Mitochondrial genomes and 28S rDNA contradict the proposed obsoletion of the order Tetraonchidea (Platyhelminthes: Monogenea)

Due to the incongruence of morphology-based hypotheses and scarcity of molecular data, validity of the order Tetraonchidea remains contentious. The only complete mitogenome currently available for the entire order is that of Paratetraonchoides inermis (Tetraonchoididae). To study the phylogeny of Te...

Full description

Bibliographic Details
Published in:International Journal of Biological Macromolecules
Main Authors: Zhang, Dong, Li, Wen X., Zou, Hong, Wu, Shan G., Li, Ming, Jakovlic, Ivan, Zhang, Jin, Chen, Rong, Wang, Gui T.
Format: Report
Language:English
Published: ELSEVIER 2020
Subjects:
Online Access:http://ir.ihb.ac.cn/handle/342005/35045
https://doi.org/10.1016/j.ijbiomac.2019.09.150
id ftchinacadsciihb:oai:ir.ihb.ac.cn:342005/35045
record_format openpolar
spelling ftchinacadsciihb:oai:ir.ihb.ac.cn:342005/35045 2023-05-15T15:32:39+02:00 Mitochondrial genomes and 28S rDNA contradict the proposed obsoletion of the order Tetraonchidea (Platyhelminthes: Monogenea) Zhang, Dong Li, Wen X. Zou, Hong Wu, Shan G. Li, Ming Jakovlic, Ivan Zhang, Jin Chen, Rong Wang, Gui T. 2020-01-15 http://ir.ihb.ac.cn/handle/342005/35045 https://doi.org/10.1016/j.ijbiomac.2019.09.150 英语 eng ELSEVIER INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES http://ir.ihb.ac.cn/handle/342005/35045 doi:10.1016/j.ijbiomac.2019.09.150 Tetraonchidae Gene rearrangement Monogenea taxonomy Biochemistry & Molecular Biology Chemistry Polymer Science Applied TRANSFER-RNA GENES GYRODACTYLUS-SALARIS MONOPISTHOCOTYLEAN MONOGENEANS MOLECULAR PHYLOGENY ATLANTIC SALMON MODEL SELECTION DNA VARIATION EVOLUTION DACTYLOGYRIDAE CLASSIFICATION 期刊论文 2020 ftchinacadsciihb https://doi.org/10.1016/j.ijbiomac.2019.09.150 2020-04-24T00:06:08Z Due to the incongruence of morphology-based hypotheses and scarcity of molecular data, validity of the order Tetraonchidea remains contentious. The only complete mitogenome currently available for the entire order is that of Paratetraonchoides inermis (Tetraonchoididae). To study the phylogeny of Tetraonchidea from mitogenomic perspective, we sequenced the first mitogenome for the family Tetraonchidae: Tetraonchus monenteron (Tetraonchidea). To get a nuclear-data perspective, we also sequenced nuclear 28S rDNA gene of both species. The mitogenome of T. monenteron does not have high A + T content, nor tRNA pseudo-genes, both of which were unique features reported in P. inermis. However, T. monenteron exhibits a unique gene order, with a large number of tRNA rearrangements in comparison to P. inermis and other monogeneans. Phylogenetic analyses conducted using Bayesian inference and maximum likelihood methods, complemented with partitioning, consistently support the sister-group relationship of T. monenteron (Tetraonchidae) and P. inermis (Tetraonchoididae). This is also partially supported by the 28S rDNA data and two morphologic apomorphies. This close relationship of Tetraonchidae and Tetraonchoididae challenges the latest major morphology-based classification, which proposed obsoletion of the Tetraonchidea order, and grouped Tetraonchoididae into the Gyrodactylidea Glade. The validity of this order shall have to be further confirmed with more data. (C) 2019 Elsevier B.V. All rights reserved. Report Atlantic salmon Institute of Hydrobiology, Chinese Academy of Sciences: IHB OpenIR International Journal of Biological Macromolecules 143 891 901
institution Open Polar
collection Institute of Hydrobiology, Chinese Academy of Sciences: IHB OpenIR
op_collection_id ftchinacadsciihb
language English
topic Tetraonchidae
Gene rearrangement
Monogenea taxonomy
Biochemistry & Molecular Biology
Chemistry
Polymer Science
Applied
TRANSFER-RNA GENES
GYRODACTYLUS-SALARIS
MONOPISTHOCOTYLEAN MONOGENEANS
MOLECULAR PHYLOGENY
ATLANTIC SALMON
MODEL SELECTION
DNA VARIATION
EVOLUTION
DACTYLOGYRIDAE
CLASSIFICATION
spellingShingle Tetraonchidae
