Delineation of Chondrus (Gigartinales, Florideophyceae) in China and the origin of C-crispus inferred from molecular data

Complete nuclear ribosomal DNA (nrDNA) internal transcribed spacer (ITS) sequences were obtained for 18 Chondrus populations collected at 15 sites from eight countries worldwide. Pairwise comparisons with the multiple alignment revealed that intraspecific divergences of ITS sequences ranged from 0.3...

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Published in:Marine Biology Research
Main Authors: Hu, Zimin, Critchley, Alan T., Gao, Tianxiang, Zeng, Xiaoqi, Morrell, Steve L., Duan, Delin
Format: Article in Journal/Newspaper
Language:English
Published: 2007
Subjects:
Online Access:http://ir.qdio.ac.cn/handle/337002/32598
https://doi.org/10.1080/17451000701335679
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spelling ftchinacasciocas:oai:ir.qdio.ac.cn:337002/32598 2023-05-15T15:12:11+02:00 Delineation of Chondrus (Gigartinales, Florideophyceae) in China and the origin of C-crispus inferred from molecular data Hu, Zimin Critchley, Alan T. Gao, Tianxiang Zeng, Xiaoqi Morrell, Steve L. Duan, Delin 2007 http://ir.qdio.ac.cn/handle/337002/32598 https://doi.org/10.1080/17451000701335679 英语 eng MARINE BIOLOGY RESEARCH http://ir.qdio.ac.cn/handle/337002/32598 doi:10.1080/17451000701335679 Biogeography Chondrus Stackhouse Internal Transcribed Spacer Phylogeny Taxonomy Article 期刊论文 2007 ftchinacasciocas https://doi.org/10.1080/17451000701335679 2022-06-27T05:37:01Z Complete nuclear ribosomal DNA (nrDNA) internal transcribed spacer (ITS) sequences were obtained for 18 Chondrus populations collected at 15 sites from eight countries worldwide. Pairwise comparisons with the multiple alignment revealed that intraspecific divergences of ITS sequences ranged from 0.3 to 1.8% in C. crispus Stackhouse (except for the entity SVLH from France) and from 0.0 to 0.6% in C. ocellatus Holmes, whereas interspecific divergences in Chondrus varied from 1.4 to 5.0%. Three phylogenetic methods (neighbour joining, maximum parsimony and maximum likelihood) confirmed three main lineages: the North Atlantic lineage containing entities of C. crispus from Canada, France, Germany, England, Portugal, Ireland and Wales; a second lineage comprising three species: C. sp. 1, C. armatus (Harvey) Yamada et Mikami, and C. pinnulatus (Harvey) Okamura from the Northern Pacific; and a third lineage containing just one species: C. ocellatus from the Northern Pacific. Chondrus yendoi Yamada et Mikami separated from other Chondrus species singly. nrDNA ITS data indicate that a previous assignment of C. sp. 2 to Mazzaella japonica (Mikami) Hommersand may be incorrect, and additional evidence is needed to resolve the generic placement of this entity. It is inferred from the nrDNA ITS data that three Chondrus species are presently known in China with two, C. ocellatus and C. nipponicus, in Qingdao and two, C. armatus and C. nipponicus, in Dalian. We hypothesize that the ancestor of North Atlantic C. crispus had a Pacific origin, and that the present distribution of C. crispus in the Atlantic Ocean correlates with a trans-Arctic dispersal and vicariance events associated with Pleistocene glaciation maxima. Article in Journal/Newspaper Arctic North Atlantic Institute of Oceanology, Chinese Academy of Sciences: IOCAS-IR Arctic Canada Pacific Marine Biology Research 3 3 145 154
institution Open Polar
collection Institute of Oceanology, Chinese Academy of Sciences: IOCAS-IR
op_collection_id ftchinacasciocas
language English
topic Biogeography
Chondrus Stackhouse
Internal Transcribed Spacer
Phylogeny
Taxonomy
spellingShingle Biogeography
Chondrus Stackhouse
Internal Transcribed Spacer
Phylogeny
Taxonomy
Hu, Zimin
Critchley, Alan T.
