New insights into detecting alizarin from autofluorescence in marked glass eels
International audience Alizarin detection in fish fins is extensively employed because it is easy to use. However, in eels, the eelGFP fluorescent protein may impede the detection of the fluorescent markers in the eel tissues. The study tests the effectiveness of three of the most up-to-date alizari...
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Online Access: | https://cnrs.hal.science/hal-03798587 https://cnrs.hal.science/hal-03798587/document https://cnrs.hal.science/hal-03798587/file/Gaillard22.pdf https://doi.org/10.1038/s41598-022-18440-0 |
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ftccsdartic:oai:HAL:hal-03798587v1 2023-06-25T03:36:13+02:00 New insights into detecting alizarin from autofluorescence in marked glass eels Gaillard, Mélanie Parlanti, Edith Sourzac, Mahaut Couillaud, Franck Genevois, Coralie Boutry, Sébastien Rigaud, Christian Daverat, Françoise Ecosystèmes aquatiques et changements globaux (UR EABX) Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE) Environnements et Paléoenvironnements OCéaniques (EPOC) Observatoire aquitain des sciences de l'univers (OASU) Université Sciences et Technologies - Bordeaux 1 (UB)-Institut national des sciences de l'Univers (INSU - CNRS)-Centre National de la Recherche Scientifique (CNRS)-Université Sciences et Technologies - Bordeaux 1 (UB)-Institut national des sciences de l'Univers (INSU - CNRS)-Centre National de la Recherche Scientifique (CNRS)-École Pratique des Hautes Études (EPHE) Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-Centre National de la Recherche Scientifique (CNRS) Imagerie moléculaire et thérapies innovantes en oncologie (IMOTION) Université de Bordeaux (UB) 2022-12 https://cnrs.hal.science/hal-03798587 https://cnrs.hal.science/hal-03798587/document https://cnrs.hal.science/hal-03798587/file/Gaillard22.pdf https://doi.org/10.1038/s41598-022-18440-0 en eng HAL CCSD Nature Publishing Group info:eu-repo/semantics/altIdentifier/doi/10.1038/s41598-022-18440-0 hal-03798587 https://cnrs.hal.science/hal-03798587 https://cnrs.hal.science/hal-03798587/document https://cnrs.hal.science/hal-03798587/file/Gaillard22.pdf doi:10.1038/s41598-022-18440-0 WOS: 000860095400006 http://creativecommons.org/licenses/by/ info:eu-repo/semantics/OpenAccess ISSN: 2045-2322 EISSN: 2045-2322 Scientific Reports https://cnrs.hal.science/hal-03798587 Scientific Reports, 2022, 12 (1), pp.15985. ⟨10.1038/s41598-022-18440-0⟩ [CHIM]Chemical Sciences [SDE]Environmental Sciences info:eu-repo/semantics/article Journal articles 2022 ftccsdartic https://doi.org/10.1038/s41598-022-18440-0 2023-06-11T00:25:31Z International audience Alizarin detection in fish fins is extensively employed because it is easy to use. However, in eels, the eelGFP fluorescent protein may impede the detection of the fluorescent markers in the eel tissues. The study tests the effectiveness of three of the most up-to-date alizarin-detecting technologies on the living body and fins of European glass eels ( Anguilla anguilla L.). The findings demonstrated that the control group had a high autofluorescence at alizarin and eelGFP maxima bands. With fluorescence reflectance imaging (FRI), the eel living body autofluorescence impeded the detection of the marked eels. In contrast with experimental excitation-emission-matrix (EEM) fluorescence analyses, 99% of the marked eels were correctly assigned to their group from fluorescence analyses of their fin cellular contents. With epifluorometry (EPI), 100% of the marked eels were detected with the caudal fin tips when excited at 450–490 nm wavelengths due to a weaker autofluorescence signal. EEM and FRI assays unveiled an average fluorescence quenching 60% and 44% of the marked group respectively, in the alizarin and eelGFP maxima bands. The fluorescence quenching observed is discussed. Results will benefit experimental design by examining autofluorescence effects on mark detection and the development of non-invasive detection methods in this critically endangered species. Article in Journal/Newspaper Anguilla anguilla Archive ouverte HAL (Hyper Article en Ligne, CCSD - Centre pour la Communication Scientifique Directe) Scientific Reports 12 1 |
institution |
Open Polar |
collection |
Archive ouverte HAL (Hyper Article en Ligne, CCSD - Centre pour la Communication Scientifique Directe) |
op_collection_id |
ftccsdartic |
language |
English |
topic |
[CHIM]Chemical Sciences [SDE]Environmental Sciences |
spellingShingle |
