Improved high-quality draft genome sequence of the eurypsychrophile Rhodotorula sp. JG1b, isolated from permafrost in the hyperarid upper-elevation McMurdo Dry Valleys, Antarctica

© 2016 Goordial et al. Here, we report the draft genome sequence of Rhodotorula sp. strain JG1b, a yeast that was isolated from ice-cemented permafrost in the upper-elevation McMurdo Dry Valleys, Antarctica. The sequenced genome size is 19.39 Mb, consisting of 156 scaffolds and containing a total of...

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Published in:Genome Announcements
Main Authors: Goordial, J, Raymond-Bouchard, I, Riley, R, Ronholm, J, Shapiro, N, Woyke, T, LaButti, KM, Tice, H, Amirebrahimi, M, Grigoriev, IV, Greer, C, Bakermans, C, Whyte, L
Format: Article in Journal/Newspaper
Language:English
Published: eScholarship, University of California 2016
Subjects:
McMurdo Dry Valleys
Antarc*
Antarctica
Ice
permafrost
Online Access:http://www.escholarship.org/uc/item/0n13x6ps
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spelling ftcdlib:qt0n13x6ps 2023-05-15T13:50:54+02:00 Improved high-quality draft genome sequence of the eurypsychrophile Rhodotorula sp. JG1b, isolated from permafrost in the hyperarid upper-elevation McMurdo Dry Valleys, Antarctica Goordial, J Raymond-Bouchard, I Riley, R Ronholm, J Shapiro, N Woyke, T LaButti, KM Tice, H Amirebrahimi, M Grigoriev, IV Greer, C Bakermans, C Whyte, L 2016-01-01 application/pdf http://www.escholarship.org/uc/item/0n13x6ps english eng eScholarship, University of California qt0n13x6ps http://www.escholarship.org/uc/item/0n13x6ps public Goordial, J; Raymond-Bouchard, I; Riley, R; Ronholm, J; Shapiro, N; Woyke, T; et al.(2016). Improved high-quality draft genome sequence of the eurypsychrophile Rhodotorula sp. JG1b, isolated from permafrost in the hyperarid upper-elevation McMurdo Dry Valleys, Antarctica. Genome Announcements, 4(2). doi:10.1128/genomeA.00069-16. Lawrence Berkeley National Laboratory: Retrieved from: http://www.escholarship.org/uc/item/0n13x6ps article 2016 ftcdlib https://doi.org/10.1128/genomeA.00069-16 2018-07-13T22:56:05Z © 2016 Goordial et al. Here, we report the draft genome sequence of Rhodotorula sp. strain JG1b, a yeast that was isolated from ice-cemented permafrost in the upper-elevation McMurdo Dry Valleys, Antarctica. The sequenced genome size is 19.39 Mb, consisting of 156 scaffolds and containing a total of 5,625 predicted genes. This is the first known cold-adapted Rhodotorula sp. sequenced to date. Article in Journal/Newspaper Antarc* Antarctica Ice McMurdo Dry Valleys permafrost University of California: eScholarship McMurdo Dry Valleys Genome Announcements 4 2
institution Open Polar
collection University of California: eScholarship
op_collection_id ftcdlib
language English
description © 2016 Goordial et al. Here, we report the draft genome sequence of Rhodotorula sp. strain JG1b, a yeast that was isolated from ice-cemented permafrost in the upper-elevation McMurdo Dry Valleys, Antarctica. The sequenced genome size is 19.39 Mb, consisting of 156 scaffolds and containing a total of 5,625 predicted genes. This is the first known cold-adapted Rhodotorula sp. sequenced to date.
format Article in Journal/Newspaper
author Goordial, J
Raymond-Bouchard, I
Riley, R
Ronholm, J
Shapiro, N
Woyke, T
LaButti, KM
Tice, H
Amirebrahimi, M
Grigoriev, IV
Greer, C
Bakermans, C
Whyte, L
spellingShingle Goordial, J
Raymond-Bouchard, I
Riley, R
Ronholm, J
Shapiro, N
Woyke, T
LaButti, KM
Tice, H
Amirebrahimi, M
Grigoriev, IV
Greer, C
Bakermans, C
Whyte, L
Improved high-quality draft genome sequence of the eurypsychrophile Rhodotorula sp. JG1b, isolated from permafrost in the hyperarid upper-elevation McMurdo Dry Valleys, Antarctica
author_facet Goordial, J
Raymond-Bouchard, I
Riley, R
Ronholm, J
Shapiro, N
Woyke, T
LaButti, KM
Tice, H
Amirebrahimi, M
Grigoriev, IV
Greer, C
Bakermans, C
Whyte, L
author_sort Goordial, J
title Improved high-quality draft genome sequence of the eurypsychrophile Rhodotorula sp. JG1b, isolated from permafrost in the hyperarid upper-elevation McMurdo Dry Valleys, Antarctica
title_short Improved high-quality draft genome sequence of the eurypsychrophile Rhodotorula sp. JG1b, isolated from permafrost in the hyperarid upper-elevation McMurdo Dry Valleys, Antarctica
title_full Improved high-quality draft genome sequence of the eurypsychrophile Rhodotorula sp. JG1b, isolated from permafrost in the hyperarid upper-elevation McMurdo Dry Valleys, Antarctica
title_fullStr Improved high-quality draft genome sequence of the eurypsychrophile Rhodotorula sp. JG1b, isolated from permafrost in the hyperarid upper-elevation McMurdo Dry Valleys, Antarctica
title_full_unstemmed Improved high-quality draft genome sequence of the eurypsychrophile Rhodotorula sp. JG1b, isolated from permafrost in the hyperarid upper-elevation McMurdo Dry Valleys, Antarctica
title_sort improved high-quality draft genome sequence of the eurypsychrophile rhodotorula sp. jg1b, isolated from permafrost in the hyperarid upper-elevation mcmurdo dry valleys, antarctica
publisher eScholarship, University of California
publishDate 2016
url http://www.escholarship.org/uc/item/0n13x6ps
geographic McMurdo Dry Valleys
geographic_facet McMurdo Dry Valleys
genre Antarc*
Antarctica
Ice
McMurdo Dry Valleys
permafrost
genre_facet Antarc*
Antarctica
Ice
McMurdo Dry Valleys
permafrost
op_source Goordial, J; Raymond-Bouchard, I; Riley, R; Ronholm, J; Shapiro, N; Woyke, T; et al.(2016). Improved high-quality draft genome sequence of the eurypsychrophile Rhodotorula sp. JG1b, isolated from permafrost in the hyperarid upper-elevation McMurdo Dry Valleys, Antarctica. Genome Announcements, 4(2). doi:10.1128/genomeA.00069-16. Lawrence Berkeley National Laboratory: Retrieved from: http://www.escholarship.org/uc/item/0n13x6ps
op_relation qt0n13x6ps
http://www.escholarship.org/uc/item/0n13x6ps
op_rights public
op_doi https://doi.org/10.1128/genomeA.00069-16
container_title Genome Announcements
container_volume 4
container_issue 2
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