Gao, Tianxiang
Zeng, Xiaoqi
Morrell, Steve L.
Duan, Delin
Delineation of Chondrus (Gigartinales, Florideophyceae) in China and the origin of C-crispus inferred from molecular data
topic_facet Biogeography
Chondrus Stackhouse
Internal Transcribed Spacer
Phylogeny
Taxonomy
description Complete nuclear ribosomal DNA (nrDNA) internal transcribed spacer (ITS) sequences were obtained for 18 Chondrus populations collected at 15 sites from eight countries worldwide. Pairwise comparisons with the multiple alignment revealed that intraspecific divergences of ITS sequences ranged from 0.3 to 1.8% in C. crispus Stackhouse (except for the entity SVLH from France) and from 0.0 to 0.6% in C. ocellatus Holmes, whereas interspecific divergences in Chondrus varied from 1.4 to 5.0%. Three phylogenetic methods (neighbour joining, maximum parsimony and maximum likelihood) confirmed three main lineages: the North Atlantic lineage containing entities of C. crispus from Canada, France, Germany, England, Portugal, Ireland and Wales; a second lineage comprising three species: C. sp. 1, C. armatus (Harvey) Yamada et Mikami, and C. pinnulatus (Harvey) Okamura from the Northern Pacific; and a third lineage containing just one species: C. ocellatus from the Northern Pacific. Chondrus yendoi Yamada et Mikami separated from other Chondrus species singly. nrDNA ITS data indicate that a previous assignment of C. sp. 2 to Mazzaella japonica (Mikami) Hommersand may be incorrect, and additional evidence is needed to resolve the generic placement of this entity. It is inferred from the nrDNA ITS data that three Chondrus species are presently known in China with two, C. ocellatus and C. nipponicus, in Qingdao and two, C. armatus and C. nipponicus, in Dalian. We hypothesize that the ancestor of North Atlantic C. crispus had a Pacific origin, and that the present distribution of C. crispus in the Atlantic Ocean correlates with a trans-Arctic dispersal and vicariance events associated with Pleistocene glaciation maxima.
format Article in Journal/Newspaper
author Hu, Zimin
Critchley, Alan T.
Gao, Tianxiang
Zeng, Xiaoqi
Morrell, Steve L.
Duan, Delin
author_facet Hu, Zimin
Critchley, Alan T.
Gao, Tianxiang
Zeng, Xiaoqi
Morrell, Steve L.
Duan, Delin
author_sort Hu, Zimin
title Delineation of Chondrus (Gigartinales, Florideophyceae) in China and the origin of C-crispus inferred from molecular data
title_short Delineation of Chondrus (Gigartinales, Florideophyceae) in China and the origin of C-crispus inferred from molecular data
title_full Delineation of Chondrus (Gigartinales, Florideophyceae) in China and the origin of C-crispus inferred from molecular data
title_fullStr Delineation of Chondrus (Gigartinales, Florideophyceae) in China and the origin of C-crispus inferred from molecular data
title_full_unstemmed Delineation of Chondrus (Gigartinales, Florideophyceae) in China and the origin of C-crispus inferred from molecular data
title_sort delineation of chondrus (gigartinales, florideophyceae) in china and the origin of c-crispus inferred from molecular data
publishDate 2007
url http://ir.qdio.ac.cn/handle/337002/32598
https://doi.org/10.1080/17451000701335679
geographic Arctic
Canada
Pacific
geographic_facet Arctic
Canada
Pacific
genre Arctic
North Atlantic
genre_facet Arctic
North Atlantic
op_relation MARINE BIOLOGY RESEARCH
http://ir.qdio.ac.cn/handle/337002/32598
doi:10.1080/17451000701335679
op_doi https://doi.org/10.1080/17451000701335679
container_title Marine Biology Research
container_volume 3
container_issue 3
container_start_page 145
op_container_end_page 154
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