The marine viromes of four oceanic regions

Viruses are the most common biological entities in the marine environment. There has not been a global survey of these viruses, and consequently, it is not known what types of viruses are in Earth’s oceans or how they are distributed. Metagenomic analyses of 184 viral assemblages collected over a de...

Full description

Bibliographic Details
Main Authors: Florent E. Angly, Ben Felts, Mya Breitbart, Peter Salamon, Robert A. Edwards, Craig Carlson, Amy M. Chan, Matthew Haynes, Scott Kelley, Hong Liu, Joseph M. Mahaffy, Jennifer E. Mueller, Jim Nulton, Robert Olson, Rachel Parsons, Steve Rayhawk, Curtis A. Suttle, Forest Rohwer
Other Authors: The Pennsylvania State University CiteSeerX Archives
Format: Text
Language:English
Published: 2006
Subjects:
Online Access:http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.585.9325
http://openwetware.org/images/a/a1/DeLongLab_NERD_Angly_etal_2006.pdf
id ftciteseerx:oai:CiteSeerX.psu:10.1.1.585.9325
record_format openpolar
spelling ftciteseerx:oai:CiteSeerX.psu:10.1.1.585.9325 2023-05-15T15:04:21+02:00 The marine viromes of four oceanic regions Florent E. Angly Ben Felts Mya Breitbart Peter Salamon Robert A. Edwards Craig Carlson Amy M. Chan Matthew Haynes Scott Kelley Hong Liu Joseph M. Mahaffy Jennifer E. Mueller Jim Nulton Robert Olson Rachel Parsons Steve Rayhawk Curtis A. Suttle Forest Rohwer The Pennsylvania State University CiteSeerX Archives 2006 application/pdf http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.585.9325 http://openwetware.org/images/a/a1/DeLongLab_NERD_Angly_etal_2006.pdf en eng http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.585.9325 http://openwetware.org/images/a/a1/DeLongLab_NERD_Angly_etal_2006.pdf Metadata may be used without restrictions as long as the oai identifier remains attached to it. http://openwetware.org/images/a/a1/DeLongLab_NERD_Angly_etal_2006.pdf text 2006 ftciteseerx 2016-01-08T13:15:52Z Viruses are the most common biological entities in the marine environment. There has not been a global survey of these viruses, and consequently, it is not known what types of viruses are in Earth’s oceans or how they are distributed. Metagenomic analyses of 184 viral assemblages collected over a decade and representing 68 sites in four major oceanic regions showed that most of the viral sequences were not similar to those in the current databases. There was a distinct ‘‘marine-ness’ ’ quality to the viral assemblages. Global diversity was very high, presumably several hundred thousand of species, and regional richness varied on a North-South latitudinal gradient. The marine regions had different assemblages of viruses. Cyanophages and a newly discovered clade of single-stranded DNA phages dominated the Sargasso Sea sample, whereas prophage-like sequences were most common in the Arctic. However most viral species were found to be widespread. With a majority of shared species between oceanic regions, most of Text Arctic Unknown Arctic
institution Open Polar
collection Unknown
op_collection_id ftciteseerx
language English
description Viruses are the most common biological entities in the marine environment. There has not been a global survey of these viruses, and consequently, it is not known what types of viruses are in Earth’s oceans or how they are distributed. Metagenomic analyses of 184 viral assemblages collected over a decade and representing 68 sites in four major oceanic regions showed that most of the viral sequences were not similar to those in the current databases. There was a distinct ‘‘marine-ness’ ’ quality to the viral assemblages. Global diversity was very high, presumably several hundred thousand of species, and regional richness varied on a North-South latitudinal gradient. The marine regions had different assemblages of viruses. Cyanophages and a newly discovered clade of single-stranded DNA phages dominated the Sargasso Sea sample, whereas prophage-like sequences were most common in the Arctic. However most viral species were found to be widespread. With a majority of shared species between oceanic regions, most of
author2 The Pennsylvania State University CiteSeerX Archives
format Text
author Florent E. Angly
Ben Felts
Mya Breitbart
Peter Salamon
Robert A. Edwards
Craig Carlson
Amy M. Chan
Matthew Haynes
Scott Kelley
Hong Liu
Joseph M. Mahaffy
Jennifer E. Mueller
Jim Nulton
Robert Olson
Rachel Parsons
Steve Rayhawk
Curtis A. Suttle
Forest Rohwer
spellingShingle Florent E. Angly
Ben Felts
Mya Breitbart
Peter Salamon
Robert A. Edwards
Craig Carlson
Amy M. Chan
Matthew Haynes
Scott Kelley
Hong Liu
Joseph M. Mahaffy
Jennifer E. Mueller
Jim Nulton
Robert Olson
Rachel Parsons
Steve Rayhawk
Curtis A. Suttle
Forest Rohwer
The marine viromes of four oceanic regions
author_facet Florent E. Angly
Ben Felts
Mya Breitbart
Peter Salamon
Robert A. Edwards
Craig Carlson
Amy M. Chan
Matthew Haynes
Scott Kelley
Hong Liu
Joseph M. Mahaffy
Jennifer E. Mueller
Jim Nulton
Robert Olson
Rachel Parsons
Steve Rayhawk
Curtis A. Suttle
Forest Rohwer
author_sort Florent E. Angly
title The marine viromes of four oceanic regions
title_short The marine viromes of four oceanic regions
title_full The marine viromes of four oceanic regions
title_fullStr The marine viromes of four oceanic regions
title_full_unstemmed The marine viromes of four oceanic regions
title_sort marine viromes of four oceanic regions
publishDate 2006
url http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.585.9325
http://openwetware.org/images/a/a1/DeLongLab_NERD_Angly_etal_2006.pdf
geographic Arctic
geographic_facet Arctic
genre Arctic
genre_facet Arctic
op_source http://openwetware.org/images/a/a1/DeLongLab_NERD_Angly_etal_2006.pdf
op_relation http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.585.9325
http://openwetware.org/images/a/a1/DeLongLab_NERD_Angly_etal_2006.pdf
op_rights Metadata may be used without restrictions as long as the oai identifier remains attached to it.
_version_ 1766336143084748800