The expansion of exotic Chinook salmon (Oncorhynchus tshawytscha) in the extreme south of Patagonia: an environmental DNA approach

The ability to detect species at low densities, greatly improves the success of management action on alien invasive species and decreases their possible impact on ecosystems. In the last two decades, exotic Chinook salmon (Oncorhynchus tshawytscha) have established populations in both Pacific and At...

Full description

Bibliographic Details
Published in:Biological Invasions
Main Authors: Nardi, Cristina Fernanda, Fernandez, Daniel Alfredo, Vanella, Fabián Alberto, Chalde, Tomás
Format: Article in Journal/Newspaper
Language:English
Published: Springer
Subjects:
Online Access:http://hdl.handle.net/11336/147676
id ftconicet:oai:ri.conicet.gov.ar:11336/147676
record_format openpolar
spelling ftconicet:oai:ri.conicet.gov.ar:11336/147676 2023-10-09T21:47:20+02:00 The expansion of exotic Chinook salmon (Oncorhynchus tshawytscha) in the extreme south of Patagonia: an environmental DNA approach Nardi, Cristina Fernanda Fernandez, Daniel Alfredo Vanella, Fabián Alberto Chalde, Tomás application/pdf http://hdl.handle.net/11336/147676 eng eng Springer info:eu-repo/semantics/altIdentifier/url/https://link.springer.com/article/10.1007%2Fs10530-018-1908-8 info:eu-repo/semantics/altIdentifier/doi/10.1007/S10530-018-1908-8 http://hdl.handle.net/11336/147676 Nardi, Cristina Fernanda; Fernandez, Daniel Alfredo; Vanella, Fabián Alberto; Chalde, Tomás; The expansion of exotic Chinook salmon (Oncorhynchus tshawytscha) in the extreme south of Patagonia: an environmental DNA approach; Springer; Biological Invasions; 21; 4; 1-2019; 1415-1425 1387-3547 CONICET Digital CONICET info:eu-repo/semantics/openAccess https://creativecommons.org/licenses/by-nc-sa/2.5/ar/ ALIEN INVASIVE SPECIES EDNA NON-NATIVE SPECIES SALMONIDS SOUTH AMERICA TIERRA DEL FUEGO https://purl.org/becyt/ford/1.6 https://purl.org/becyt/ford/1 info:eu-repo/semantics/article info:ar-repo/semantics/artículo info:eu-repo/semantics/publishedVersion ftconicet https://doi.org/10.1007/S10530-018-1908-8 2023-09-24T20:20:17Z The ability to detect species at low densities, greatly improves the success of management action on alien invasive species and decreases their possible impact on ecosystems. In the last two decades, exotic Chinook salmon (Oncorhynchus tshawytscha) have established populations in both Pacific and Atlantic river basins of Patagonia. The last established populations have been reported in the extreme south of Patagonia, on the island of Tierra del Fuego (TDF). The relatively recent appearance of Chinook salmon in TDF and the great phenotypic plasticity of this species, make it necessary to study their distribution and expansion as soon as possible, since they have the potential to negatively impact on native ecosystems. With the objective of knowing the current distribution status of exotic Chinook salmon in TDF, we optimized and implemented a detection method based on environmental DNA (eDNA). First, we designed Chinook salmon-specific primers, with no cross-amplification, using DNA from other species that are living at the same environment. Second, we validated the primers in situ by detecting Chinook salmon DNA from natural environments at the same time that we performed a conventional survey using an electrofishing survey method. Finally, we collected water samples from 10 river basins and one estuary within TDF and one river basin from Isla de los Estados (IE) and performed single-species real-time PCR assays. We were able to detect Chinook salmon DNA from 5 basins and from the estuary in TDF. These eDNA-based results allowed us to confirm the expansion of exotic Chinook salmon since they were first reported in TDF. Fil: Nardi, Cristina Fernanda. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Austral de Investigaciones Científicas; Argentina. Universidad Nacional de Tierra del Fuego, Antártida e Islas del Atlántico Sur. Instituto de Ciencias Polares, Ambientales y Recursos Naturales; Argentina Fil: Fernandez, Daniel Alfredo. Consejo Nacional de Investigaciones Científicas y Técnicas. ... Article in Journal/Newspaper Antártida Tierra del Fuego CONICET Digital (Consejo Nacional de Investigaciones Científicas y Técnicas) Austral Patagonia Pacific Argentina Fernandez ENVELOPE(-62.233,-62.233,-63.250,-63.250) Biological Invasions 21 4 1415 1425
institution Open Polar
collection CONICET Digital (Consejo Nacional de Investigaciones Científicas y Técnicas)
op_collection_id ftconicet
language English
topic ALIEN INVASIVE SPECIES
EDNA
NON-NATIVE SPECIES
SALMONIDS
SOUTH AMERICA
TIERRA DEL FUEGO
https://purl.org/becyt/ford/1.6
https://purl.org/becyt/ford/1
spellingShingle ALIEN INVASIVE SPECIES
EDNA
NON-NATIVE SPECIES
