Investigating avian influenza infection hotspots in old-world shorebirds

Heterogeneity in the transmission rates of pathogens across hosts or environments may produce disease hotspots, which are defined as specific sites, times or species associations in which the infection rate is consistently elevated. Hotspots for avian influenza virus (AIV) in wild birds are largely...

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Published in:PLoS ONE
Main Authors: Gaidet, Nicolas, Ould El Mamy, Ahmed Bezeid, Cappelle, Julien, Caron, Alexandre, Cumming, Graeme S., Grosbois, Vladimir, Gil, Patricia, Hammoumi, Saliha, Servan de Almeida, Renata, Fereidouni, Sasan R., Cattoli, Giovanni, Abolnik, Célia, Mundava, Josephine, Fofana, Bouba, Ndlovu, Mduduzi, Diawara, Yelli, Hurtado, Renata, Dodman, Tim, Balança, Gilles
Format: Article in Journal/Newspaper
Language:English
Published: 2012
Subjects:
Online Access:http://agritrop.cirad.fr/565918/
http://agritrop.cirad.fr/565918/1/document_565918.pdf
https://doi.org/10.1371/journal.pone.0046049
http://catalogue-bibliotheques.cirad.fr/cgi-bin/koha/opac-detail.pl?biblionumber=215777
id ftcirad:oai:agritrop.cirad.fr:565918
record_format openpolar
institution Open Polar
collection CIRAD: Agritrop (Centre de coopération internationale en recherche agronomique pour le développement)
op_collection_id ftcirad
language English
topic L72 - Organismes nuisibles des animaux
L73 - Maladies des animaux
Influenzavirus aviaire
Oiseau aquatique
Animal sauvage
Hôte
Identification
Vecteur de maladie
Migration animale
Enquête
http://aims.fao.org/aos/agrovoc/c_9017
http://aims.fao.org/aos/agrovoc/c_8331
http://aims.fao.org/aos/agrovoc/c_24103
http://aims.fao.org/aos/agrovoc/c_3673
http://aims.fao.org/aos/agrovoc/c_3791
http://aims.fao.org/aos/agrovoc/c_8164
http://aims.fao.org/aos/agrovoc/c_32926
http://aims.fao.org/aos/agrovoc/c_7537
http://aims.fao.org/aos/agrovoc/c_2723
http://aims.fao.org/aos/agrovoc/c_165
spellingShingle L72 - Organismes nuisibles des animaux
L73 - Maladies des animaux
Influenzavirus aviaire
Oiseau aquatique
Animal sauvage
Hôte
Identification
Vecteur de maladie
Migration animale
Enquête
http://aims.fao.org/aos/agrovoc/c_9017
http://aims.fao.org/aos/agrovoc/c_8331
http://aims.fao.org/aos/agrovoc/c_24103
http://aims.fao.org/aos/agrovoc/c_3673
http://aims.fao.org/aos/agrovoc/c_3791
http://aims.fao.org/aos/agrovoc/c_8164
http://aims.fao.org/aos/agrovoc/c_32926
http://aims.fao.org/aos/agrovoc/c_7537
http://aims.fao.org/aos/agrovoc/c_2723
http://aims.fao.org/aos/agrovoc/c_165
Gaidet, Nicolas
Ould El Mamy, Ahmed Bezeid
Cappelle, Julien
Caron, Alexandre
Cumming, Graeme S.
Grosbois, Vladimir
Gil, Patricia
Hammoumi, Saliha
Servan de Almeida, Renata
Fereidouni, Sasan R.
