Diazotroph Diversity in the Sea Ice, Melt Ponds, and Surface Waters of the Eurasian Basin of the Central Arctic Ocean.

The Eurasian basin of the Central Arctic Ocean is nitrogen limited, but little is known about the presence and role of nitrogen-fixing bacteria. Recent studies have indicated the occurrence of diazotrophs in Arctic coastal waters potentially of riverine origin. Here, we investigated the presence of...

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Main Authors: Fernández-Méndez, Mar, Turk-Kubo, Kendra A, Buttigieg, Pier L, Rapp, Josephine Z, Krumpen, Thomas, Zehr, Jonathan P, Boetius, Antje
Format: Article in Journal/Newspaper
Language:unknown
Published: eScholarship, University of California 2016
Subjects:
Online Access:https://escholarship.org/uc/item/8bs116nd
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spelling ftcdlib:oai:escholarship.org/ark:/13030/qt8bs116nd 2023-05-15T13:33:01+02:00 Diazotroph Diversity in the Sea Ice, Melt Ponds, and Surface Waters of the Eurasian Basin of the Central Arctic Ocean. Fernández-Méndez, Mar Turk-Kubo, Kendra A Buttigieg, Pier L Rapp, Josephine Z Krumpen, Thomas Zehr, Jonathan P Boetius, Antje 2016-01-01 https://escholarship.org/uc/item/8bs116nd unknown eScholarship, University of California qt8bs116nd https://escholarship.org/uc/item/8bs116nd public Arctic bacterial diversity nifH nitrogen fixation non-cyanobacterial diazotrophs sea ice nitrogenfixation Microbiology Environmental Science and Management Soil Sciences article 2016 ftcdlib 2021-02-18T15:15:15Z The Eurasian basin of the Central Arctic Ocean is nitrogen limited, but little is known about the presence and role of nitrogen-fixing bacteria. Recent studies have indicated the occurrence of diazotrophs in Arctic coastal waters potentially of riverine origin. Here, we investigated the presence of diazotrophs in ice and surface waters of the Central Arctic Ocean in the summer of 2012. We identified diverse communities of putative diazotrophs through targeted analysis of the nifH gene, which encodes the iron protein of the nitrogenase enzyme. We amplified 529 nifH sequences from 26 samples of Arctic melt ponds, sea ice and surface waters. These sequences resolved into 43 clusters at 92% amino acid sequence identity, most of which were non-cyanobacterial phylotypes from sea ice and water samples. One cyanobacterial phylotype related to Nodularia sp. was retrieved from sea ice, suggesting that this important functional group is rare in the Central Arctic Ocean. The diazotrophic community in sea-ice environments appear distinct from other cold-adapted diazotrophic communities, such as those present in the coastal Canadian Arctic, the Arctic tundra and glacial Antarctic lakes. Molecular fingerprinting of nifH and the intergenic spacer region of the rRNA operon revealed differences between the communities from river-influenced Laptev Sea waters and those from ice-related environments pointing toward a marine origin for sea-ice diazotrophs. Our results provide the first record of diazotrophs in the Central Arctic and suggest that microbial nitrogen fixation may occur north of 77°N. To assess the significance of nitrogen fixation for the nitrogen budget of the Arctic Ocean and to identify the active nitrogen fixers, further biogeochemical and molecular biological studies are needed. Article in Journal/Newspaper Antarc* Antarctic Arctic Arctic Ocean laptev Laptev Sea Sea ice Tundra University of California: eScholarship Antarctic Arctic Arctic Ocean Laptev Sea
institution Open Polar
collection University of California: eScholarship
op_collection_id ftcdlib
language unknown
topic Arctic
bacterial diversity
nifH
nitrogen fixation
non-cyanobacterial diazotrophs
sea ice
nitrogenfixation
Microbiology
Environmental Science and Management
Soil Sciences
spellingShingle Arctic
bacterial diversity
nifH
nitrogen fixation
non-cyanobacterial diazotrophs
sea ice
nitrogenfixation
Microbiology
Environmental Science and Management
Soil Sciences
Fernández-Méndez, Mar
Turk-Kubo, Kendra A
Buttigieg, Pier L
Rapp, Josephine Z
Krumpen, Thomas
Zehr, Jonathan P
Boetius, Antje
Diazotroph Diversity in the Sea Ice, Melt Ponds, and Surface Waters of the Eurasian Basin of the Central Arctic Ocean.
