An open access dataset for developing automated detectors of Antarctic baleen whale sounds and performance evaluation of two commonly used detectors

International audience Since 2001, hundreds of thousands of hours of underwater acoustic recordings have been made throughout the Southern Ocean south of 60° S. Detailed analysis of the occurrence of marine mammal sounds in these circumpolar recordings could provide novel insights into their ecology...

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Published in:Scientific Reports
Main Authors: Miller, Brian, Balcazar, Naysa, Nieukirk, Sharon, Samaran, Flore, Leroy, Emmanuelle, Aulich, Meghan, Shabangu, Fannie, Dziak, Robert, Lee, Won, Hong, Jong
Other Authors: Australian Antarctic Division (AAD), Australian Government, Department of the Environment and Energy, Unaffiliated Researcher, NOAA Pacific Marine Environmental Laboratory Newport (PMEL), National Oceanic and Atmospheric Administration (NOAA), Equipe Observations Signal & Environnement (Lab-STICC_OSE), Laboratoire des sciences et techniques de l'information, de la communication et de la connaissance (Lab-STICC), École Nationale d'Ingénieurs de Brest (ENIB)-Université de Bretagne Sud (UBS)-Université de Brest (UBO)-École Nationale Supérieure de Techniques Avancées Bretagne (ENSTA Bretagne)-Institut Mines-Télécom Paris (IMT)-Centre National de la Recherche Scientifique (CNRS)-Université Bretagne Loire (UBL)-IMT Atlantique Bretagne-Pays de la Loire (IMT Atlantique), Institut Mines-Télécom Paris (IMT)-École Nationale d'Ingénieurs de Brest (ENIB)-Université de Bretagne Sud (UBS)-Université de Brest (UBO)-École Nationale Supérieure de Techniques Avancées Bretagne (ENSTA Bretagne)-Institut Mines-Télécom Paris (IMT)-Centre National de la Recherche Scientifique (CNRS)-Université Bretagne Loire (UBL)-IMT Atlantique Bretagne-Pays de la Loire (IMT Atlantique), Institut Mines-Télécom Paris (IMT), École Nationale Supérieure de Techniques Avancées Bretagne (ENSTA Bretagne), Curtin University Perth, Planning and Transport Research Centre (PATREC), Department of Agriculture, Forestry and Fisheries Cape Town, Afrique du Sud (DAFF), Korea Polar Research Institute (KOPRI)
Format: Article in Journal/Newspaper
Language:English
Published: HAL CCSD 2021
Subjects:
Online Access:https://hal-ensta-bretagne.archives-ouvertes.fr/hal-03127313
https://hal-ensta-bretagne.archives-ouvertes.fr/hal-03127313/document
https://hal-ensta-bretagne.archives-ouvertes.fr/hal-03127313/file/s41598-020-78995-8.pdf
https://doi.org/10.1038/s41598-020-78995-8
id ftccsdartic:oai:HAL:hal-03127313v1
record_format openpolar
institution Open Polar
collection Archive ouverte HAL (Hyper Article en Ligne, CCSD - Centre pour la Communication Scientifique Directe)
op_collection_id ftccsdartic
language English
topic Southern Ocean
Standardization
Sound
Detection algorithm
Antarctica
Signal processing
Comparative effectiveness
Fin whale
Non-human
[INFO.INFO-TS]Computer Science [cs]/Signal and Image Processing
[INFO.INFO-NI]Computer Science [cs]/Networking and Internet Architecture [cs.NI]
[PHYS.MECA.ACOU]Physics [physics]/Mechanics [physics]/Acoustics [physics.class-ph]
spellingShingle Southern Ocean
Standardization
Sound
Detection algorithm
Antarctica
Signal processing
Comparative effectiveness
Fin whale
Non-human
[INFO.INFO-TS]Computer Science [cs]/Signal and Image Processing
[INFO.INFO-NI]Computer Science [cs]/Networking and Internet Architecture [cs.NI]
[PHYS.MECA.ACOU]Physics [physics]/Mechanics [physics]/Acoustics [physics.class-ph]
Miller, Brian,
Balcazar, Naysa
Nieukirk, Sharon
Samaran, Flore
Leroy, Emmanuelle,
Aulich, Meghan
Shabangu, Fannie,
Dziak, Robert,
Lee, Won,
Hong, Jong
An open access dataset for developing automated detectors of Antarctic baleen whale sounds and performance evaluation of two commonly used detectors
topic_facet Southern Ocean
Standardization
Sound
Detection algorithm
Antarctica
Signal processing
Comparative effectiveness
Fin whale
Non-human
[INFO.INFO-TS]Computer Science [cs]/Signal and Image Processing
[INFO.INFO-NI]Computer Science [cs]/Networking and Internet Architecture [cs.NI]
[PHYS.MECA.ACOU]Physics [physics]/Mechanics [physics]/Acoustics [physics.class-ph]
