DOI:10.4056.sigs46736 Complete genome sequence of Rhodothermus marinus type strain (R-10 T)

Rhodothermus marinus Alfredsson et al. 1995 is the type species of the genus and is of phylogenetic interest because the Rhodothermaceae represent the deepest lineage in the phylum Bacteroidetes. R. marinus R-10 T is a Gram-negative, non-motile, non-spore-forming bacterium isolated from marine hot s...

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Main Authors: Matt Nolan, Brian J. Tindall, Helga Pomrenke, Alla Lapidus, Alex Copel, Glavina Del Rio, Susan Lucas, Feng Chen, Hope Tice, Jan-fang Cheng, Cliff Han, David Bruce, Lynne Goodwin, Patrick Chain, Sam Pitluck, Galina Ovchinikova, Amrita Pati, Natalia Ivanova, Konstantinos Mavromatis, Amy Chen, Miriam L, Loren Hauser, Yun-juan Chang, Cynthia D, Thomas Brettin, Markus Göker, James Bristow, Jonathan A. Eisen, Philip Hugenholtz, Nikos C. Kyrpides, Hans-peter Klenk, John C
Other Authors: The Pennsylvania State University CiteSeerX Archives
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Language:English
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Online Access:http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.293.5371
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spelling ftciteseerx:oai:CiteSeerX.psu:10.1.1.293.5371 2023-05-15T16:49:27+02:00 DOI:10.4056.sigs46736 Complete genome sequence of Rhodothermus marinus type strain (R-10 T) Matt Nolan Brian J. Tindall Helga Pomrenke Alla Lapidus Alex Copel Glavina Del Rio Susan Lucas Feng Chen Hope Tice Jan-fang Cheng Cliff Han David Bruce Lynne Goodwin Patrick Chain Sam Pitluck Galina Ovchinikova Amrita Pati Natalia Ivanova Konstantinos Mavromatis Amy Chen Miriam L Loren Hauser Yun-juan Chang Cynthia D Thomas Brettin Markus Göker James Bristow Jonathan A. Eisen Philip Hugenholtz Nikos C. Kyrpides Hans-peter Klenk John C The Pennsylvania State University CiteSeerX Archives application/zip http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.293.5371 en eng http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.293.5371 Metadata may be used without restrictions as long as the oai identifier remains attached to it. ftp://ftp.ncbi.nlm.nih.gov/pub/pmc/b4/53/Stand_Genomic_Sci_2009_Dec_29_1(3)_283-290.tar.gz thermophile alkaliphile nonmotile non-sporulating aerobic heterotroph Sphingobacteriales text ftciteseerx 2016-01-07T21:40:59Z Rhodothermus marinus Alfredsson et al. 1995 is the type species of the genus and is of phylogenetic interest because the Rhodothermaceae represent the deepest lineage in the phylum Bacteroidetes. R. marinus R-10 T is a Gram-negative, non-motile, non-spore-forming bacterium isolated from marine hot springs off the coast of Iceland. Strain R-10 T is strictly aerobic and requires slightly halophilic conditions for growth. Here we describe the features of this organism, together with the complete genome sequence, and annotation. This is the first complete genome sequence of the genus Rhodothermus, and only the second sequence from members of the family Rhodothermaceae. The 3,386,737 bp genome (including a 125 kb plasmid) with its 2914 protein-coding and 48 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project. Text Iceland Unknown
institution Open Polar
collection Unknown
op_collection_id ftciteseerx
language English
topic thermophile
alkaliphile
nonmotile
non-sporulating
aerobic
heterotroph
Sphingobacteriales
spellingShingle thermophile
alkaliphile
nonmotile
non-sporulating
aerobic
heterotroph
Sphingobacteriales