Cattoli, Giovanni
Abolnik, Célia
Mundava, Josephine
Fofana, Bouba
Ndlovu, Mduduzi
Diawara, Yelli
Hurtado, Renata
Dodman, Tim
Balança, Gilles
Investigating avian influenza infection hotspots in old-world shorebirds
topic_facet L72 - Organismes nuisibles des animaux
L73 - Maladies des animaux
Influenzavirus aviaire
Oiseau aquatique
Animal sauvage
Hôte
Identification
Vecteur de maladie
Migration animale
Enquête
http://aims.fao.org/aos/agrovoc/c_9017
http://aims.fao.org/aos/agrovoc/c_8331
http://aims.fao.org/aos/agrovoc/c_24103
http://aims.fao.org/aos/agrovoc/c_3673
http://aims.fao.org/aos/agrovoc/c_3791
http://aims.fao.org/aos/agrovoc/c_8164
http://aims.fao.org/aos/agrovoc/c_32926
http://aims.fao.org/aos/agrovoc/c_7537
http://aims.fao.org/aos/agrovoc/c_2723
http://aims.fao.org/aos/agrovoc/c_165
description Heterogeneity in the transmission rates of pathogens across hosts or environments may produce disease hotspots, which are defined as specific sites, times or species associations in which the infection rate is consistently elevated. Hotspots for avian influenza virus (AIV) in wild birds are largely unstudied and poorly understood. A striking feature is the existence of a unique but consistent AIV hotspot in shorebirds (Charadriiformes) associated with a single species at a specific location and time (ruddy turnstone Arenaria interpres at Delaware Bay, USA, in May). This unique case, though a valuable reference, limits our capacity to explore and understand the general properties of AIV hotspots in shorebirds. Unfortunately, relatively few shorebirds have been sampled outside Delaware Bay and they belong to only a few shorebird families; there also has been a lack of consistent oropharyngeal sampling as a complement to cloacal sampling. In this study we looked for AIV hotspots associated with other shorebird species and/or with some of the larger congregation sites of shorebirds in the old world. We assembled and analysed a regionally extensive dataset of AIV prevalence from 69 shorebird species sampled in 25 countries across Africa and Western Eurasia. Despite this diverse and extensive coverage we did not detect any new shorebird AIV hotspots. Neither large shorebird congregation sites nor the ruddy turnstone were consistently associated with AIV hotspots. We did, however, find a low but widespread circulation of AIV in shorebirds that contrast with the absence of AIV previously reported in shorebirds in Europe. A very high AIV antibody prevalence coupled to a low infection rate was found in both first-year and adult birds of two migratory sandpiper species, suggesting the potential existence of an AIV hotspot along their migratory flyway that is yet to be discovered.
format Article in Journal/Newspaper
author Gaidet, Nicolas
Ould El Mamy, Ahmed Bezeid
Cappelle, Julien
Caron, Alexandre
Cumming, Graeme S.
Grosbois, Vladimir
Gil, Patricia
Hammoumi, Saliha
Servan de Almeida, Renata
Fereidouni, Sasan R.
Cattoli, Giovanni
Abolnik, Célia
Mundava, Josephine
Fofana, Bouba
Ndlovu, Mduduzi
Diawara, Yelli
Hurtado, Renata
Dodman, Tim
Balança, Gilles
author_facet Gaidet, Nicolas
Ould El Mamy, Ahmed Bezeid
Cappelle, Julien
Caron, Alexandre
Cumming, Graeme S.
Grosbois, Vladimir
Gil, Patricia
Hammoumi, Saliha
Servan de Almeida, Renata
Fereidouni, Sasan R.
Cattoli, Giovanni
Abolnik, Célia
Mundava, Josephine
Fofana, Bouba
Ndlovu, Mduduzi
Diawara, Yelli
Hurtado, Renata
Dodman, Tim
Balança, Gilles
author_sort Gaidet, Nicolas
title Investigating avian influenza infection hotspots in old-world shorebirds
title_short Investigating avian influenza infection hotspots in old-world shorebirds
title_full Investigating avian influenza infection hotspots in old-world shorebirds
title_fullStr Investigating avian influenza infection hotspots in old-world shorebirds
title_full_unstemmed Investigating avian influenza infection hotspots in old-world shorebirds
title_sort investigating avian influenza infection hotspots in old-world shorebirds
publishDate 2012
url http://agritrop.cirad.fr/565918/
http://agritrop.cirad.fr/565918/1/document_565918.pdf
https://doi.org/10.1371/journal.pone.0046049
http://catalogue-bibliotheques.cirad.fr/cgi-bin/koha/opac-detail.pl?biblionumber=215777
op_coverage Eurasie
Afrique
genre Arenaria interpres
Ruddy Turnstone
genre_facet Arenaria interpres
Ruddy Turnstone
op_source PloS One
op_relation http://agritrop.cirad.fr/565918/
Investigating avian influenza infection hotspots in old-world shorebirds. Gaidet Nicolas, Ould El Mamy Ahmed Bezeid, Cappelle Julien, Caron Alexandre, Cumming Graeme S., Grosbois Vladimir, Gil Patricia, Hammoumi Saliha, Servan de Almeida Renata, Fereidouni Sasan R., Cattoli Giovanni, Abolnik Célia, Mundava Josephine, Fofana Bouba, Ndlovu Mduduzi, Diawara Yelli, Hurtado Renata, Dodman Tim, Balança Gilles. 2012. PloS One, 7 (9):e46049, 12 p.https://doi.org/10.1371/journal.pone.0046049 <https://doi.org/10.1371/journal.pone.0046049>
