Molecular genetic diversity of Gongylonema neoplasticum (Fibiger & Ditlevsen, 1914) (Spirurida: Gongylonematidae) from rodents in Southeast Asia
International audience More than a dozen Gongylonema spp. (Spirurida: Spiruroidea: Gongylonematidae) have been described from a variety of rodent hosts worldwide. Gongylonema neoplasticum (Fibiger & Ditlevsen, 1914), which dwells in the gastric mucosa of rats such as Rattus norvegicus (Berkenhou...
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ftciradhal:oai:HAL:hal-02394770v1 2024-06-09T07:49:14+00:00 Molecular genetic diversity of Gongylonema neoplasticum (Fibiger & Ditlevsen, 1914) (Spirurida: Gongylonematidae) from rodents in Southeast Asia Setsuda, Aogu Ribas, Alexis Chaisiri, Kittipong Morand, Serge Chou, Monidarin Malbas, Fidelino Yunus, Muchammad Sato, Hiroshi Yamaguchi University Yamaguchi University of Barcelona Mahidol University Bangkok Animal, Santé, Territoires, Risques et Ecosystèmes (UMR ASTRE) Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut National de la Recherche Agronomique (INRA) Laboratoire Rodolphe Mérieux Faculté de Pharmacie, Université des Sciences de la Santé Research Institute for Tropical Medicine Muntinlupa City, Philippines Airlangga University JSPS KAKENHI grants 15K07722, 15H05261 Heiwa Nakajima Foundation 2018-03 https://hal.science/hal-02394770 https://doi.org/10.1007/s11230-018-9778-0 en eng HAL CCSD Springer Verlag (Germany) info:eu-repo/semantics/altIdentifier/doi/10.1007/s11230-018-9778-0 info:eu-repo/semantics/altIdentifier/pmid/29446034 hal-02394770 https://hal.science/hal-02394770 doi:10.1007/s11230-018-9778-0 PRODINRA: 424390 PUBMED: 29446034 WOS: 000426077500008 ISSN: 0165-5752 EISSN: 1573-5192 Systematic Parasitology https://hal.science/hal-02394770 Systematic Parasitology, 2018, 95 (2-3), pp.235-247. ⟨10.1007/s11230-018-9778-0⟩ [SDV.BID.SPT]Life Sciences [q-bio]/Biodiversity/Systematics Phylogenetics and taxonomy [SDV.MP.PAR]Life Sciences [q-bio]/Microbiology and Parasitology/Parasitology info:eu-repo/semantics/article Journal articles 2018 ftciradhal https://doi.org/10.1007/s11230-018-9778-0 2024-05-16T11:25:49Z International audience More than a dozen Gongylonema spp. (Spirurida: Spiruroidea: Gongylonematidae) have been described from a variety of rodent hosts worldwide. Gongylonema neoplasticum (Fibiger & Ditlevsen, 1914), which dwells in the gastric mucosa of rats such as Rattus norvegicus (Berkenhout) and Rattus rattus (Linnaeus), is currently regarded as a cosmopolitan nematode in accordance with global dispersion of its definitive hosts beyond Asia. To facilitate the reliable specific differentiation of local rodent Gongylonema spp. from the cosmopolitan congener, the genetic characterisation of G. neoplasticum from Asian Rattus spp. in the original endemic area should be considered since the morphological identification of Gongylonema spp. is often difficult due to variations of critical phenotypical characters, e.g. spicule lengths and numbers of caudal papillae. In the present study, morphologically identified G. neoplasticum from 114 rats of seven species from Southeast Asia were selected from archived survey materials from almost 4,500 rodents: Thailand (58 rats), Cambodia (52 rats), Laos (three rats) and Philippines (one rat). In addition, several specimens from four rats in Indonesia were used in the study. Nucleotide sequences of the ribosomal RNA gene (rDNA) (5,649 bp) and the cytochrome c oxidase subunit 1 gene (cox1) (818 bp) were characterised. The rDNA showed little nucleotide variation, including the internal transcribed spacer (ITS) regions. The cox1 showed 24 haplotypes, with up to 15 (1.83%) nucleotide substitutions regardless of parasite origin. Considering that Rattus spp. have been shown to originate from the southern region of Asia and G. neoplasticum is their endogenous parasite, it is reasonable to propose that the present study covers a wide spectrum of the genetic diversity of G. neoplasticum , useful for both the molecular genetic speculation of the species and the molecular genetic differentiation of other local rodent Gongylonema spp. from the cosmopolitan congener. Article in Journal/Newspaper Rattus rattus CIRAD: HAL (Agricultural Research for Development) Systematic Parasitology 95 2-3 235 247 |
institution |
Open Polar |
collection |
CIRAD: HAL (Agricultural Research for Development) |
op_collection_id |
ftciradhal |
language |
English |
topic |
[SDV.BID.SPT]Life Sciences [q-bio]/Biodiversity/Systematics Phylogenetics and taxonomy [SDV.MP.PAR]Life Sciences [q-bio]/Microbiology and Parasitology/Parasitology |
spellingShingle |
[SDV.BID.SPT]Life Sciences [q-bio]/Biodiversity/Systematics Phylogenetics and taxonomy [SDV.MP.PAR]Life Sciences [q-bio]/Microbiology and Parasitology/Parasitology Setsuda, Aogu Ribas, Alexis Chaisiri, Kittipong Morand, Serge Chou, Monidarin Malbas, Fidelino Yunus, Muchammad Sato, Hiroshi Molecular genetic diversity of Gongylonema neoplasticum (Fibiger & Ditlevsen, 1914) (Spirurida: Gongylonematidae) from rodents in Southeast Asia |