Matt Nolan
Brian J. Tindall
Helga Pomrenke
Alla Lapidus
Alex Copel
Glavina Del Rio
Susan Lucas
Feng Chen
Hope Tice
Jan-fang Cheng
Cliff Han
David Bruce
Lynne Goodwin
Patrick Chain
Sam Pitluck
Galina Ovchinikova
Amrita Pati
Natalia Ivanova
Konstantinos Mavromatis
Amy Chen
Miriam L
Loren Hauser
Yun-juan Chang
Cynthia D
Thomas Brettin
Markus Göker
James Bristow
Jonathan A. Eisen
Philip Hugenholtz
Nikos C. Kyrpides
Hans-peter Klenk
John C
DOI:10.4056.sigs46736 Complete genome sequence of Rhodothermus marinus type strain (R-10 T)
topic_facet thermophile
alkaliphile
nonmotile
non-sporulating
aerobic
heterotroph
Sphingobacteriales
description Rhodothermus marinus Alfredsson et al. 1995 is the type species of the genus and is of phylogenetic interest because the Rhodothermaceae represent the deepest lineage in the phylum Bacteroidetes. R. marinus R-10 T is a Gram-negative, non-motile, non-spore-forming bacterium isolated from marine hot springs off the coast of Iceland. Strain R-10 T is strictly aerobic and requires slightly halophilic conditions for growth. Here we describe the features of this organism, together with the complete genome sequence, and annotation. This is the first complete genome sequence of the genus Rhodothermus, and only the second sequence from members of the family Rhodothermaceae. The 3,386,737 bp genome (including a 125 kb plasmid) with its 2914 protein-coding and 48 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.
author2 The Pennsylvania State University CiteSeerX Archives
format Text
author Matt Nolan
Brian J. Tindall
Helga Pomrenke
Alla Lapidus
Alex Copel
Glavina Del Rio
Susan Lucas
Feng Chen
Hope Tice
Jan-fang Cheng
Cliff Han
David Bruce
Lynne Goodwin
Patrick Chain
Sam Pitluck
Galina Ovchinikova
Amrita Pati
Natalia Ivanova
Konstantinos Mavromatis
Amy Chen
Miriam L
Loren Hauser
Yun-juan Chang
Cynthia D
Thomas Brettin
Markus Göker
James Bristow
Jonathan A. Eisen
Philip Hugenholtz
Nikos C. Kyrpides
Hans-peter Klenk
John C
author_facet Matt Nolan
Brian J. Tindall
Helga Pomrenke
Alla Lapidus
Alex Copel
Glavina Del Rio
Susan Lucas
Feng Chen
Hope Tice
Jan-fang Cheng
Cliff Han
David Bruce
Lynne Goodwin
Patrick Chain
Sam Pitluck
Galina Ovchinikova
Amrita Pati
Natalia Ivanova
Konstantinos Mavromatis
Amy Chen
Miriam L
Loren Hauser
Yun-juan Chang
Cynthia D
Thomas Brettin
Markus Göker
James Bristow
Jonathan A. Eisen
Philip Hugenholtz
Nikos C. Kyrpides
Hans-peter Klenk
John C
author_sort Matt Nolan
title DOI:10.4056.sigs46736 Complete genome sequence of Rhodothermus marinus type strain (R-10 T)
title_short DOI:10.4056.sigs46736 Complete genome sequence of Rhodothermus marinus type strain (R-10 T)
title_full DOI:10.4056.sigs46736 Complete genome sequence of Rhodothermus marinus type strain (R-10 T)
title_fullStr DOI:10.4056.sigs46736 Complete genome sequence of Rhodothermus marinus type strain (R-10 T)
title_full_unstemmed DOI:10.4056.sigs46736 Complete genome sequence of Rhodothermus marinus type strain (R-10 T)
title_sort doi:10.4056.sigs46736 complete genome sequence of rhodothermus marinus type strain (r-10 t)
url http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.293.5371
genre Iceland
genre_facet Iceland
op_source ftp://ftp.ncbi.nlm.nih.gov/pub/pmc/b4/53/Stand_Genomic_Sci_2009_Dec_29_1(3)_283-290.tar.gz
op_relation http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.293.5371
op_rights Metadata may be used without restrictions as long as the oai identifier remains attached to it.
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