Snow Microorganisms Colonise Arctic Soils Following Snow Melt
Arctic soils are constantly subjected to microbial invasion from either airborne, marine, or animal sources, which may impact local microbial communities and ecosystem functioning. However, in winter, Arctic soils are isolated from outside sources other than snow, which is the sole source of microor...
Published in: | Microbial Ecology |
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Format: | Article in Journal/Newspaper |
Language: | English |
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HAL CCSD
2023
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Online Access: | https://hal.science/hal-04291429 https://hal.science/hal-04291429/document https://hal.science/hal-04291429/file/s00248-023-02204-y.pdf https://doi.org/10.1007/s00248-023-02204-y |
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ftccsdartic:oai:HAL:hal-04291429v1 2024-02-11T09:59:59+01:00 Snow Microorganisms Colonise Arctic Soils Following Snow Melt Malard, Lucie, A Bergk-Pinto, Benoit Layton, Rose Vogel, Timothy, M Larose, Catherine Pearce, David, A University of Northumbria at Newcastle United Kingdom Université de Lausanne = University of Lausanne (UNIL) Ampère, Département Bioingénierie (BioIng) Ampère (AMPERE) École Centrale de Lyon (ECL) Université de Lyon-Université de Lyon-Université Claude Bernard Lyon 1 (UCBL) Université de Lyon-Institut National des Sciences Appliquées de Lyon (INSA Lyon) Université de Lyon-Institut National des Sciences Appliquées (INSA)-Institut National des Sciences Appliquées (INSA)-Centre National de la Recherche Scientifique (CNRS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-École Centrale de Lyon (ECL) Université de Lyon-Institut National des Sciences Appliquées (INSA)-Institut National des Sciences Appliquées (INSA)-Centre National de la Recherche Scientifique (CNRS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE) Sciensano Bruxelles Réseau International des Instituts Pasteur (RIIP) 2023-03-20 https://hal.science/hal-04291429 https://hal.science/hal-04291429/document https://hal.science/hal-04291429/file/s00248-023-02204-y.pdf https://doi.org/10.1007/s00248-023-02204-y en eng HAL CCSD Springer Verlag info:eu-repo/semantics/altIdentifier/doi/10.1007/s00248-023-02204-y hal-04291429 https://hal.science/hal-04291429 https://hal.science/hal-04291429/document https://hal.science/hal-04291429/file/s00248-023-02204-y.pdf doi:10.1007/s00248-023-02204-y info:eu-repo/semantics/OpenAccess ISSN: 0095-3628 EISSN: 1432-184X Microbial ecology https://hal.science/hal-04291429 Microbial ecology, 2023, 86 (3), pp.1661-1675. ⟨10.1007/s00248-023-02204-y⟩ Microbial colonisation Airborne dispersal Coalescence Snow Soils Arctic ecosystems Bacterial diversity Microbial colonisation Airborne dispersal Coalescence Snow Soils Arctic ecosystems Bacterial diversity [SDV]Life Sciences [q-bio] info:eu-repo/semantics/article Journal articles 2023 ftccsdartic https://doi.org/10.1007/s00248-023-02204-y 2024-01-13T23:47:23Z Arctic soils are constantly subjected to microbial invasion from either airborne, marine, or animal sources, which may impact local microbial communities and ecosystem functioning. However, in winter, Arctic soils are isolated from outside sources other than snow, which is the sole source of microorganisms. Successful colonisation of soil by snow microorganisms depends on the ability to survive and compete of both, the invading and resident community. Using shallow shotgun metagenome sequencing and amplicon sequencing, this study monitored snow and soil microbial communities throughout snow melt to investigate the colonisation process of Arctic soils. Microbial colonisation likely occurred as all the characteristics of successful colonisation were observed. The colonising microorganisms originating from the snow were already adapted to the local environmental conditions and were subsequently subjected to many similar conditions in the Arctic soil. Furthermore, competition-related genes (e.g. motility and virulence) increased in snow samples as the snow melted. Overall, one hundred potentially successful colonisers were identified in the soil and, thus, demonstrated the deposition and growth of snow microorganisms in soils during melt. Article in Journal/Newspaper Arctic Archive ouverte HAL (Hyper Article en Ligne, CCSD - Centre pour la Communication Scientifique Directe) Arctic Microbial Ecology 86 3 1661 1675 |
institution |
Open Polar |
collection |
Archive ouverte HAL (Hyper Article en Ligne, CCSD - Centre pour la Communication Scientifique Directe) |
op_collection_id |
ftccsdartic |
language |
English |
topic |
