Prokaryotic diversity and biogeochemical characteristics of benthic microbial ecosystems from James Ross Archipelago (West Antarctica)

The James Ross archipelago houses numerous lakes and ponds. In this region, a vast diatom and cyanobacterial variety has been reported; however, the prokaryotic diversity in microbial mats from these lakes remains poorly explored. Here, a high-throughput sequencing of 16S rRNA gene in microbial mats...

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Published in:Polar Biology
Main Authors: Fernández, Guillermo César, Lecomte, Karina Leticia, Vignoni, Paula, Soto Rueda, Eliana Marcela, Coria, Silvia Herminda, Lirio, Juan Manuel, Mlewski, Estela Cecilia
Format: Article in Journal/Newspaper
Language:English
Published: Springer
Subjects:
Online Access:http://hdl.handle.net/11336/193950
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spelling ftconicet:oai:ri.conicet.gov.ar:11336/193950 2023-10-09T21:47:13+02:00 Prokaryotic diversity and biogeochemical characteristics of benthic microbial ecosystems from James Ross Archipelago (West Antarctica) Fernández, Guillermo César Lecomte, Karina Leticia Vignoni, Paula Soto Rueda, Eliana Marcela Coria, Silvia Herminda Lirio, Juan Manuel Mlewski, Estela Cecilia application/pdf http://hdl.handle.net/11336/193950 eng eng Springer info:eu-repo/semantics/altIdentifier/url/https://link.springer.com/10.1007/s00300-021-02997-z info:eu-repo/semantics/altIdentifier/doi/10.1007/s00300-021-02997-z http://hdl.handle.net/11336/193950 Fernández, Guillermo César; Lecomte, Karina Leticia; Vignoni, Paula; Soto Rueda, Eliana Marcela; Coria, Silvia Herminda; et al.; Prokaryotic diversity and biogeochemical characteristics of benthic microbial ecosystems from James Ross Archipelago (West Antarctica); Springer; Polar Biology; 45; 3; 1-2022; 405-418 0722-4060 CONICET Digital CONICET info:eu-repo/semantics/restrictedAccess https://creativecommons.org/licenses/by-nc-sa/2.5/ar/ 16S RRNA GENES ANTARCTICA JAMES ROSS ARCHIPELAGO MICROBIAL DIVERSITY MICROBIAL MATS https://purl.org/becyt/ford/1.5 https://purl.org/becyt/ford/1 info:eu-repo/semantics/article info:ar-repo/semantics/artículo info:eu-repo/semantics/publishedVersion ftconicet https://doi.org/10.1007/s00300-021-02997-z 2023-09-24T20:11:09Z The James Ross archipelago houses numerous lakes and ponds. In this region, a vast diatom and cyanobacterial variety has been reported; however, the prokaryotic diversity in microbial mats from these lakes remains poorly explored. Here, a high-throughput sequencing of 16S rRNA gene in microbial mats from Lake Bart-Roja in James Ross Island and lakes Pan Negro and North Pan Negro located in Vega Island was performed. Combined with mineralogical and environmental characteristics, we analyzed the diversity and structure of the microbial communities. Sequences assigned to Archaea were extremely low, while Bacteria domain prevailed with the abundance of Proteobacteria (mostly Betaproteobacteriales) followed by Bacteroidetes, Verrucomicrobia, Firmicutes, and Cyanobacteria. Local environmental conditions, such as conductivity and Eh, provided differential microbial assemblages that might have implications in the oligotrophic status of the lakes. Consequently, a clear segregation at the family level was observed. In this sense, the assigned diversity was related to taxa recognized as denitrifiers and sulfur oxidizers. Particularly, in Lake Pan Negro sulfur-reducing and methanogenic representatives were also found and positively correlate with alkalinity and water depth. Moreover, Deinococcus-Thermus was observed in Lake Bart-Roja, while Melainabacteria (Cyanobacteria)—poorly reported in Antarctic mats—was detected in Lake Pan Negro. Epsilonbacteraeota was exclusively found in this lake, suggesting new potential phylotypes. This study contributes to the understanding of the diversity, composition, and structure of Antarctic benthic microbial ecosystems and provides highly valuable information, which can be used as a proxy to evaluate environmental changes affecting Antarctic microbiota. Fil: Fernández, Guillermo César. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Córdoba. Centro de Investigaciones en Ciencias de la Tierra. Universidad Nacional de Córdoba. Facultad ... Article in Journal/Newspaper Antarc* Antarctic Antarctica James Ross Island Polar Biology Ross Archipelago Ross Island Vega Island West Antarctica CONICET Digital (Consejo Nacional de Investigaciones Científicas y Técnicas) Antarctic West Antarctica Ross Island Roja ENVELOPE(-67.150,-67.150,-68.317,-68.317) Vega Island ENVELOPE(-57.500,-57.500,-63.833,-63.833) Ross Archipelago ENVELOPE(167.000,167.000,-77.500,-77.500) Polar Biology 45 3 405 418
institution Open Polar
collection CONICET Digital (Consejo Nacional de Investigaciones Científicas y Técnicas)
op_collection_id ftconicet
language English
topic 16S RRNA GENES
ANTARCTICA
JAMES ROSS ARCHIPELAGO
MICROBIAL DIVERSITY
MICROBIAL MATS
https://purl.org/becyt/ford/1.5
https://purl.org/becyt/ford/1
spellingShingle 16S RRNA GENES
ANTARCTICA
JAMES ROSS ARCHIPELAGO
MICROBIAL DIVERSITY
MICROBIAL MATS
https://purl.org/becyt/ford/1.5
https://purl.org/becyt/ford/1
Fernández, Guillermo César
