Evolution of Microsatellite Loci of Tropical and Temperate Anguilla Eels

Abstract: Anguilla eels are divided into temperate and tropical eels, based on their major distributions. The present study collected two temperate eels, Anguilla japonica and Anguilla anguilla, and two tropical eels, Anguilla marmorata and Anguilla bicolor pacifica, to examine two questions: do tem...

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Main Author: Mei-chen Tseng
Other Authors: The Pennsylvania State University CiteSeerX Archives
Format: Text
Language:English
Published: 2012
Subjects:
Online Access:http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.391.9600
http://www.mdpi.com/1422-0067/13/4/4281/pdf/
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spelling ftciteseerx:oai:CiteSeerX.psu:10.1.1.391.9600 2023-05-15T13:26:27+02:00 Evolution of Microsatellite Loci of Tropical and Temperate Anguilla Eels Mei-chen Tseng The Pennsylvania State University CiteSeerX Archives 2012 http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.391.9600 http://www.mdpi.com/1422-0067/13/4/4281/pdf/ en eng http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.391.9600 http://www.mdpi.com/1422-0067/13/4/4281/pdf/ Metadata may be used without restrictions as long as the oai identifier remains attached to it. http://www.mdpi.com/1422-0067/13/4/4281/pdf/ flanking sequence major region polymorphic patternInt. J. Mol. Sci. 2012 13 4282 text 2012 ftciteseerx 2016-01-08T02:17:57Z Abstract: Anguilla eels are divided into temperate and tropical eels, based on their major distributions. The present study collected two temperate eels, Anguilla japonica and Anguilla anguilla, and two tropical eels, Anguilla marmorata and Anguilla bicolor pacifica, to examine two questions: do temperate and tropical Anguilla eels have different genetic polymorphic patterns?; and do temperate Anguilla japonica and Anguilla anguilla have a closer relationship to each other than to tropical eels? In total, 274 sequences were cloned and sequenced from six conserved microsatellite loci to examine polymorphic patterns of these four catadromous eels. Different mutational events, including substitutions, and repeat-unit deletions and insertions, appeared in major regions, while different point mutations were observed in flanking regions. The results implied that parallel patterns of microsatellite sequences occurred within both tropical and temperate freshwater eels. Consensus flanking sequences of six homologous loci from each of the four species were constructed. Genetic distances ranged from 0.044 (Anguilla bicolor pacifica vs. Anguilla marmorata) to 0.061 (Anguilla marmorata vs. Anguilla anguilla). The tree topology suggests the hypothesis of Anguilla japonica and Anguilla anguilla being a sister group must be rejected. Text Anguilla anguilla Unknown
institution Open Polar
collection Unknown
op_collection_id ftciteseerx
language English
topic flanking sequence
major region
polymorphic patternInt. J. Mol. Sci. 2012
13 4282
spellingShingle flanking sequence
major region
polymorphic patternInt. J. Mol. Sci. 2012
13 4282
Mei-chen Tseng
Evolution of Microsatellite Loci of Tropical and Temperate Anguilla Eels
topic_facet flanking sequence
major region
polymorphic patternInt. J. Mol. Sci. 2012
13 4282
description Abstract: Anguilla eels are divided into temperate and tropical eels, based on their major distributions. The present study collected two temperate eels, Anguilla japonica and Anguilla anguilla, and two tropical eels, Anguilla marmorata and Anguilla bicolor pacifica, to examine two questions: do temperate and tropical Anguilla eels have different genetic polymorphic patterns?; and do temperate Anguilla japonica and Anguilla anguilla have a closer relationship to each other than to tropical eels? In total, 274 sequences were cloned and sequenced from six conserved microsatellite loci to examine polymorphic patterns of these four catadromous eels. Different mutational events, including substitutions, and repeat-unit deletions and insertions, appeared in major regions, while different point mutations were observed in flanking regions. The results implied that parallel patterns of microsatellite sequences occurred within both tropical and temperate freshwater eels. Consensus flanking sequences of six homologous loci from each of the four species were constructed. Genetic distances ranged from 0.044 (Anguilla bicolor pacifica vs. Anguilla marmorata) to 0.061 (Anguilla marmorata vs. Anguilla anguilla). The tree topology suggests the hypothesis of Anguilla japonica and Anguilla anguilla being a sister group must be rejected.
author2 The Pennsylvania State University CiteSeerX Archives
format Text
author Mei-chen Tseng
author_facet Mei-chen Tseng
author_sort Mei-chen Tseng
title Evolution of Microsatellite Loci of Tropical and Temperate Anguilla Eels
title_short Evolution of Microsatellite Loci of Tropical and Temperate Anguilla Eels
title_full Evolution of Microsatellite Loci of Tropical and Temperate Anguilla Eels
title_fullStr Evolution of Microsatellite Loci of Tropical and Temperate Anguilla Eels
title_full_unstemmed Evolution of Microsatellite Loci of Tropical and Temperate Anguilla Eels
title_sort evolution of microsatellite loci of tropical and temperate anguilla eels
publishDate 2012
url http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.391.9600
http://www.mdpi.com/1422-0067/13/4/4281/pdf/
genre Anguilla anguilla
genre_facet Anguilla anguilla
op_source http://www.mdpi.com/1422-0067/13/4/4281/pdf/
op_relation http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.391.9600
http://www.mdpi.com/1422-0067/13/4/4281/pdf/
op_rights Metadata may be used without restrictions as long as the oai identifier remains attached to it.
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