Whole-genome duplications in South American desert rodents (Octodontidae)

The discovery of tetraploidy in the red viscacha rat, Tympanoctomys barrerae (4 n = 102) has emphasized the evolutionary role of genome duplication in mammals. The tetraploid status of this species is corroborated here by in situ PCR and Southern blot analysis of a single-copy gene. The species meio...

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Published in:Biological Journal of the Linnean Society
Main Authors: Gallardo Narcisi, Milton Hermes, Kausel, G., Jiménez, A., Bacquet, C., González, C., Figueroa, J., Köhler, N., Ojeda, Ricardo Alberto
Format: Article in Journal/Newspaper
Language:English
Published: Wiley Blackwell Publishing, Inc
Subjects:
Online Access:http://hdl.handle.net/11336/102012
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spelling ftconicet:oai:ri.conicet.gov.ar:11336/102012 2023-10-09T21:52:55+02:00 Whole-genome duplications in South American desert rodents (Octodontidae) Gallardo Narcisi, Milton Hermes Kausel, G. Jiménez, A. Bacquet, C. González, C. Figueroa, J. Köhler, N. Ojeda, Ricardo Alberto application/pdf http://hdl.handle.net/11336/102012 eng eng Wiley Blackwell Publishing, Inc info:eu-repo/semantics/altIdentifier/doi/10.1111/j.1095-8312.2004.00331.x info:eu-repo/semantics/altIdentifier/url/https://onlinelibrary.wiley.com/doi/abs/10.1111/j.1095-8312.2004.00331.x info:eu-repo/semantics/altIdentifier/url/https://academic.oup.com/biolinnean/article/82/4/443/2643076 http://hdl.handle.net/11336/102012 Gallardo Narcisi, Milton Hermes; Kausel, G.; Jiménez, A.; Bacquet, C.; González, C.; et al.; Whole-genome duplications in South American desert rodents (Octodontidae); Wiley Blackwell Publishing, Inc; Biological Journal of The Linnean Society; 82; 4; 8-2004; 443-451 0024-4066 CONICET Digital CONICET info:eu-repo/semantics/openAccess https://creativecommons.org/licenses/by-nc-sa/2.5/ar/ allotetraploidy hybridization octodontids polyploidy https://purl.org/becyt/ford/1.6 https://purl.org/becyt/ford/1 info:eu-repo/semantics/article info:ar-repo/semantics/artículo info:eu-repo/semantics/publishedVersion ftconicet https://doi.org/10.1111/j.1095-8312.2004.00331.x 2023-09-24T18:34:34Z The discovery of tetraploidy in the red viscacha rat, Tympanoctomys barrerae (4 n = 102) has emphasized the evolutionary role of genome duplication in mammals. The tetraploid status of this species is corroborated here by in situ PCR and Southern blot analysis of a single-copy gene. The species meiotic configuration strongly suggests a hybrid derivation. To investigate the origin of T. barrerae further, the recently described Pipanacoctomys aureus was studied. This 92-chromosome species also has a duplicated genome size, redundant gene copy number and diploid-like meiotic pairing, consistent with an event of allotetraploidization. Phylogenetic analysis of mitochondrial sequences indicates sister-group relationships between these two tetraploid rodents. The new karyotypic data and the phylogenetic relationships suggest the participation of the ancestral lineages of Octomys mimax in the genesis of P. aureus . The high overall DNA similarity and shared band homology revealed by genomic Southern hybridization as well as matching chromosome numbers between O. mimax and the descendant tetraploid species support the notion of introgressive hybridization between these taxa. Fil: Gallardo Narcisi, Milton Hermes. Universidad Austral de Chile; Chile Fil: Kausel, G. Universidad Austral de Chile; Chile Fil: Jiménez, A. Universidad Austral de Chile; Chile Fil: Bacquet, C. Universidad Austral de Chile; Chile Fil: González, C. Universidad Austral de Chile; Chile Fil: Figueroa, J. Universidad Austral de Chile; Chile Fil: Köhler, N. Universidad Austral de Chile; Chile Fil: Ojeda, Ricardo Alberto. Ministerio de Relaciones Exteriores, Comercio Internacional y Culto. Direccion Nacional del Antártico. Instituto Antártico Argentino. Instituto Antártico Argentino - Sede Cricyt (Mendoza); Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Mendoza. Instituto Argentino de Investigaciones de las Zonas Áridas. Provincia de Mendoza. Instituto Argentino de ... Article in Journal/Newspaper Instituto Antártico Argentino CONICET Digital (Consejo Nacional de Investigaciones Científicas y Técnicas) Austral Argentino Argentina Milton ENVELOPE(-84.800,-84.800,-78.800,-78.800) Ricardo ENVELOPE(-63.033,-63.033,-64.867,-64.867) Jiménez ENVELOPE(-68.083,-68.083,-67.567,-67.567) Figueroa ENVELOPE(-61.033,-61.033,-64.067,-64.067) Biological Journal of the Linnean Society 82 4 443 451
institution Open Polar
collection CONICET Digital (Consejo Nacional de Investigaciones Científicas y Técnicas)
op_collection_id ftconicet
language English
topic allotetraploidy
hybridization
octodontids
polyploidy
https://purl.org/becyt/ford/1.6
https://purl.org/becyt/ford/1
spellingShingle allotetraploidy
hybridization
octodontids
polyploidy
https://purl.org/becyt/ford/1.6
https://purl.org/becyt/ford/1
Gallardo Narcisi, Milton Hermes
Kausel, G.
