Differential immune gene expression associated with contemporary range expansion of two invasive rodents in Senegal

This preprint has been reviewed and recommended by Peer Community in Ecology. International audience Biological invasions are major anthropogenic changes associated with threats to biodiversity and health. However, what determines the successful establishment and spread of introduced populations rem...

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Main Authors: Charbonnel, Nathalie, Galan, Maxime, Tatard, Caroline, Loiseau, Anne, Diagne, Christophe Amidi, Dalecky, Ambroise, Parrinello, Hugues, Rialle, Stéphanie, Severac, Dany, Brouat, Carine
Other Authors: Centre de Biologie pour la Gestion des Populations (UMR CBGP), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Université de Montpellier (UM)-Institut de Recherche pour le Développement (IRD France-Sud )-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Institut Agro - Montpellier SupAgro, Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro), Université Cheikh Anta Diop de Dakar Sénégal (UCAD), Laboratoire Population-Environnement-Développement (LPED), Institut de Recherche pour le Développement (IRD)-Aix Marseille Université (AMU), Institut de Génomique Fonctionnelle - Montpellier GenomiX (IGF MGX), Institut de Génomique Fonctionnelle (IGF), Institut National de la Santé et de la Recherche Médicale (INSERM)-Université de Montpellier (UM)-Centre National de la Recherche Scientifique (CNRS)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Université de Montpellier (UM)-Centre National de la Recherche Scientifique (CNRS)-BioCampus (BCM), Institut National de la Santé et de la Recherche Médicale (INSERM)-Université de Montpellier (UM)-Centre National de la Recherche Scientifique (CNRS)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS), This work was supported by the ANR ENEMI project (ANR-11-JSV7-0006), and by the French Embassy in Senegal, which provided the funding for PhD scholarships., ANR-11-JSV7-0006,ENEMI,Conséquences évolutives des ennemis naturels dans des invasions biologiques majeures : le rôle des parasites dans le succès de l'invasion de deux rongeurs commensaux(2011)
Format: Article in Journal/Newspaper
Language:English
Published: HAL CCSD 2020
Subjects:
Online Access:https://hal.inrae.fr/hal-02790736
https://hal.inrae.fr/hal-02790736v2/document
https://hal.inrae.fr/hal-02790736v2/file/s41598-020-75060-2.pdf
https://doi.org/10.1101/442160
id ftciradhal:oai:HAL:hal-02790736v2
record_format openpolar
institution Open Polar
collection CIRAD: HAL (Agricultural Research for Development)
op_collection_id ftciradhal
language English
topic [SDV.BA]Life Sciences [q-bio]/Animal biology
spellingShingle [SDV.BA]Life Sciences [q-bio]/Animal biology
Charbonnel, Nathalie
Galan, Maxime
Tatard, Caroline
Loiseau, Anne
Diagne, Christophe Amidi
Dalecky, Ambroise
Parrinello, Hugues
Rialle, Stéphanie
Severac, Dany
Brouat, Carine
Differential immune gene expression associated with contemporary range expansion of two invasive rodents in Senegal
topic_facet [SDV.BA]Life Sciences [q-bio]/Animal biology
description This preprint has been reviewed and recommended by Peer Community in Ecology. International audience Biological invasions are major anthropogenic changes associated with threats to biodiversity and health. However, what determines the successful establishment and spread of introduced populations remains unclear. Here, we explore several hypotheses linking invasion success and immune phenotype traits, including those based on the evolution of increased competitive ability concept. We compared gene expression profiles between anciently and recently established populations of two major invading species, the house mouse Mus musculus domesticus and the black rat Rattus rattus, in Senegal (West Africa). Transcriptome analyses identified differential expression between anciently and recently established populations for 364 mouse genes and 83 rat genes. All immune-related genes displaying differential expression along the mouse invasion route were overexpressed at three of the four recently invaded sites studied. Complement activation pathway genes were overrepresented among these genes. By contrast, no particular immunological process was found to be overrepresented among the differentially expressed genes of black rat. Changes in transcriptome profiles were thus observed along invasion routes, but with different specific patterns between the two invasive species. These changes may be driven by increases in infection risks at sites recently invaded by the house mouse, and by stochastic events associated with colonization history for the black rat. These results constitute a first step toward the identification of immune eco-evolutionary processes potentially involved in the invasion success of these two rodent species.