topic_facet |
[SDV.BID.SPT]Life Sciences [q-bio]/Biodiversity/Systematics Phylogenetics and taxonomy [SDV.MP.PAR]Life Sciences [q-bio]/Microbiology and Parasitology/Parasitology |
description |
International audience More than a dozen Gongylonema spp. (Spirurida: Spiruroidea: Gongylonematidae) have been described from a variety of rodent hosts worldwide. Gongylonema neoplasticum (Fibiger & Ditlevsen, 1914), which dwells in the gastric mucosa of rats such as Rattus norvegicus (Berkenhout) and Rattus rattus (Linnaeus), is currently regarded as a cosmopolitan nematode in accordance with global dispersion of its definitive hosts beyond Asia. To facilitate the reliable specific differentiation of local rodent Gongylonema spp. from the cosmopolitan congener, the genetic characterisation of G. neoplasticum from Asian Rattus spp. in the original endemic area should be considered since the morphological identification of Gongylonema spp. is often difficult due to variations of critical phenotypical characters, e.g. spicule lengths and numbers of caudal papillae. In the present study, morphologically identified G. neoplasticum from 114 rats of seven species from Southeast Asia were selected from archived survey materials from almost 4,500 rodents: Thailand (58 rats), Cambodia (52 rats), Laos (three rats) and Philippines (one rat). In addition, several specimens from four rats in Indonesia were used in the study. Nucleotide sequences of the ribosomal RNA gene (rDNA) (5,649 bp) and the cytochrome c oxidase subunit 1 gene (cox1) (818 bp) were characterised. The rDNA showed little nucleotide variation, including the internal transcribed spacer (ITS) regions. The cox1 showed 24 haplotypes, with up to 15 (1.83%) nucleotide substitutions regardless of parasite origin. Considering that Rattus spp. have been shown to originate from the southern region of Asia and G. neoplasticum is their endogenous parasite, it is reasonable to propose that the present study covers a wide spectrum of the genetic diversity of G. neoplasticum , useful for both the molecular genetic speculation of the species and the molecular genetic differentiation of other local rodent Gongylonema spp. from the cosmopolitan congener. |
author2 |
Yamaguchi University Yamaguchi University of Barcelona Mahidol University Bangkok Animal, Santé, Territoires, Risques et Ecosystèmes (UMR ASTRE) Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut National de la Recherche Agronomique (INRA) Laboratoire Rodolphe Mérieux Faculté de Pharmacie, Université des Sciences de la Santé Research Institute for Tropical Medicine Muntinlupa City, Philippines Airlangga University JSPS KAKENHI grants 15K07722, 15H05261 Heiwa Nakajima Foundation |
format |
Article in Journal/Newspaper |
author |
Setsuda, Aogu Ribas, Alexis Chaisiri, Kittipong Morand, Serge Chou, Monidarin Malbas, Fidelino Yunus, Muchammad Sato, Hiroshi |
author_facet |
Setsuda, Aogu Ribas, Alexis Chaisiri, Kittipong Morand, Serge Chou, Monidarin Malbas, Fidelino Yunus, Muchammad Sato, Hiroshi |
author_sort |
Setsuda, Aogu |
title |
Molecular genetic diversity of Gongylonema neoplasticum (Fibiger & Ditlevsen, 1914) (Spirurida: Gongylonematidae) from rodents in Southeast Asia |
title_short |
Molecular genetic diversity of Gongylonema neoplasticum (Fibiger & Ditlevsen, 1914) (Spirurida: Gongylonematidae) from rodents in Southeast Asia |
title_full |
Molecular genetic diversity of Gongylonema neoplasticum (Fibiger & Ditlevsen, 1914) (Spirurida: Gongylonematidae) from rodents in Southeast Asia |
title_fullStr |
Molecular genetic diversity of Gongylonema neoplasticum (Fibiger & Ditlevsen, 1914) (Spirurida: Gongylonematidae) from rodents in Southeast Asia |
title_full_unstemmed |
Molecular genetic diversity of Gongylonema neoplasticum (Fibiger & Ditlevsen, 1914) (Spirurida: Gongylonematidae) from rodents in Southeast Asia |
title_sort |
molecular genetic diversity of gongylonema neoplasticum (fibiger & ditlevsen, 1914) (spirurida: gongylonematidae) from rodents in southeast asia |
publisher |
HAL CCSD |
publishDate |
2018 |
url |
https://hal.science/hal-02394770 https://doi.org/10.1007/s11230-018-9778-0 |
genre |
Rattus rattus |
genre_facet |
Rattus rattus |
op_source |
ISSN: 0165-5752 EISSN: 1573-5192 Systematic Parasitology https://hal.science/hal-02394770 Systematic Parasitology, 2018, 95 (2-3), pp.235-247. ⟨10.1007/s11230-018-9778-0⟩ |
op_relation |
info:eu-repo/semantics/altIdentifier/doi/10.1007/s11230-018-9778-0 info:eu-repo/semantics/altIdentifier/pmid/29446034 hal-02394770 https://hal.science/hal-02394770 doi:10.1007/s11230-018-9778-0 PRODINRA: 424390 PUBMED: 29446034 WOS: 000426077500008 |
op_doi |
https://doi.org/10.1007/s11230-018-9778-0 |
container_title |
Systematic Parasitology |
container_volume |
95 |
container_issue |
2-3 |
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235 |
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247 |
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1801381610791108608 |