Improved High-Quality Draft Genome Sequence of the Eurypsychrophile Rhodotorula sp. JG1b, Isolated from Permafrost in the Hyperarid Upper-Elevation McMurdo Dry Valleys, Antarctica

Here, we report the draft genome sequence of Rhodotorula sp. strain JG1b, a yeast that was isolated from ice-cemented permafrost in the upper-elevation McMurdo Dry Valleys, Antarctica. The sequenced genome size is 19.39Mb, consisting of 156 scaffolds and containing a total of 5,625 predicted genes....

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Main Authors: Goordial, Jacqueline, Raymond-Bouchard, Isabelle, Riley, Robert, Ronholm, Jennifer, Shapiro, Nicole, Woyke, Tanja, LaButti, Kurt M, Tice, Hope, Amirebrahimi, Mojgan, Grigoriev, Igor V, Greer, Charles, Bakermans, Corien, Whyte, Lyle
Format: Article in Journal/Newspaper
Language:unknown
Published: eScholarship, University of California 2016
Subjects:
Microbiology
Biological Sciences
Genetics
Biochemistry and Cell Biology
McMurdo Dry Valleys
Antarc*
Antarctica
Ice
permafrost
Online Access:https://escholarship.org/uc/item/0n13x6ps
id ftcdlib:oai:escholarship.org:ark:/13030/qt0n13x6ps
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spelling ftcdlib:oai:escholarship.org:ark:/13030/qt0n13x6ps 2024-01-07T09:40:10+01:00 Improved High-Quality Draft Genome Sequence of the Eurypsychrophile Rhodotorula sp. JG1b, Isolated from Permafrost in the Hyperarid Upper-Elevation McMurdo Dry Valleys, Antarctica Goordial, Jacqueline Raymond-Bouchard, Isabelle Riley, Robert Ronholm, Jennifer Shapiro, Nicole Woyke, Tanja LaButti, Kurt M Tice, Hope Amirebrahimi, Mojgan Grigoriev, Igor V Greer, Charles Bakermans, Corien Whyte, Lyle e00069 - e00016 2016-04-28 application/pdf https://escholarship.org/uc/item/0n13x6ps unknown eScholarship, University of California qt0n13x6ps https://escholarship.org/uc/item/0n13x6ps public Microbiology Resource Announcements, vol 4, iss 2 Microbiology Biological Sciences Genetics Biochemistry and Cell Biology article 2016 ftcdlib 2023-12-11T19:07:21Z Here, we report the draft genome sequence of Rhodotorula sp. strain JG1b, a yeast that was isolated from ice-cemented permafrost in the upper-elevation McMurdo Dry Valleys, Antarctica. The sequenced genome size is 19.39Mb, consisting of 156 scaffolds and containing a total of 5,625 predicted genes. This is the first known cold-adapted Rhodotorula sp. sequenced to date. Article in Journal/Newspaper Antarc* Antarctica Ice McMurdo Dry Valleys permafrost University of California: eScholarship McMurdo Dry Valleys
institution Open Polar
collection University of California: eScholarship
op_collection_id ftcdlib
language unknown
topic Microbiology
Biological Sciences
Genetics
Biochemistry and Cell Biology
spellingShingle Microbiology
Biological Sciences
Genetics
Biochemistry and Cell Biology
Goordial, Jacqueline
Raymond-Bouchard, Isabelle
Riley, Robert
Ronholm, Jennifer
Shapiro, Nicole
Woyke, Tanja
LaButti, Kurt M
Tice, Hope
Amirebrahimi, Mojgan
Grigoriev, Igor V
Greer, Charles
Bakermans, Corien
Whyte, Lyle
Improved High-Quality Draft Genome Sequence of the Eurypsychrophile Rhodotorula sp. JG1b, Isolated from Permafrost in the Hyperarid Upper-Elevation McMurdo Dry Valleys, Antarctica
topic_facet Microbiology
Biological Sciences
Genetics
Biochemistry and Cell Biology
description Here, we report the draft genome sequence of Rhodotorula sp. strain JG1b, a yeast that was isolated from ice-cemented permafrost in the upper-elevation McMurdo Dry Valleys, Antarctica. The sequenced genome size is 19.39Mb, consisting of 156 scaffolds and containing a total of 5,625 predicted genes. This is the first known cold-adapted Rhodotorula sp. sequenced to date.
format Article in Journal/Newspaper
author Goordial, Jacqueline
Raymond-Bouchard, Isabelle
Riley, Robert
Ronholm, Jennifer
Shapiro, Nicole
Woyke, Tanja
LaButti, Kurt M
Tice, Hope
Amirebrahimi, Mojgan
Grigoriev, Igor V
Greer, Charles
Bakermans, Corien
Whyte, Lyle
author_facet Goordial, Jacqueline
Raymond-Bouchard, Isabelle
Riley, Robert
Ronholm, Jennifer
Shapiro, Nicole
Woyke, Tanja
LaButti, Kurt M
Tice, Hope
Amirebrahimi, Mojgan
Grigoriev, Igor V
Greer, Charles
Bakermans, Corien
Whyte, Lyle
author_sort Goordial, Jacqueline
title Improved High-Quality Draft Genome Sequence of the Eurypsychrophile Rhodotorula sp. JG1b, Isolated from Permafrost in the Hyperarid Upper-Elevation McMurdo Dry Valleys, Antarctica
title_short Improved High-Quality Draft Genome Sequence of the Eurypsychrophile Rhodotorula sp. JG1b, Isolated from Permafrost in the Hyperarid Upper-Elevation McMurdo Dry Valleys, Antarctica
title_full Improved High-Quality Draft Genome Sequence of the Eurypsychrophile Rhodotorula sp. JG1b, Isolated from Permafrost in the Hyperarid Upper-Elevation McMurdo Dry Valleys, Antarctica
title_fullStr Improved High-Quality Draft Genome Sequence of the Eurypsychrophile Rhodotorula sp. JG1b, Isolated from Permafrost in the Hyperarid Upper-Elevation McMurdo Dry Valleys, Antarctica
title_full_unstemmed Improved High-Quality Draft Genome Sequence of the Eurypsychrophile Rhodotorula sp. JG1b, Isolated from Permafrost in the Hyperarid Upper-Elevation McMurdo Dry Valleys, Antarctica
title_sort improved high-quality draft genome sequence of the eurypsychrophile rhodotorula sp. jg1b, isolated from permafrost in the hyperarid upper-elevation mcmurdo dry valleys, antarctica
publisher eScholarship, University of California
publishDate 2016
url https://escholarship.org/uc/item/0n13x6ps
op_coverage e00069 - e00016
geographic McMurdo Dry Valleys
geographic_facet McMurdo Dry Valleys
genre Antarc*
Antarctica
Ice
McMurdo Dry Valleys
permafrost
genre_facet Antarc*
Antarctica
Ice
McMurdo Dry Valleys
permafrost
op_source Microbiology Resource Announcements, vol 4, iss 2
op_relation qt0n13x6ps
https://escholarship.org/uc/item/0n13x6ps
op_rights public
_version_ 1787420739256713216

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