Jiménez, A.
Bacquet, C.
González, C.
Figueroa, J.
Köhler, N.
Ojeda, Ricardo Alberto
Whole-genome duplications in South American desert rodents (Octodontidae)
topic_facet allotetraploidy
hybridization
octodontids
polyploidy
https://purl.org/becyt/ford/1.6
https://purl.org/becyt/ford/1
description The discovery of tetraploidy in the red viscacha rat, Tympanoctomys barrerae (4 n = 102) has emphasized the evolutionary role of genome duplication in mammals. The tetraploid status of this species is corroborated here by in situ PCR and Southern blot analysis of a single-copy gene. The species meiotic configuration strongly suggests a hybrid derivation. To investigate the origin of T. barrerae further, the recently described Pipanacoctomys aureus was studied. This 92-chromosome species also has a duplicated genome size, redundant gene copy number and diploid-like meiotic pairing, consistent with an event of allotetraploidization. Phylogenetic analysis of mitochondrial sequences indicates sister-group relationships between these two tetraploid rodents. The new karyotypic data and the phylogenetic relationships suggest the participation of the ancestral lineages of Octomys mimax in the genesis of P. aureus . The high overall DNA similarity and shared band homology revealed by genomic Southern hybridization as well as matching chromosome numbers between O. mimax and the descendant tetraploid species support the notion of introgressive hybridization between these taxa. Fil: Gallardo Narcisi, Milton Hermes. Universidad Austral de Chile; Chile Fil: Kausel, G. Universidad Austral de Chile; Chile Fil: Jiménez, A. Universidad Austral de Chile; Chile Fil: Bacquet, C. Universidad Austral de Chile; Chile Fil: González, C. Universidad Austral de Chile; Chile Fil: Figueroa, J. Universidad Austral de Chile; Chile Fil: Köhler, N. Universidad Austral de Chile; Chile Fil: Ojeda, Ricardo Alberto. Ministerio de Relaciones Exteriores, Comercio Internacional y Culto. Direccion Nacional del Antártico. Instituto Antártico Argentino. Instituto Antártico Argentino - Sede Cricyt (Mendoza); Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Mendoza. Instituto Argentino de Investigaciones de las Zonas Áridas. Provincia de Mendoza. Instituto Argentino de ...
format Article in Journal/Newspaper
author Gallardo Narcisi, Milton Hermes
Kausel, G.
Jiménez, A.
Bacquet, C.
González, C.
Figueroa, J.
Köhler, N.
Ojeda, Ricardo Alberto
author_facet Gallardo Narcisi, Milton Hermes
Kausel, G.
Jiménez, A.
Bacquet, C.
González, C.
Figueroa, J.
Köhler, N.
Ojeda, Ricardo Alberto
author_sort Gallardo Narcisi, Milton Hermes
title Whole-genome duplications in South American desert rodents (Octodontidae)
title_short Whole-genome duplications in South American desert rodents (Octodontidae)
title_full Whole-genome duplications in South American desert rodents (Octodontidae)
title_fullStr Whole-genome duplications in South American desert rodents (Octodontidae)
title_full_unstemmed Whole-genome duplications in South American desert rodents (Octodontidae)
title_sort whole-genome duplications in south american desert rodents (octodontidae)
publisher Wiley Blackwell Publishing, Inc
url http://hdl.handle.net/11336/102012
long_lat ENVELOPE(-84.800,-84.800,-78.800,-78.800)
ENVELOPE(-63.033,-63.033,-64.867,-64.867)
ENVELOPE(-68.083,-68.083,-67.567,-67.567)
ENVELOPE(-61.033,-61.033,-64.067,-64.067)
geographic Austral
Argentino
Argentina
Milton
Ricardo
Jiménez
Figueroa
geographic_facet Austral
Argentino
Argentina
Milton
Ricardo
Jiménez
Figueroa
genre Instituto Antártico Argentino
genre_facet Instituto Antártico Argentino
op_relation info:eu-repo/semantics/altIdentifier/doi/10.1111/j.1095-8312.2004.00331.x
info:eu-repo/semantics/altIdentifier/url/https://onlinelibrary.wiley.com/doi/abs/10.1111/j.1095-8312.2004.00331.x
info:eu-repo/semantics/altIdentifier/url/https://academic.oup.com/biolinnean/article/82/4/443/2643076
http://hdl.handle.net/11336/102012
Gallardo Narcisi, Milton Hermes; Kausel, G.; Jiménez, A.; Bacquet, C.; González, C.; et al.; Whole-genome duplications in South American desert rodents (Octodontidae); Wiley Blackwell Publishing, Inc; Biological Journal of The Linnean Society; 82; 4; 8-2004; 443-451
0024-4066
CONICET Digital
CONICET
op_rights info:eu-repo/semantics/openAccess
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container_title Biological Journal of the Linnean Society
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