Tundra microbial community taxa and traits predict decomposition parameters of stable, old soil organic carbon.

The susceptibility of soil organic carbon (SOC) in tundra to microbial decomposition under warmer climate scenarios potentially threatens a massive positive feedback to climate change, but the underlying mechanisms of stable SOC decomposition remain elusive. Herein, Alaskan tundra soils from three d...

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Main Authors: Hale, Lauren, Feng, Wenting, Yin, Huaqun, Guo, Xue, Zhou, Xishu, Bracho, Rosvel, Pegoraro, Elaine, Penton, C Ryan, Wu, Liyou, Cole, James, Konstantinidis, Konstantinos T, Luo, Yiqi, Tiedje, James M, Schuur, Edward AG, Zhou, Jizhong
Format: Article in Journal/Newspaper
Language:unknown
Published: eScholarship, University of California 2019
Subjects:
Online Access:https://escholarship.org/uc/item/26802914
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spelling ftcdlib:oai:escholarship.org/ark:/13030/qt26802914 2023-05-15T17:57:32+02:00 Tundra microbial community taxa and traits predict decomposition parameters of stable, old soil organic carbon. Hale, Lauren Feng, Wenting Yin, Huaqun Guo, Xue Zhou, Xishu Bracho, Rosvel Pegoraro, Elaine Penton, C Ryan Wu, Liyou Cole, James Konstantinidis, Konstantinos T Luo, Yiqi Tiedje, James M Schuur, Edward AG Zhou, Jizhong 2901 - 2915 2019-12-01 application/pdf https://escholarship.org/uc/item/26802914 unknown eScholarship, University of California qt26802914 https://escholarship.org/uc/item/26802914 public The ISME journal, vol 13, iss 12 Bacteria Fungi Archaea Carbon Soil Soil Microbiology Climate Change Microbiota Tundra Permafrost Biological Sciences Technology Environmental Sciences Microbiology article 2019 ftcdlib 2020-11-01T11:23:07Z The susceptibility of soil organic carbon (SOC) in tundra to microbial decomposition under warmer climate scenarios potentially threatens a massive positive feedback to climate change, but the underlying mechanisms of stable SOC decomposition remain elusive. Herein, Alaskan tundra soils from three depths (a fibric O horizon with litter and course roots, an O horizon with decomposing litter and roots, and a mineral-organic mix, laying just above the permafrost) were incubated. Resulting respiration data were assimilated into a 3-pool model to derive decomposition kinetic parameters for fast, slow, and passive SOC pools. Bacterial, archaeal, and fungal taxa and microbial functional genes were profiled throughout the 3-year incubation. Correlation analyses and a Random Forest approach revealed associations between model parameters and microbial community profiles, taxa, and traits. There were more associations between the microbial community data and the SOC decomposition parameters of slow and passive SOC pools than those of the fast SOC pool. Also, microbial community profiles were better predictors of model parameters in deeper soils, which had higher mineral contents and relatively greater quantities of old SOC than in surface soils. Overall, our analyses revealed the functional potential of microbial communities to decompose tundra SOC through a suite of specialized genes and taxa. These results portray divergent strategies by which microbial communities access SOC pools across varying depths, lending mechanistic insights into the vulnerability of what is considered stable SOC in tundra regions. Article in Journal/Newspaper permafrost Tundra University of California: eScholarship
institution Open Polar
collection University of California: eScholarship
op_collection_id ftcdlib
language unknown
topic Bacteria
Fungi
Archaea
Carbon
Soil
Soil Microbiology
Climate Change
Microbiota
Tundra
Permafrost
Biological Sciences
Technology
Environmental Sciences
Microbiology
spellingShingle Bacteria
Fungi
Archaea
Carbon
Soil
Soil Microbiology
Climate Change
Microbiota
Tundra
Permafrost
Biological Sciences
Technology
Environmental Sciences
Microbiology
Hale, Lauren
Feng, Wenting
Yin, Huaqun
Guo, Xue
Zhou, Xishu
Bracho, Rosvel
Pegoraro, Elaine
Penton, C Ryan
Wu, Liyou
Cole, James
Konstantinidis, Konstantinos T
Luo, Yiqi
Tiedje, James M
Schuur, Edward AG
Zhou, Jizhong
Tundra microbial community taxa and traits predict decomposition parameters of stable, old soil organic carbon.
topic_facet Bacteria
Fungi
Archaea
Carbon
Soil
Soil Microbiology
Climate Change
Microbiota
Tundra
Permafrost
Biological Sciences
Technology
Environmental Sciences
Microbiology
description The susceptibility of soil organic carbon (SOC) in tundra to microbial decomposition under warmer climate scenarios potentially threatens a massive positive feedback to climate change, but the underlying mechanisms of stable SOC decomposition remain elusive. Herein, Alaskan tundra soils from three depths (a fibric O horizon with litter and course roots, an O horizon with decomposing litter and roots, and a mineral-organic mix, laying just above the permafrost) were incubated. Resulting respiration data were assimilated into a 3-pool model to derive decomposition kinetic parameters for fast, slow, and passive SOC pools. Bacterial, archaeal, and fungal taxa and microbial functional genes were profiled throughout the 3-year incubation. Correlation analyses and a Random Forest approach revealed associations between model parameters and microbial community profiles, taxa, and traits. There were more associations between the microbial community data and the SOC decomposition parameters of slow and passive SOC pools than those of the fast SOC pool. Also, microbial community profiles were better predictors of model parameters in deeper soils, which had higher mineral contents and relatively greater quantities of old SOC than in surface soils. Overall, our analyses revealed the functional potential of microbial communities to decompose tundra SOC through a suite of specialized genes and taxa. These results portray divergent strategies by which microbial communities access SOC pools across varying depths, lending mechanistic insights into the vulnerability of what is considered stable SOC in tundra regions.
format Article in Journal/Newspaper
author Hale, Lauren
Feng, Wenting
Yin, Huaqun
Guo, Xue
Zhou, Xishu
Bracho, Rosvel
Pegoraro, Elaine
Penton, C Ryan
Wu, Liyou
Cole, James
Konstantinidis, Konstantinos T
Luo, Yiqi
Tiedje, James M
Schuur, Edward AG
Zhou, Jizhong
author_facet Hale, Lauren
Feng, Wenting
Yin, Huaqun
Guo, Xue
Zhou, Xishu
Bracho, Rosvel
Pegoraro, Elaine
Penton, C Ryan
Wu, Liyou
Cole, James
Konstantinidis, Konstantinos T
Luo, Yiqi
Tiedje, James M
Schuur, Edward AG
Zhou, Jizhong
author_sort Hale, Lauren
title Tundra microbial community taxa and traits predict decomposition parameters of stable, old soil organic carbon.
title_short Tundra microbial community taxa and traits predict decomposition parameters of stable, old soil organic carbon.
title_full Tundra microbial community taxa and traits predict decomposition parameters of stable, old soil organic carbon.
title_fullStr Tundra microbial community taxa and traits predict decomposition parameters of stable, old soil organic carbon.
title_full_unstemmed Tundra microbial community taxa and traits predict decomposition parameters of stable, old soil organic carbon.
title_sort tundra microbial community taxa and traits predict decomposition parameters of stable, old soil organic carbon.
publisher eScholarship, University of California
publishDate 2019
url https://escholarship.org/uc/item/26802914
op_coverage 2901 - 2915
genre permafrost
Tundra
genre_facet permafrost
Tundra
op_source The ISME journal, vol 13, iss 12
op_relation qt26802914
https://escholarship.org/uc/item/26802914
op_rights public
_version_ 1766165985731018752