description International audience Since 2001, hundreds of thousands of hours of underwater acoustic recordings have been made throughout the Southern Ocean south of 60° S. Detailed analysis of the occurrence of marine mammal sounds in these circumpolar recordings could provide novel insights into their ecology, but manual inspection of the entirety of all recordings would be prohibitively time consuming and expensive. Automated signal processing methods have now developed to the point that they can be applied to these data in a cost-effective manner. However training and evaluating the efficacy of these automated signal processing methods still requires a representative annotated library of sounds to identify the true presence and absence of different sound types. This work presents such a library of annotated recordings for the purpose of training and evaluating automated detectors of Antarctic blue and fin whale calls. Creation of the library has focused on the annotation of a representative sample of recordings to ensure that automated algorithms can be developed and tested across a broad range of instruments, locations, environmental conditions, and years. To demonstrate the utility of the library, we characterise the performance of two automated detection algorithms that have been commonly used to detect stereotyped calls of blue and fin whales. The availability of this library will facilitate development of improved detectors for the acoustic presence of Southern Ocean blue and fin whales. It can also be expanded upon to facilitate standardization of subsequent analysis of spatiotemporal trends in call-density of these circumpolar species.
author2 Australian Antarctic Division (AAD)
Australian Government, Department of the Environment and Energy
Unaffiliated Researcher
NOAA Pacific Marine Environmental Laboratory Newport (PMEL)
National Oceanic and Atmospheric Administration (NOAA)
Equipe Observations Signal & Environnement (Lab-STICC_OSE)
Laboratoire des sciences et techniques de l'information, de la communication et de la connaissance (Lab-STICC)
École Nationale d'Ingénieurs de Brest (ENIB)-Université de Bretagne Sud (UBS)-Université de Brest (UBO)-École Nationale Supérieure de Techniques Avancées Bretagne (ENSTA Bretagne)-Institut Mines-Télécom Paris (IMT)-Centre National de la Recherche Scientifique (CNRS)-Université Bretagne Loire (UBL)-IMT Atlantique Bretagne-Pays de la Loire (IMT Atlantique)
Institut Mines-Télécom Paris (IMT)-École Nationale d'Ingénieurs de Brest (ENIB)-Université de Bretagne Sud (UBS)-Université de Brest (UBO)-École Nationale Supérieure de Techniques Avancées Bretagne (ENSTA Bretagne)-Institut Mines-Télécom Paris (IMT)-Centre National de la Recherche Scientifique (CNRS)-Université Bretagne Loire (UBL)-IMT Atlantique Bretagne-Pays de la Loire (IMT Atlantique)
Institut Mines-Télécom Paris (IMT)
École Nationale Supérieure de Techniques Avancées Bretagne (ENSTA Bretagne)
Curtin University Perth
Planning and Transport Research Centre (PATREC)
Department of Agriculture, Forestry and Fisheries Cape Town, Afrique du Sud (DAFF)
Korea Polar Research Institute (KOPRI)
format Article in Journal/Newspaper
author Miller, Brian,
Balcazar, Naysa
Nieukirk, Sharon
Samaran, Flore
Leroy, Emmanuelle,
Aulich, Meghan
Shabangu, Fannie,
Dziak, Robert,
Lee, Won,
Hong, Jong
author_facet Miller, Brian,
Balcazar, Naysa
Nieukirk, Sharon
Samaran, Flore
Leroy, Emmanuelle,
Aulich, Meghan
Shabangu, Fannie,
Dziak, Robert,
Lee, Won,
Hong, Jong
author_sort Miller, Brian,
title An open access dataset for developing automated detectors of Antarctic baleen whale sounds and performance evaluation of two commonly used detectors
title_short An open access dataset for developing automated detectors of Antarctic baleen whale sounds and performance evaluation of two commonly used detectors
title_full An open access dataset for developing automated detectors of Antarctic baleen whale sounds and performance evaluation of two commonly used detectors
title_fullStr An open access dataset for developing automated detectors of Antarctic baleen whale sounds and performance evaluation of two commonly used detectors
