ftconicet https://doi.org/10.1111/1462-2920.15912 2023-09-24T20:34:10Z As functional traits are conserved at different phylogenetic depths, the ability to detect community assembly processes can be conditional on the phylogenetic resolution; yet most previous work quantifying their influence has focused on a single level of phylogenetic resolution. Here, we have studied the ecological assembly of bacterial communities from an Antarctic wetland complex, applying null models across different levels of phylogenetic resolution (i.e. clustering ASVs into OTUs with decreasing sequence identity thresholds). We found that the relative influence of the community assembly processes varies with phylogenetic resolution. More specifically, selection processes seem to impose stronger influence at finer (100% sequence similarity ASV) than at coarser (99%–97% sequence similarity OTUs) resolution. We identified environmental features related with the ecological processes and propose a conceptual model for the bacterial community assembly in this Antarctic ecosystem. Briefly, eco-evolutionary processes appear to be leading to different but very closely related ASVs in lotic, lentic and terrestrial environments. In all, this study shows that assessing community assembly processes at different phylogenetic resolutions is key to improve our understanding of microbial ecology. More importantly, a failure to detect selection processes at coarser phylogenetic resolution does not imply the absence of such processes at finer resolutions. Fil: Quiroga, María Victoria. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - La Plata. Instituto de Investigaciones Biotecnológicas. Universidad Nacional de San Martín. Instituto de Investigaciones Biotecnológicas; Argentina Fil: Valverde, Angel. Universidad de Salamanca; España Fil: Mataloni, Maria Gabriela. Universidad Nacional de San Martín. Instituto de Investigación e Ingeniería Ambiental. - Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Parque Centenario. ... Article in Journal/Newspaper Antarc* Antarctic CONICET Digital (Consejo Nacional de Investigaciones Científicas y Técnicas) Antarctic Argentina San Martín ENVELOPE(-67.133,-67.133,-68.117,-68.117) Environmental Microbiology 24 8 3486 3499
institution Open Polar
collection CONICET Digital (Consejo Nacional de Investigaciones Científicas y Técnicas)
op_collection_id ftconicet
language English
topic Antarctic
Phylogenetic resolution
https://purl.org/becyt/ford/1.6
https://purl.org/becyt/ford/1
spellingShingle Antarctic
Phylogenetic resolution
https://purl.org/becyt/ford/1.6
https://purl.org/becyt/ford/1
Quiroga, María Victoria
Valverde, Angel
Mataloni, Maria Gabriela
Casa, Valeria
Stegen, James C.
Cowan, DoN
The ecological assembly of bacterial communities in Antarctic wetlands varies across levels of phylogenetic resolution
topic_facet Antarctic
Phylogenetic resolution
https://purl.org/becyt/ford/1.6
https://purl.org/becyt/ford/1
description As functional traits are conserved at different phylogenetic depths, the ability to detect community assembly processes can be conditional on the phylogenetic resolution; yet most previous work quantifying their influence has focused on a single level of phylogenetic resolution. Here, we have studied the ecological assembly of bacterial communities from an Antarctic wetland complex, applying null models across different levels of phylogenetic resolution (i.e. clustering ASVs into OTUs with decreasing sequence identity thresholds). We found that the relative influence of the community assembly processes varies with phylogenetic resolution. More specifically, selection processes seem to impose stronger influence at finer (100% sequence similarity ASV) than at coarser (99%–97% sequence similarity OTUs) resolution. We identified environmental features related with the ecological processes and propose a conceptual model for the bacterial community assembly in this Antarctic ecosystem. Briefly, eco-evolutionary processes appear to be leading to different but very closely related ASVs in lotic, lentic and terrestrial environments. In all, this study shows that assessing community assembly processes at different phylogenetic resolutions is key to improve our understanding of microbial ecology. More importantly, a failure to detect selection processes at coarser phylogenetic resolution does not imply the absence of such processes at finer resolutions. Fil: Quiroga, María Victoria. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - La Plata. Instituto de Investigaciones Biotecnológicas. Universidad Nacional de San Martín. Instituto de Investigaciones Biotecnológicas; Argentina Fil: Valverde, Angel. Universidad de Salamanca; España Fil: Mataloni, Maria Gabriela. Universidad Nacional de San Martín. Instituto de Investigación e Ingeniería Ambiental. - Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Parque Centenario. ...
format Article in Journal/Newspaper
author Quiroga, María Victoria
Valverde, Angel
Mataloni, Maria Gabriela
Casa, Valeria
Stegen, James C.
Cowan, DoN
author_facet Quiroga, María Victoria
Valverde, Angel
Mataloni, Maria Gabriela
Casa, Valeria
Stegen, James C.
Cowan, DoN
author_sort Quiroga, María Victoria
title The ecological assembly of bacterial communities in Antarctic wetlands varies across levels of phylogenetic resolution
title_short The ecological assembly of bacterial communities in Antarctic wetlands varies across levels of phylogenetic resolution
title_full The ecological assembly of bacterial communities in Antarctic wetlands varies across levels of phylogenetic resolution
title_fullStr The ecological assembly of bacterial communities in Antarctic wetlands varies across levels of phylogenetic resolution
title_full_unstemmed The ecological assembly of bacterial communities in Antarctic wetlands varies across levels of phylogenetic resolution
title_sort ecological assembly of bacterial communities in antarctic wetlands varies across levels of phylogenetic resolution
publisher Wiley Blackwell Publishing, Inc
url http://hdl.handle.net/11336/204231
long_lat ENVELOPE(-67.133,-67.133,-68.117,-68.117)
geographic Antarctic
Argentina
San Martín
geographic_facet Antarctic
Argentina
San Martín
genre Antarc*
Antarctic
genre_facet Antarc*
Antarctic
op_relation info:eu-repo/semantics/altIdentifier/url/https://ami-journals.onlinelibrary.wiley.com/doi/10.1111/1462-2920.15912
info:eu-repo/semantics/altIdentifier/doi/10.1111/1462-2920.15912
http://hdl.handle.net/11336/204231
Quiroga, María Victoria; Valverde, Angel; Mataloni, Maria Gabriela; Casa, Valeria; Stegen, James C.; et al.; The ecological assembly of bacterial communities in Antarctic wetlands varies across levels of phylogenetic resolution; Wiley Blackwell Publishing, Inc; Environmental Microbiology; 24; 8; 8-2022; 3486-3499
1462-2912
CONICET Digital
CONICET
op_rights info:eu-repo/semantics/openAccess
https://creativecommons.org/licenses/by-nc-nd/2.5/ar/
op_doi https://doi.org/10.1111/1462-2920.15912
container_title Environmental Microbiology
container_volume 24
container_issue 8
container_start_page 3486
op_container_end_page 3499
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