Lecomte, Karina Leticia
Vignoni, Paula
Soto Rueda, Eliana Marcela
Coria, Silvia Herminda
Lirio, Juan Manuel
Mlewski, Estela Cecilia
Prokaryotic diversity and biogeochemical characteristics of benthic microbial ecosystems from James Ross Archipelago (West Antarctica)
topic_facet 16S RRNA GENES
ANTARCTICA
JAMES ROSS ARCHIPELAGO
MICROBIAL DIVERSITY
MICROBIAL MATS
https://purl.org/becyt/ford/1.5
https://purl.org/becyt/ford/1
description The James Ross archipelago houses numerous lakes and ponds. In this region, a vast diatom and cyanobacterial variety has been reported; however, the prokaryotic diversity in microbial mats from these lakes remains poorly explored. Here, a high-throughput sequencing of 16S rRNA gene in microbial mats from Lake Bart-Roja in James Ross Island and lakes Pan Negro and North Pan Negro located in Vega Island was performed. Combined with mineralogical and environmental characteristics, we analyzed the diversity and structure of the microbial communities. Sequences assigned to Archaea were extremely low, while Bacteria domain prevailed with the abundance of Proteobacteria (mostly Betaproteobacteriales) followed by Bacteroidetes, Verrucomicrobia, Firmicutes, and Cyanobacteria. Local environmental conditions, such as conductivity and Eh, provided differential microbial assemblages that might have implications in the oligotrophic status of the lakes. Consequently, a clear segregation at the family level was observed. In this sense, the assigned diversity was related to taxa recognized as denitrifiers and sulfur oxidizers. Particularly, in Lake Pan Negro sulfur-reducing and methanogenic representatives were also found and positively correlate with alkalinity and water depth. Moreover, Deinococcus-Thermus was observed in Lake Bart-Roja, while Melainabacteria (Cyanobacteria)—poorly reported in Antarctic mats—was detected in Lake Pan Negro. Epsilonbacteraeota was exclusively found in this lake, suggesting new potential phylotypes. This study contributes to the understanding of the diversity, composition, and structure of Antarctic benthic microbial ecosystems and provides highly valuable information, which can be used as a proxy to evaluate environmental changes affecting Antarctic microbiota. Fil: Fernández, Guillermo César. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Córdoba. Centro de Investigaciones en Ciencias de la Tierra. Universidad Nacional de Córdoba. Facultad ...
format Article in Journal/Newspaper
author Fernández, Guillermo César
Lecomte, Karina Leticia
Vignoni, Paula
Soto Rueda, Eliana Marcela
Coria, Silvia Herminda
Lirio, Juan Manuel
Mlewski, Estela Cecilia
author_facet Fernández, Guillermo César
Lecomte, Karina Leticia
Vignoni, Paula
Soto Rueda, Eliana Marcela
Coria, Silvia Herminda
Lirio, Juan Manuel
Mlewski, Estela Cecilia
author_sort Fernández, Guillermo César
title Prokaryotic diversity and biogeochemical characteristics of benthic microbial ecosystems from James Ross Archipelago (West Antarctica)
title_short Prokaryotic diversity and biogeochemical characteristics of benthic microbial ecosystems from James Ross Archipelago (West Antarctica)
title_full Prokaryotic diversity and biogeochemical characteristics of benthic microbial ecosystems from James Ross Archipelago (West Antarctica)
title_fullStr Prokaryotic diversity and biogeochemical characteristics of benthic microbial ecosystems from James Ross Archipelago (West Antarctica)
title_full_unstemmed Prokaryotic diversity and biogeochemical characteristics of benthic microbial ecosystems from James Ross Archipelago (West Antarctica)
title_sort prokaryotic diversity and biogeochemical characteristics of benthic microbial ecosystems from james ross archipelago (west antarctica)
publisher Springer
url http://hdl.handle.net/11336/193950
long_lat ENVELOPE(-67.150,-67.150,-68.317,-68.317)
ENVELOPE(-57.500,-57.500,-63.833,-63.833)
ENVELOPE(167.000,167.000,-77.500,-77.500)
geographic Antarctic
West Antarctica
Ross Island
Roja
Vega Island
Ross Archipelago
geographic_facet Antarctic
West Antarctica
Ross Island
Roja
Vega Island
Ross Archipelago
genre Antarc*
Antarctic
Antarctica
James Ross Island
Polar Biology
Ross Archipelago
Ross Island
Vega Island
West Antarctica
genre_facet Antarc*
Antarctic
Antarctica
James Ross Island
Polar Biology
Ross Archipelago
Ross Island
Vega Island
West Antarctica
op_relation info:eu-repo/semantics/altIdentifier/url/https://link.springer.com/10.1007/s00300-021-02997-z
info:eu-repo/semantics/altIdentifier/doi/10.1007/s00300-021-02997-z
http://hdl.handle.net/11336/193950
Fernández, Guillermo César; Lecomte, Karina Leticia; Vignoni, Paula; Soto Rueda, Eliana Marcela; Coria, Silvia Herminda; et al.; Prokaryotic diversity and biogeochemical characteristics of benthic microbial ecosystems from James Ross Archipelago (West Antarctica); Springer; Polar Biology; 45; 3; 1-2022; 405-418
0722-4060
CONICET Digital
CONICET
op_rights info:eu-repo/semantics/restrictedAccess
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
op_doi https://doi.org/10.1007/s00300-021-02997-z
container_title Polar Biology
container_volume 45
container_issue 3
container_start_page 405
op_container_end_page 418
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