[CHIM]Chemical Sciences [SDE]Environmental Sciences Gaillard, Mélanie Parlanti, Edith Sourzac, Mahaut Couillaud, Franck Genevois, Coralie Boutry, Sébastien Rigaud, Christian Daverat, Françoise New insights into detecting alizarin from autofluorescence in marked glass eels |
topic_facet |
[CHIM]Chemical Sciences [SDE]Environmental Sciences |
description |
International audience Alizarin detection in fish fins is extensively employed because it is easy to use. However, in eels, the eelGFP fluorescent protein may impede the detection of the fluorescent markers in the eel tissues. The study tests the effectiveness of three of the most up-to-date alizarin-detecting technologies on the living body and fins of European glass eels ( Anguilla anguilla L.). The findings demonstrated that the control group had a high autofluorescence at alizarin and eelGFP maxima bands. With fluorescence reflectance imaging (FRI), the eel living body autofluorescence impeded the detection of the marked eels. In contrast with experimental excitation-emission-matrix (EEM) fluorescence analyses, 99% of the marked eels were correctly assigned to their group from fluorescence analyses of their fin cellular contents. With epifluorometry (EPI), 100% of the marked eels were detected with the caudal fin tips when excited at 450–490 nm wavelengths due to a weaker autofluorescence signal. EEM and FRI assays unveiled an average fluorescence quenching 60% and 44% of the marked group respectively, in the alizarin and eelGFP maxima bands. The fluorescence quenching observed is discussed. Results will benefit experimental design by examining autofluorescence effects on mark detection and the development of non-invasive detection methods in this critically endangered species. |
author2 |
Ecosystèmes aquatiques et changements globaux (UR EABX) Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE) Environnements et Paléoenvironnements OCéaniques (EPOC) Observatoire aquitain des sciences de l'univers (OASU) Université Sciences et Technologies - Bordeaux 1 (UB)-Institut national des sciences de l'Univers (INSU - CNRS)-Centre National de la Recherche Scientifique (CNRS)-Université Sciences et Technologies - Bordeaux 1 (UB)-Institut national des sciences de l'Univers (INSU - CNRS)-Centre National de la Recherche Scientifique (CNRS)-École Pratique des Hautes Études (EPHE) Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-Centre National de la Recherche Scientifique (CNRS) Imagerie moléculaire et thérapies innovantes en oncologie (IMOTION) Université de Bordeaux (UB) |
format |
Article in Journal/Newspaper |
author |
Gaillard, Mélanie Parlanti, Edith Sourzac, Mahaut Couillaud, Franck Genevois, Coralie Boutry, Sébastien Rigaud, Christian Daverat, Françoise |
author_facet |
Gaillard, Mélanie Parlanti, Edith Sourzac, Mahaut Couillaud, Franck Genevois, Coralie Boutry, Sébastien Rigaud, Christian Daverat, Françoise |
author_sort |
Gaillard, Mélanie |
title |
New insights into detecting alizarin from autofluorescence in marked glass eels |
title_short |
New insights into detecting alizarin from autofluorescence in marked glass eels |
title_full |
New insights into detecting alizarin from autofluorescence in marked glass eels |
title_fullStr |
New insights into detecting alizarin from autofluorescence in marked glass eels |
title_full_unstemmed |
New insights into detecting alizarin from autofluorescence in marked glass eels |
title_sort |
new insights into detecting alizarin from autofluorescence in marked glass eels |
publisher |
HAL CCSD |
publishDate |
2022 |
url |
https://cnrs.hal.science/hal-03798587 https://cnrs.hal.science/hal-03798587/document https://cnrs.hal.science/hal-03798587/file/Gaillard22.pdf https://doi.org/10.1038/s41598-022-18440-0 |
genre |
Anguilla anguilla |
genre_facet |
Anguilla anguilla |
op_source |
ISSN: 2045-2322 EISSN: 2045-2322 Scientific Reports https://cnrs.hal.science/hal-03798587 Scientific Reports, 2022, 12 (1), pp.15985. ⟨10.1038/s41598-022-18440-0⟩ |
op_relation |
info:eu-repo/semantics/altIdentifier/doi/10.1038/s41598-022-18440-0 hal-03798587 https://cnrs.hal.science/hal-03798587 https://cnrs.hal.science/hal-03798587/document https://cnrs.hal.science/hal-03798587/file/Gaillard22.pdf doi:10.1038/s41598-022-18440-0 WOS: 000860095400006 |
op_rights |
http://creativecommons.org/licenses/by/ info:eu-repo/semantics/OpenAccess |
op_doi |
https://doi.org/10.1038/s41598-022-18440-0 |
container_title |
Scientific Reports |
container_volume |
12 |
container_issue |
1 |
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1769637062232768512 |