http://agritrop.cirad.fr/565918/1/document_565918.pdf
op_rights Cirad license
info:eu-repo/semantics/openAccess
https://agritrop.cirad.fr/mention_legale.html
op_doi https://doi.org/10.1371/journal.pone.0046049
container_title PLoS ONE
container_volume 7
container_issue 9
container_start_page e46049
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spelling ftcirad:oai:agritrop.cirad.fr:565918 2023-05-15T15:23:19+02:00 Investigating avian influenza infection hotspots in old-world shorebirds Gaidet, Nicolas Ould El Mamy, Ahmed Bezeid Cappelle, Julien Caron, Alexandre Cumming, Graeme S. Grosbois, Vladimir Gil, Patricia Hammoumi, Saliha Servan de Almeida, Renata Fereidouni, Sasan R. Cattoli, Giovanni Abolnik, Célia Mundava, Josephine Fofana, Bouba Ndlovu, Mduduzi Diawara, Yelli Hurtado, Renata Dodman, Tim Balança, Gilles Eurasie Afrique 2012 application/pdf http://agritrop.cirad.fr/565918/ http://agritrop.cirad.fr/565918/1/document_565918.pdf https://doi.org/10.1371/journal.pone.0046049 http://catalogue-bibliotheques.cirad.fr/cgi-bin/koha/opac-detail.pl?biblionumber=215777 eng eng http://agritrop.cirad.fr/565918/ Investigating avian influenza infection hotspots in old-world shorebirds. Gaidet Nicolas, Ould El Mamy Ahmed Bezeid, Cappelle Julien, Caron Alexandre, Cumming Graeme S., Grosbois Vladimir, Gil Patricia, Hammoumi Saliha, Servan de Almeida Renata, Fereidouni Sasan R., Cattoli Giovanni, Abolnik Célia, Mundava Josephine, Fofana Bouba, Ndlovu Mduduzi, Diawara Yelli, Hurtado Renata, Dodman Tim, Balança Gilles. 2012. PloS One, 7 (9):e46049, 12 p.https://doi.org/10.1371/journal.pone.0046049 <https://doi.org/10.1371/journal.pone.0046049> http://agritrop.cirad.fr/565918/1/document_565918.pdf Cirad license info:eu-repo/semantics/openAccess https://agritrop.cirad.fr/mention_legale.html PloS One L72 - Organismes nuisibles des animaux L73 - Maladies des animaux Influenzavirus aviaire Oiseau aquatique Animal sauvage Hôte Identification Vecteur de maladie Migration animale Enquête http://aims.fao.org/aos/agrovoc/c_9017 http://aims.fao.org/aos/agrovoc/c_8331 http://aims.fao.org/aos/agrovoc/c_24103 http://aims.fao.org/aos/agrovoc/c_3673 http://aims.fao.org/aos/agrovoc/c_3791 http://aims.fao.org/aos/agrovoc/c_8164 http://aims.fao.org/aos/agrovoc/c_32926 http://aims.fao.org/aos/agrovoc/c_7537 http://aims.fao.org/aos/agrovoc/c_2723 http://aims.fao.org/aos/agrovoc/c_165 article info:eu-repo/semantics/article Journal Article info:eu-repo/semantics/publishedVersion 2012 ftcirad https://doi.org/10.1371/journal.pone.0046049 2022-04-05T22:47:53Z Heterogeneity in the transmission rates of pathogens across hosts or environments may produce disease hotspots, which are defined as specific sites, times or species associations in which the infection rate is consistently elevated. Hotspots for avian influenza virus (AIV) in wild birds are largely unstudied and poorly understood. A striking feature is the existence of a unique but consistent AIV hotspot in shorebirds (Charadriiformes) associated with a single species at a specific location and time (ruddy turnstone Arenaria interpres at Delaware Bay, USA, in May). This unique case, though a valuable reference, limits our capacity to explore and understand the general properties of AIV hotspots in shorebirds. Unfortunately, relatively few shorebirds have been sampled outside Delaware Bay and they belong to only a few shorebird families; there also has been a lack of consistent oropharyngeal sampling as a complement to cloacal sampling. In this study we looked for AIV hotspots associated with other shorebird species and/or with some of the larger congregation sites of shorebirds in the old world. We assembled and analysed a regionally extensive dataset of AIV prevalence from 69 shorebird species sampled in 25 countries across Africa and Western Eurasia. Despite this diverse and extensive coverage we did not detect any new shorebird AIV hotspots. Neither large shorebird congregation sites nor the ruddy turnstone were consistently associated with AIV hotspots. We did, however, find a low but widespread circulation of AIV in shorebirds that contrast with the absence of AIV previously reported in shorebirds in Europe. A very high AIV antibody prevalence coupled to a low infection rate was found in both first-year and adult birds of two migratory sandpiper species, suggesting the potential existence of an AIV hotspot along their migratory flyway that is yet to be discovered. Article in Journal/Newspaper Arenaria interpres Ruddy Turnstone CIRAD: Agritrop (Centre de coopération internationale en recherche agronomique pour le développement) PLoS ONE 7 9 e46049