SALMONIDS
SOUTH AMERICA
TIERRA DEL FUEGO
https://purl.org/becyt/ford/1.6
https://purl.org/becyt/ford/1
Nardi, Cristina Fernanda
Fernandez, Daniel Alfredo
Vanella, Fabián Alberto
Chalde, Tomás
The expansion of exotic Chinook salmon (Oncorhynchus tshawytscha) in the extreme south of Patagonia: an environmental DNA approach
topic_facet ALIEN INVASIVE SPECIES
EDNA
NON-NATIVE SPECIES
SALMONIDS
SOUTH AMERICA
TIERRA DEL FUEGO
https://purl.org/becyt/ford/1.6
https://purl.org/becyt/ford/1
description The ability to detect species at low densities, greatly improves the success of management action on alien invasive species and decreases their possible impact on ecosystems. In the last two decades, exotic Chinook salmon (Oncorhynchus tshawytscha) have established populations in both Pacific and Atlantic river basins of Patagonia. The last established populations have been reported in the extreme south of Patagonia, on the island of Tierra del Fuego (TDF). The relatively recent appearance of Chinook salmon in TDF and the great phenotypic plasticity of this species, make it necessary to study their distribution and expansion as soon as possible, since they have the potential to negatively impact on native ecosystems. With the objective of knowing the current distribution status of exotic Chinook salmon in TDF, we optimized and implemented a detection method based on environmental DNA (eDNA). First, we designed Chinook salmon-specific primers, with no cross-amplification, using DNA from other species that are living at the same environment. Second, we validated the primers in situ by detecting Chinook salmon DNA from natural environments at the same time that we performed a conventional survey using an electrofishing survey method. Finally, we collected water samples from 10 river basins and one estuary within TDF and one river basin from Isla de los Estados (IE) and performed single-species real-time PCR assays. We were able to detect Chinook salmon DNA from 5 basins and from the estuary in TDF. These eDNA-based results allowed us to confirm the expansion of exotic Chinook salmon since they were first reported in TDF. Fil: Nardi, Cristina Fernanda. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Austral de Investigaciones Científicas; Argentina. Universidad Nacional de Tierra del Fuego, Antártida e Islas del Atlántico Sur. Instituto de Ciencias Polares, Ambientales y Recursos Naturales; Argentina Fil: Fernandez, Daniel Alfredo. Consejo Nacional de Investigaciones Científicas y Técnicas. ...
format Article in Journal/Newspaper
author Nardi, Cristina Fernanda
Fernandez, Daniel Alfredo
Vanella, Fabián Alberto
Chalde, Tomás
author_facet Nardi, Cristina Fernanda
Fernandez, Daniel Alfredo
Vanella, Fabián Alberto
Chalde, Tomás
author_sort Nardi, Cristina Fernanda
title The expansion of exotic Chinook salmon (Oncorhynchus tshawytscha) in the extreme south of Patagonia: an environmental DNA approach
title_short The expansion of exotic Chinook salmon (Oncorhynchus tshawytscha) in the extreme south of Patagonia: an environmental DNA approach
title_full The expansion of exotic Chinook salmon (Oncorhynchus tshawytscha) in the extreme south of Patagonia: an environmental DNA approach
title_fullStr The expansion of exotic Chinook salmon (Oncorhynchus tshawytscha) in the extreme south of Patagonia: an environmental DNA approach
title_full_unstemmed The expansion of exotic Chinook salmon (Oncorhynchus tshawytscha) in the extreme south of Patagonia: an environmental DNA approach
title_sort expansion of exotic chinook salmon (oncorhynchus tshawytscha) in the extreme south of patagonia: an environmental dna approach
publisher Springer
url http://hdl.handle.net/11336/147676
long_lat ENVELOPE(-62.233,-62.233,-63.250,-63.250)
geographic Austral
Patagonia
Pacific
Argentina
Fernandez
geographic_facet Austral
Patagonia
Pacific
Argentina
Fernandez
genre Antártida
Tierra del Fuego
genre_facet Antártida
Tierra del Fuego
op_relation info:eu-repo/semantics/altIdentifier/url/https://link.springer.com/article/10.1007%2Fs10530-018-1908-8
info:eu-repo/semantics/altIdentifier/doi/10.1007/S10530-018-1908-8
http://hdl.handle.net/11336/147676
Nardi, Cristina Fernanda; Fernandez, Daniel Alfredo; Vanella, Fabián Alberto; Chalde, Tomás; The expansion of exotic Chinook salmon (Oncorhynchus tshawytscha) in the extreme south of Patagonia: an environmental DNA approach; Springer; Biological Invasions; 21; 4; 1-2019; 1415-1425
1387-3547
CONICET Digital
CONICET
op_rights info:eu-repo/semantics/openAccess
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
op_doi https://doi.org/10.1007/S10530-018-1908-8
container_title Biological Invasions
container_volume 21
container_issue 4
container_start_page 1415
op_container_end_page 1425
_version_ 1779310422174728192