author2 Centre de Biologie pour la Gestion des Populations (UMR CBGP)
Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Université de Montpellier (UM)-Institut de Recherche pour le Développement (IRD France-Sud )-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Institut Agro - Montpellier SupAgro
Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)
Université Cheikh Anta Diop de Dakar Sénégal (UCAD)
Laboratoire Population-Environnement-Développement (LPED)
Institut de Recherche pour le Développement (IRD)-Aix Marseille Université (AMU)
Institut de Génomique Fonctionnelle - Montpellier GenomiX (IGF MGX)
Institut de Génomique Fonctionnelle (IGF)
Institut National de la Santé et de la Recherche Médicale (INSERM)-Université de Montpellier (UM)-Centre National de la Recherche Scientifique (CNRS)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Université de Montpellier (UM)-Centre National de la Recherche Scientifique (CNRS)-BioCampus (BCM)
Institut National de la Santé et de la Recherche Médicale (INSERM)-Université de Montpellier (UM)-Centre National de la Recherche Scientifique (CNRS)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)
This work was supported by the ANR ENEMI project (ANR-11-JSV7-0006), and by the French Embassy in Senegal, which provided the funding for PhD scholarships.
ANR-11-JSV7-0006,ENEMI,Conséquences évolutives des ennemis naturels dans des invasions biologiques majeures : le rôle des parasites dans le succès de l'invasion de deux rongeurs commensaux(2011)
format Article in Journal/Newspaper
author Charbonnel, Nathalie
Galan, Maxime
Tatard, Caroline
Loiseau, Anne
Diagne, Christophe Amidi
Dalecky, Ambroise
Parrinello, Hugues
Rialle, Stéphanie
Severac, Dany
Brouat, Carine
author_facet Charbonnel, Nathalie
Galan, Maxime
Tatard, Caroline
Loiseau, Anne
Diagne, Christophe Amidi
Dalecky, Ambroise
Parrinello, Hugues
Rialle, Stéphanie
Severac, Dany
Brouat, Carine
author_sort Charbonnel, Nathalie
title Differential immune gene expression associated with contemporary range expansion of two invasive rodents in Senegal
title_short Differential immune gene expression associated with contemporary range expansion of two invasive rodents in Senegal
title_full Differential immune gene expression associated with contemporary range expansion of two invasive rodents in Senegal
title_fullStr Differential immune gene expression associated with contemporary range expansion of two invasive rodents in Senegal
title_full_unstemmed Differential immune gene expression associated with contemporary range expansion of two invasive rodents in Senegal
title_sort differential immune gene expression associated with contemporary range expansion of two invasive rodents in senegal
publisher HAL CCSD
publishDate 2020
url https://hal.inrae.fr/hal-02790736
https://hal.inrae.fr/hal-02790736v2/document
https://hal.inrae.fr/hal-02790736v2/file/s41598-020-75060-2.pdf
https://doi.org/10.1101/442160
genre Rattus rattus
genre_facet Rattus rattus
op_source ISSN: 2045-2322
EISSN: 2045-2322
Scientific Reports
https://hal.inrae.fr/hal-02790736
Scientific Reports, 2020, Peer Community in Ecology, 10, pp.18257. ⟨10.1101/442160⟩
https://www.nature.com/articles/s41598-020-75060-2.pdf
op_relation info:eu-repo/semantics/altIdentifier/doi/10.1101/442160
info:eu-repo/semantics/altIdentifier/pmid/33106535
hal-02790736
https://hal.inrae.fr/hal-02790736
https://hal.inrae.fr/hal-02790736v2/document
https://hal.inrae.fr/hal-02790736v2/file/s41598-020-75060-2.pdf
doi:10.1101/442160
PUBMED: 33106535
WOS: 000615370300012
op_rights http://creativecommons.org/licenses/by/
info:eu-repo/semantics/OpenAccess
op_doi https://doi.org/10.1101/442160