Microbial colonisation Airborne dispersal Coalescence Snow Soils Arctic ecosystems Bacterial diversity Microbial colonisation Airborne dispersal Coalescence Snow Soils Arctic ecosystems Bacterial diversity [SDV]Life Sciences [q-bio] |
spellingShingle |
Microbial colonisation Airborne dispersal Coalescence Snow Soils Arctic ecosystems Bacterial diversity Microbial colonisation Airborne dispersal Coalescence Snow Soils Arctic ecosystems Bacterial diversity [SDV]Life Sciences [q-bio] Malard, Lucie, A Bergk-Pinto, Benoit Layton, Rose Vogel, Timothy, M Larose, Catherine Pearce, David, A Snow Microorganisms Colonise Arctic Soils Following Snow Melt |
topic_facet |
Microbial colonisation Airborne dispersal Coalescence Snow Soils Arctic ecosystems Bacterial diversity Microbial colonisation Airborne dispersal Coalescence Snow Soils Arctic ecosystems Bacterial diversity [SDV]Life Sciences [q-bio] |
description |
Arctic soils are constantly subjected to microbial invasion from either airborne, marine, or animal sources, which may impact local microbial communities and ecosystem functioning. However, in winter, Arctic soils are isolated from outside sources other than snow, which is the sole source of microorganisms. Successful colonisation of soil by snow microorganisms depends on the ability to survive and compete of both, the invading and resident community. Using shallow shotgun metagenome sequencing and amplicon sequencing, this study monitored snow and soil microbial communities throughout snow melt to investigate the colonisation process of Arctic soils. Microbial colonisation likely occurred as all the characteristics of successful colonisation were observed. The colonising microorganisms originating from the snow were already adapted to the local environmental conditions and were subsequently subjected to many similar conditions in the Arctic soil. Furthermore, competition-related genes (e.g. motility and virulence) increased in snow samples as the snow melted. Overall, one hundred potentially successful colonisers were identified in the soil and, thus, demonstrated the deposition and growth of snow microorganisms in soils during melt. |
author2 |
University of Northumbria at Newcastle United Kingdom Université de Lausanne = University of Lausanne (UNIL) Ampère, Département Bioingénierie (BioIng) Ampère (AMPERE) École Centrale de Lyon (ECL) Université de Lyon-Université de Lyon-Université Claude Bernard Lyon 1 (UCBL) Université de Lyon-Institut National des Sciences Appliquées de Lyon (INSA Lyon) Université de Lyon-Institut National des Sciences Appliquées (INSA)-Institut National des Sciences Appliquées (INSA)-Centre National de la Recherche Scientifique (CNRS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-École Centrale de Lyon (ECL) Université de Lyon-Institut National des Sciences Appliquées (INSA)-Institut National des Sciences Appliquées (INSA)-Centre National de la Recherche Scientifique (CNRS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE) Sciensano Bruxelles Réseau International des Instituts Pasteur (RIIP) |
format |
Article in Journal/Newspaper |
author |
Malard, Lucie, A Bergk-Pinto, Benoit Layton, Rose Vogel, Timothy, M Larose, Catherine Pearce, David, A |
author_facet |
Malard, Lucie, A Bergk-Pinto, Benoit Layton, Rose Vogel, Timothy, M Larose, Catherine Pearce, David, A |
author_sort |
Malard, Lucie, A |
title |
Snow Microorganisms Colonise Arctic Soils Following Snow Melt |
title_short |
Snow Microorganisms Colonise Arctic Soils Following Snow Melt |
title_full |
Snow Microorganisms Colonise Arctic Soils Following Snow Melt |
title_fullStr |
Snow Microorganisms Colonise Arctic Soils Following Snow Melt |
title_full_unstemmed |
Snow Microorganisms Colonise Arctic Soils Following Snow Melt |
title_sort |
snow microorganisms colonise arctic soils following snow melt |
publisher |
HAL CCSD |
publishDate |
2023 |
url |
https://hal.science/hal-04291429 https://hal.science/hal-04291429/document https://hal.science/hal-04291429/file/s00248-023-02204-y.pdf https://doi.org/10.1007/s00248-023-02204-y |
geographic |
Arctic |
geographic_facet |
Arctic |
genre |
Arctic |
genre_facet |
Arctic |
op_source |
ISSN: 0095-3628 EISSN: 1432-184X Microbial ecology https://hal.science/hal-04291429 Microbial ecology, 2023, 86 (3), pp.1661-1675. ⟨10.1007/s00248-023-02204-y⟩ |
op_relation |
info:eu-repo/semantics/altIdentifier/doi/10.1007/s00248-023-02204-y hal-04291429 https://hal.science/hal-04291429 https://hal.science/hal-04291429/document https://hal.science/hal-04291429/file/s00248-023-02204-y.pdf doi:10.1007/s00248-023-02204-y |
op_rights |
info:eu-repo/semantics/OpenAccess |
op_doi |
https://doi.org/10.1007/s00248-023-02204-y |
container_title |
Microbial Ecology |
container_volume |
86 |
container_issue |
3 |
container_start_page |
1661 |
op_container_end_page |
1675 |
_version_ |
1790595706059227136 |