Genetic Structuring in a Circum-Antarctic Taxon Investigated using ddRAD Sequencing

The Southern Ocean hosts an abundant and diverse fauna. The evolutionary history of these taxa has been strongly influenced by the oceanographic and glacial history of this region. Molecular studies have challenged the traditional characterization of many Antarctic taxa as circumpolar, uncovering la...

Full description

Bibliographic Details
Main Author: Sasaki, Matthew C.
Format: Doctoral or Postdoctoral Thesis
Language:unknown
Published: eScholarship, University of California 2015
Subjects:
Online Access:http://www.escholarship.org/uc/item/3z4692x7
http://n2t.net/ark:/20775/bb51212856
id ftcdlib:qt3z4692x7
record_format openpolar
spelling ftcdlib:qt3z4692x7 2023-05-15T13:31:50+02:00 Genetic Structuring in a Circum-Antarctic Taxon Investigated using ddRAD Sequencing Sasaki, Matthew C. 1 PDF (xi, 48 pages) 2015-01-01 application/pdf http://www.escholarship.org/uc/item/3z4692x7 http://n2t.net/ark:/20775/bb51212856 unknown eScholarship, University of California http://www.escholarship.org/uc/item/3z4692x7 qt3z4692x7 http://n2t.net/ark:/20775/bb51212856 public Sasaki, Matthew C.(2015). Genetic Structuring in a Circum-Antarctic Taxon Investigated using ddRAD Sequencing. UC San Diego: Retrieved from: http://www.escholarship.org/uc/item/3z4692x7 Academic Dissertations UCSD Dissertations Academic Biology (Discipline) dissertation 2015 ftcdlib 2016-06-24T22:54:55Z The Southern Ocean hosts an abundant and diverse fauna. The evolutionary history of these taxa has been strongly influenced by the oceanographic and glacial history of this region. Molecular studies have challenged the traditional characterization of many Antarctic taxa as circumpolar, uncovering large amounts of unexpected diversity. In this study,we investigate the genetic diversity and population structuring of G. antarctica. Using double digest restriction-site associated DNA sequencing, we obtain a set of 4301 SNP markers from across the genome for a set of four populations spanning a large portion of this taxa's range distribution. This data set reveals clear evidence of strong population structuring across the Southern Ocean, at both large and small geographic scales. We reject the hypothesis of panmixia within the geographic region investigated. The data presents evidence of the influence of both the Antarctic Circumpolar Current and the last glacial maximum on the genetic structure of G. antarctica Doctoral or Postdoctoral Thesis Antarc* Antarctic Antarctica Southern Ocean University of California: eScholarship Antarctic Southern Ocean The Antarctic
institution Open Polar
collection University of California: eScholarship
op_collection_id ftcdlib
language unknown
topic Academic Dissertations
UCSD Dissertations
Academic Biology (Discipline)
spellingShingle Academic Dissertations
UCSD Dissertations
Academic Biology (Discipline)
Sasaki, Matthew C.
Genetic Structuring in a Circum-Antarctic Taxon Investigated using ddRAD Sequencing
topic_facet Academic Dissertations
UCSD Dissertations
Academic Biology (Discipline)
description The Southern Ocean hosts an abundant and diverse fauna. The evolutionary history of these taxa has been strongly influenced by the oceanographic and glacial history of this region. Molecular studies have challenged the traditional characterization of many Antarctic taxa as circumpolar, uncovering large amounts of unexpected diversity. In this study,we investigate the genetic diversity and population structuring of G. antarctica. Using double digest restriction-site associated DNA sequencing, we obtain a set of 4301 SNP markers from across the genome for a set of four populations spanning a large portion of this taxa's range distribution. This data set reveals clear evidence of strong population structuring across the Southern Ocean, at both large and small geographic scales. We reject the hypothesis of panmixia within the geographic region investigated. The data presents evidence of the influence of both the Antarctic Circumpolar Current and the last glacial maximum on the genetic structure of G. antarctica
format Doctoral or Postdoctoral Thesis
author Sasaki, Matthew C.
author_facet Sasaki, Matthew C.
author_sort Sasaki, Matthew C.
title Genetic Structuring in a Circum-Antarctic Taxon Investigated using ddRAD Sequencing
title_short Genetic Structuring in a Circum-Antarctic Taxon Investigated using ddRAD Sequencing
title_full Genetic Structuring in a Circum-Antarctic Taxon Investigated using ddRAD Sequencing
title_fullStr Genetic Structuring in a Circum-Antarctic Taxon Investigated using ddRAD Sequencing
title_full_unstemmed Genetic Structuring in a Circum-Antarctic Taxon Investigated using ddRAD Sequencing
title_sort genetic structuring in a circum-antarctic taxon investigated using ddrad sequencing
publisher eScholarship, University of California
publishDate 2015
url http://www.escholarship.org/uc/item/3z4692x7
http://n2t.net/ark:/20775/bb51212856
op_coverage 1 PDF (xi, 48 pages)
geographic Antarctic
Southern Ocean
The Antarctic
geographic_facet Antarctic
Southern Ocean
The Antarctic
genre Antarc*
Antarctic
Antarctica
Southern Ocean
genre_facet Antarc*
Antarctic
Antarctica
Southern Ocean
op_source Sasaki, Matthew C.(2015). Genetic Structuring in a Circum-Antarctic Taxon Investigated using ddRAD Sequencing. UC San Diego: Retrieved from: http://www.escholarship.org/uc/item/3z4692x7
op_relation http://www.escholarship.org/uc/item/3z4692x7
qt3z4692x7
http://n2t.net/ark:/20775/bb51212856
op_rights public
_version_ 1766021167492104192