Gene rearrangement
Monogenea taxonomy
Biochemistry & Molecular Biology
Chemistry
Polymer Science
Applied
TRANSFER-RNA GENES
GYRODACTYLUS-SALARIS
MONOPISTHOCOTYLEAN MONOGENEANS
MOLECULAR PHYLOGENY
ATLANTIC SALMON
MODEL SELECTION
DNA VARIATION
EVOLUTION
DACTYLOGYRIDAE
CLASSIFICATION
Zhang, Dong
Li, Wen X.
Zou, Hong
Wu, Shan G.
Li, Ming
Jakovlic, Ivan
Zhang, Jin
Chen, Rong
Wang, Gui T.
Mitochondrial genomes and 28S rDNA contradict the proposed obsoletion of the order Tetraonchidea (Platyhelminthes: Monogenea)
topic_facet Tetraonchidae
Gene rearrangement
Monogenea taxonomy
Biochemistry & Molecular Biology
Chemistry
Polymer Science
Applied
TRANSFER-RNA GENES
GYRODACTYLUS-SALARIS
MONOPISTHOCOTYLEAN MONOGENEANS
MOLECULAR PHYLOGENY
ATLANTIC SALMON
MODEL SELECTION
DNA VARIATION
EVOLUTION
DACTYLOGYRIDAE
CLASSIFICATION
description Due to the incongruence of morphology-based hypotheses and scarcity of molecular data, validity of the order Tetraonchidea remains contentious. The only complete mitogenome currently available for the entire order is that of Paratetraonchoides inermis (Tetraonchoididae). To study the phylogeny of Tetraonchidea from mitogenomic perspective, we sequenced the first mitogenome for the family Tetraonchidae: Tetraonchus monenteron (Tetraonchidea). To get a nuclear-data perspective, we also sequenced nuclear 28S rDNA gene of both species. The mitogenome of T. monenteron does not have high A + T content, nor tRNA pseudo-genes, both of which were unique features reported in P. inermis. However, T. monenteron exhibits a unique gene order, with a large number of tRNA rearrangements in comparison to P. inermis and other monogeneans. Phylogenetic analyses conducted using Bayesian inference and maximum likelihood methods, complemented with partitioning, consistently support the sister-group relationship of T. monenteron (Tetraonchidae) and P. inermis (Tetraonchoididae). This is also partially supported by the 28S rDNA data and two morphologic apomorphies. This close relationship of Tetraonchidae and Tetraonchoididae challenges the latest major morphology-based classification, which proposed obsoletion of the Tetraonchidea order, and grouped Tetraonchoididae into the Gyrodactylidea Glade. The validity of this order shall have to be further confirmed with more data. (C) 2019 Elsevier B.V. All rights reserved.
format Report
author Zhang, Dong
Li, Wen X.
Zou, Hong
Wu, Shan G.
Li, Ming
Jakovlic, Ivan
Zhang, Jin
Chen, Rong
Wang, Gui T.
author_facet Zhang, Dong
Li, Wen X.
Zou, Hong
Wu, Shan G.
Li, Ming
Jakovlic, Ivan
Zhang, Jin
Chen, Rong
Wang, Gui T.
author_sort Zhang, Dong
title Mitochondrial genomes and 28S rDNA contradict the proposed obsoletion of the order Tetraonchidea (Platyhelminthes: Monogenea)
title_short Mitochondrial genomes and 28S rDNA contradict the proposed obsoletion of the order Tetraonchidea (Platyhelminthes: Monogenea)
title_full Mitochondrial genomes and 28S rDNA contradict the proposed obsoletion of the order Tetraonchidea (Platyhelminthes: Monogenea)
title_fullStr Mitochondrial genomes and 28S rDNA contradict the proposed obsoletion of the order Tetraonchidea (Platyhelminthes: Monogenea)
title_full_unstemmed Mitochondrial genomes and 28S rDNA contradict the proposed obsoletion of the order Tetraonchidea (Platyhelminthes: Monogenea)
title_sort mitochondrial genomes and 28s rdna contradict the proposed obsoletion of the order tetraonchidea (platyhelminthes: monogenea)
publisher ELSEVIER
publishDate 2020
url http://ir.ihb.ac.cn/handle/342005/35045
https://doi.org/10.1016/j.ijbiomac.2019.09.150
genre Atlantic salmon
genre_facet Atlantic salmon
op_relation INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES
http://ir.ihb.ac.cn/handle/342005/35045
doi:10.1016/j.ijbiomac.2019.09.150
op_doi https://doi.org/10.1016/j.ijbiomac.2019.09.150
container_title International Journal of Biological Macromolecules
container_volume 143
container_start_page 891
op_container_end_page 901
_version_ 1766363145391046656