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spelling ftciradhal:oai:HAL:hal-02790736v2 2024-01-14T10:10:10+01:00 Differential immune gene expression associated with contemporary range expansion of two invasive rodents in Senegal Charbonnel, Nathalie Galan, Maxime Tatard, Caroline Loiseau, Anne Diagne, Christophe Amidi Dalecky, Ambroise Parrinello, Hugues Rialle, Stéphanie Severac, Dany Brouat, Carine Centre de Biologie pour la Gestion des Populations (UMR CBGP) Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Université de Montpellier (UM)-Institut de Recherche pour le Développement (IRD France-Sud )-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Institut Agro - Montpellier SupAgro Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro) Université Cheikh Anta Diop de Dakar Sénégal (UCAD) Laboratoire Population-Environnement-Développement (LPED) Institut de Recherche pour le Développement (IRD)-Aix Marseille Université (AMU) Institut de Génomique Fonctionnelle - Montpellier GenomiX (IGF MGX) Institut de Génomique Fonctionnelle (IGF) Institut National de la Santé et de la Recherche Médicale (INSERM)-Université de Montpellier (UM)-Centre National de la Recherche Scientifique (CNRS)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Université de Montpellier (UM)-Centre National de la Recherche Scientifique (CNRS)-BioCampus (BCM) Institut National de la Santé et de la Recherche Médicale (INSERM)-Université de Montpellier (UM)-Centre National de la Recherche Scientifique (CNRS)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS) This work was supported by the ANR ENEMI project (ANR-11-JSV7-0006), and by the French Embassy in Senegal, which provided the funding for PhD scholarships. ANR-11-JSV7-0006,ENEMI,Conséquences évolutives des ennemis naturels dans des invasions biologiques majeures : le rôle des parasites dans le succès de l'invasion de deux rongeurs commensaux(2011) 2020-10-26 https://hal.inrae.fr/hal-02790736 https://hal.inrae.fr/hal-02790736v2/document https://hal.inrae.fr/hal-02790736v2/file/s41598-020-75060-2.pdf https://doi.org/10.1101/442160 en eng HAL CCSD Nature Publishing Group info:eu-repo/semantics/altIdentifier/doi/10.1101/442160 info:eu-repo/semantics/altIdentifier/pmid/33106535 hal-02790736 https://hal.inrae.fr/hal-02790736 https://hal.inrae.fr/hal-02790736v2/document https://hal.inrae.fr/hal-02790736v2/file/s41598-020-75060-2.pdf doi:10.1101/442160 PUBMED: 33106535 WOS: 000615370300012 http://creativecommons.org/licenses/by/ info:eu-repo/semantics/OpenAccess ISSN: 2045-2322 EISSN: 2045-2322 Scientific Reports https://hal.inrae.fr/hal-02790736 Scientific Reports, 2020, Peer Community in Ecology, 10, pp.18257. ⟨10.1101/442160⟩ https://www.nature.com/articles/s41598-020-75060-2.pdf [SDV.BA]Life Sciences [q-bio]/Animal biology info:eu-repo/semantics/article Journal articles 2020 ftciradhal https://doi.org/10.1101/442160 2023-12-20T17:28:22Z This preprint has been reviewed and recommended by Peer Community in Ecology. International audience Biological invasions are major anthropogenic changes associated with threats to biodiversity and health. However, what determines the successful establishment and spread of introduced populations remains unclear. Here, we explore several hypotheses linking invasion success and immune phenotype traits, including those based on the evolution of increased competitive ability concept. We compared gene expression profiles between anciently and recently established populations of two major invading species, the house mouse Mus musculus domesticus and the black rat Rattus rattus, in Senegal (West Africa). Transcriptome analyses identified differential expression between anciently and recently established populations for 364 mouse genes and 83 rat genes. All immune-related genes displaying differential expression along the mouse invasion route were overexpressed at three of the four recently invaded sites studied. Complement activation pathway genes were overrepresented among these genes. By contrast, no particular immunological process was found to be overrepresented among the differentially expressed genes of black rat. Changes in transcriptome profiles were thus observed along invasion routes, but with different specific patterns between the two invasive species. These changes may be driven by increases in infection risks at sites recently invaded by the house mouse, and by stochastic events associated with colonization history for the black rat. These results constitute a first step toward the identification of immune eco-evolutionary processes potentially involved in the invasion success of these two rodent species. Article in Journal/Newspaper Rattus rattus CIRAD: HAL (Agricultural Research for Development)