Highly diverse and unknown viruses may enhance Antarctic endoliths’ adaptability

BackgroundRock-dwelling microorganisms are key players in ecosystem functioning of Antarctic ice free-areas. Yet, little is known about their diversity and ecology, and further still, viruses in these communities have been largely unexplored despite important roles related to host metabolism and nut...

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Main Authors: Ettinger, Cassandra L, Saunders, Morgan, Selbmann, Laura, Delgado-Baquerizo, Manuel, Donati, Claudio, Albanese, Davide, Roux, Simon, Tringe, Susannah, Pennacchio, Christa, del Rio, Tijana G, Stajich, Jason E, Coleine, Claudia
Format: Article in Journal/Newspaper
Language:unknown
Published: eScholarship, University of California 2023
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Online Access:https://escholarship.org/uc/item/65p0p1x8
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spelling ftcdlib:oai:escholarship.org:ark:/13030/qt65p0p1x8 2024-01-28T09:59:57+01:00 Highly diverse and unknown viruses may enhance Antarctic endoliths’ adaptability Ettinger, Cassandra L Saunders, Morgan Selbmann, Laura Delgado-Baquerizo, Manuel Donati, Claudio Albanese, Davide Roux, Simon Tringe, Susannah Pennacchio, Christa del Rio, Tijana G Stajich, Jason E Coleine, Claudia 103 2023-01-01 application/pdf https://escholarship.org/uc/item/65p0p1x8 unknown eScholarship, University of California qt65p0p1x8 https://escholarship.org/uc/item/65p0p1x8 CC-BY Microbiome, vol 11, iss 1 Microbiology Biological Sciences Ecology Aetiology 2.2 Factors relating to the physical environment Infection Antarctic Regions Acclimatization Bicycling Climate Microbiota Medical Microbiology Evolutionary biology article 2023 ftcdlib 2024-01-01T19:05:47Z BackgroundRock-dwelling microorganisms are key players in ecosystem functioning of Antarctic ice free-areas. Yet, little is known about their diversity and ecology, and further still, viruses in these communities have been largely unexplored despite important roles related to host metabolism and nutrient cycling. To begin to address this, we present a large-scale viral catalog from Antarctic rock microbial communities.ResultsWe performed metagenomic analyses on rocks from across Antarctica representing a broad range of environmental and spatial conditions, and which resulted in a predicted viral catalog comprising > 75,000 viral operational taxonomic units (vOTUS). We found largely undescribed, highly diverse and spatially structured virus communities which had predicted auxiliary metabolic genes (AMGs) with functions indicating that they may be potentially influencing bacterial adaptation and biogeochemistry.ConclusionThis catalog lays the foundation for expanding knowledge of virosphere diversity, function, spatial ecology, and dynamics in extreme environments. This work serves as a step towards exploring adaptability of microbial communities in the face of a changing climate. Video Abstract. Article in Journal/Newspaper Antarc* Antarctic Antarctica University of California: eScholarship Antarctic
institution Open Polar
collection University of California: eScholarship
op_collection_id ftcdlib
language unknown
topic Microbiology
Biological Sciences
Ecology
Aetiology
2.2 Factors relating to the physical environment
Infection
Antarctic Regions
Acclimatization
Bicycling
Climate
Microbiota
Medical Microbiology
Evolutionary biology
spellingShingle Microbiology
Biological Sciences
Ecology
Aetiology
2.2 Factors relating to the physical environment
Infection
Antarctic Regions
Acclimatization
Bicycling
Climate
Microbiota
Medical Microbiology
Evolutionary biology
Ettinger, Cassandra L
Saunders, Morgan
Selbmann, Laura
Delgado-Baquerizo, Manuel
Donati, Claudio
Albanese, Davide
Roux, Simon
Tringe, Susannah
Pennacchio, Christa
del Rio, Tijana G
Stajich, Jason E
Coleine, Claudia
Highly diverse and unknown viruses may enhance Antarctic endoliths’ adaptability
topic_facet Microbiology
Biological Sciences
Ecology
Aetiology
2.2 Factors relating to the physical environment
Infection
Antarctic Regions
Acclimatization
Bicycling
Climate
Microbiota
Medical Microbiology
Evolutionary biology
description BackgroundRock-dwelling microorganisms are key players in ecosystem functioning of Antarctic ice free-areas. Yet, little is known about their diversity and ecology, and further still, viruses in these communities have been largely unexplored despite important roles related to host metabolism and nutrient cycling. To begin to address this, we present a large-scale viral catalog from Antarctic rock microbial communities.ResultsWe performed metagenomic analyses on rocks from across Antarctica representing a broad range of environmental and spatial conditions, and which resulted in a predicted viral catalog comprising > 75,000 viral operational taxonomic units (vOTUS). We found largely undescribed, highly diverse and spatially structured virus communities which had predicted auxiliary metabolic genes (AMGs) with functions indicating that they may be potentially influencing bacterial adaptation and biogeochemistry.ConclusionThis catalog lays the foundation for expanding knowledge of virosphere diversity, function, spatial ecology, and dynamics in extreme environments. This work serves as a step towards exploring adaptability of microbial communities in the face of a changing climate. Video Abstract.
format Article in Journal/Newspaper
author Ettinger, Cassandra L
Saunders, Morgan
Selbmann, Laura
Delgado-Baquerizo, Manuel
Donati, Claudio
Albanese, Davide
Roux, Simon
Tringe, Susannah
Pennacchio, Christa
del Rio, Tijana G
Stajich, Jason E
Coleine, Claudia
author_facet Ettinger, Cassandra L
Saunders, Morgan
Selbmann, Laura
Delgado-Baquerizo, Manuel
Donati, Claudio
Albanese, Davide
Roux, Simon
Tringe, Susannah
Pennacchio, Christa
del Rio, Tijana G
Stajich, Jason E
Coleine, Claudia
author_sort Ettinger, Cassandra L
title Highly diverse and unknown viruses may enhance Antarctic endoliths’ adaptability
title_short Highly diverse and unknown viruses may enhance Antarctic endoliths’ adaptability
title_full Highly diverse and unknown viruses may enhance Antarctic endoliths’ adaptability
title_fullStr Highly diverse and unknown viruses may enhance Antarctic endoliths’ adaptability
title_full_unstemmed Highly diverse and unknown viruses may enhance Antarctic endoliths’ adaptability
title_sort highly diverse and unknown viruses may enhance antarctic endoliths’ adaptability
publisher eScholarship, University of California
publishDate 2023
url https://escholarship.org/uc/item/65p0p1x8
op_coverage 103
geographic Antarctic
geographic_facet Antarctic
genre Antarc*
Antarctic
Antarctica
genre_facet Antarc*
Antarctic
Antarctica
op_source Microbiome, vol 11, iss 1
op_relation qt65p0p1x8
https://escholarship.org/uc/item/65p0p1x8
op_rights CC-BY
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