topic_facet Arctic
bacterial diversity
nifH
nitrogen fixation
non-cyanobacterial diazotrophs
sea ice
nitrogenfixation
Microbiology
Environmental Science and Management
Soil Sciences
description The Eurasian basin of the Central Arctic Ocean is nitrogen limited, but little is known about the presence and role of nitrogen-fixing bacteria. Recent studies have indicated the occurrence of diazotrophs in Arctic coastal waters potentially of riverine origin. Here, we investigated the presence of diazotrophs in ice and surface waters of the Central Arctic Ocean in the summer of 2012. We identified diverse communities of putative diazotrophs through targeted analysis of the nifH gene, which encodes the iron protein of the nitrogenase enzyme. We amplified 529 nifH sequences from 26 samples of Arctic melt ponds, sea ice and surface waters. These sequences resolved into 43 clusters at 92% amino acid sequence identity, most of which were non-cyanobacterial phylotypes from sea ice and water samples. One cyanobacterial phylotype related to Nodularia sp. was retrieved from sea ice, suggesting that this important functional group is rare in the Central Arctic Ocean. The diazotrophic community in sea-ice environments appear distinct from other cold-adapted diazotrophic communities, such as those present in the coastal Canadian Arctic, the Arctic tundra and glacial Antarctic lakes. Molecular fingerprinting of nifH and the intergenic spacer region of the rRNA operon revealed differences between the communities from river-influenced Laptev Sea waters and those from ice-related environments pointing toward a marine origin for sea-ice diazotrophs. Our results provide the first record of diazotrophs in the Central Arctic and suggest that microbial nitrogen fixation may occur north of 77°N. To assess the significance of nitrogen fixation for the nitrogen budget of the Arctic Ocean and to identify the active nitrogen fixers, further biogeochemical and molecular biological studies are needed.
format Article in Journal/Newspaper
author Fernández-Méndez, Mar
Turk-Kubo, Kendra A
Buttigieg, Pier L
Rapp, Josephine Z
Krumpen, Thomas
Zehr, Jonathan P
Boetius, Antje
author_facet Fernández-Méndez, Mar
Turk-Kubo, Kendra A
Buttigieg, Pier L
Rapp, Josephine Z
Krumpen, Thomas
Zehr, Jonathan P
Boetius, Antje
author_sort Fernández-Méndez, Mar
title Diazotroph Diversity in the Sea Ice, Melt Ponds, and Surface Waters of the Eurasian Basin of the Central Arctic Ocean.
title_short Diazotroph Diversity in the Sea Ice, Melt Ponds, and Surface Waters of the Eurasian Basin of the Central Arctic Ocean.
title_full Diazotroph Diversity in the Sea Ice, Melt Ponds, and Surface Waters of the Eurasian Basin of the Central Arctic Ocean.
title_fullStr Diazotroph Diversity in the Sea Ice, Melt Ponds, and Surface Waters of the Eurasian Basin of the Central Arctic Ocean.
title_full_unstemmed Diazotroph Diversity in the Sea Ice, Melt Ponds, and Surface Waters of the Eurasian Basin of the Central Arctic Ocean.
title_sort diazotroph diversity in the sea ice, melt ponds, and surface waters of the eurasian basin of the central arctic ocean.
publisher eScholarship, University of California
publishDate 2016
url https://escholarship.org/uc/item/8bs116nd
geographic Antarctic
Arctic
Arctic Ocean
Laptev Sea
geographic_facet Antarctic
Arctic
Arctic Ocean
Laptev Sea
genre Antarc*
Antarctic
Arctic
Arctic Ocean
laptev
Laptev Sea
Sea ice
Tundra
genre_facet Antarc*
Antarctic
Arctic
Arctic Ocean
laptev
Laptev Sea
Sea ice
Tundra
op_relation qt8bs116nd
https://escholarship.org/uc/item/8bs116nd
op_rights public
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