title_full_unstemmed An open access dataset for developing automated detectors of Antarctic baleen whale sounds and performance evaluation of two commonly used detectors
title_sort open access dataset for developing automated detectors of antarctic baleen whale sounds and performance evaluation of two commonly used detectors
publisher HAL CCSD
publishDate 2021
url https://hal-ensta-bretagne.archives-ouvertes.fr/hal-03127313
https://hal-ensta-bretagne.archives-ouvertes.fr/hal-03127313/document
https://hal-ensta-bretagne.archives-ouvertes.fr/hal-03127313/file/s41598-020-78995-8.pdf
https://doi.org/10.1038/s41598-020-78995-8
geographic Antarctic
Southern Ocean
geographic_facet Antarctic
Southern Ocean
genre Antarc*
Antarctic
Antarctica
baleen whale
Fin whale
Southern Ocean
genre_facet Antarc*
Antarctic
Antarctica
baleen whale
Fin whale
Southern Ocean
op_source ISSN: 2045-2322
EISSN: 2045-2322
Scientific Reports
https://hal-ensta-bretagne.archives-ouvertes.fr/hal-03127313
Scientific Reports, Nature Publishing Group, 2021, 11 (806), ⟨10.1038/s41598-020-78995-8⟩
op_relation info:eu-repo/semantics/altIdentifier/doi/10.1038/s41598-020-78995-8
hal-03127313
https://hal-ensta-bretagne.archives-ouvertes.fr/hal-03127313
https://hal-ensta-bretagne.archives-ouvertes.fr/hal-03127313/document
https://hal-ensta-bretagne.archives-ouvertes.fr/hal-03127313/file/s41598-020-78995-8.pdf
doi:10.1038/s41598-020-78995-8
op_rights info:eu-repo/semantics/OpenAccess
op_doi https://doi.org/10.1038/s41598-020-78995-8
container_title Scientific Reports
container_volume 11
container_issue 1
_version_ 1766274657222131712
spelling ftccsdartic:oai:HAL:hal-03127313v1 2023-05-15T14:03:48+02:00 An open access dataset for developing automated detectors of Antarctic baleen whale sounds and performance evaluation of two commonly used detectors Miller, Brian, Balcazar, Naysa Nieukirk, Sharon Samaran, Flore Leroy, Emmanuelle, Aulich, Meghan Shabangu, Fannie, Dziak, Robert, Lee, Won, Hong, Jong Australian Antarctic Division (AAD) Australian Government, Department of the Environment and Energy Unaffiliated Researcher NOAA Pacific Marine Environmental Laboratory Newport (PMEL) National Oceanic and Atmospheric Administration (NOAA) Equipe Observations Signal & Environnement (Lab-STICC_OSE) Laboratoire des sciences et techniques de l'information, de la communication et de la connaissance (Lab-STICC) École Nationale d'Ingénieurs de Brest (ENIB)-Université de Bretagne Sud (UBS)-Université de Brest (UBO)-École Nationale Supérieure de Techniques Avancées Bretagne (ENSTA Bretagne)-Institut Mines-Télécom Paris (IMT)-Centre National de la Recherche Scientifique (CNRS)-Université Bretagne Loire (UBL)-IMT Atlantique Bretagne-Pays de la Loire (IMT Atlantique) Institut Mines-Télécom Paris (IMT)-École Nationale d'Ingénieurs de Brest (ENIB)-Université de Bretagne Sud (UBS)-Université de Brest (UBO)-École Nationale Supérieure de Techniques Avancées Bretagne (ENSTA Bretagne)-Institut Mines-Télécom Paris (IMT)-Centre National de la Recherche Scientifique (CNRS)-Université Bretagne Loire (UBL)-IMT Atlantique Bretagne-Pays de la Loire (IMT Atlantique) Institut Mines-Télécom Paris (IMT) École Nationale Supérieure de Techniques Avancées Bretagne (ENSTA Bretagne) Curtin University Perth Planning and Transport Research Centre (PATREC) Department of Agriculture, Forestry and Fisheries Cape Town, Afrique du Sud (DAFF) Korea Polar Research Institute (KOPRI) 2021 https://hal-ensta-bretagne.archives-ouvertes.fr/hal-03127313 https://hal-ensta-bretagne.archives-ouvertes.fr/hal-03127313/document https://hal-ensta-bretagne.archives-ouvertes.fr/hal-03127313/file/s41598-020-78995-8.pdf https://doi.org/10.1038/s41598-020-78995-8 en eng HAL CCSD Nature Publishing Group info:eu-repo/semantics/altIdentifier/doi/10.1038/s41598-020-78995-8 hal-03127313 https://hal-ensta-bretagne.archives-ouvertes.fr/hal-03127313 https://hal-ensta-bretagne.archives-ouvertes.fr/hal-03127313/document https://hal-ensta-bretagne.archives-ouvertes.fr/hal-03127313/file/s41598-020-78995-8.pdf doi:10.1038/s41598-020-78995-8 info:eu-repo/semantics/OpenAccess ISSN: 2045-2322 EISSN: 2045-2322 Scientific Reports https://hal-ensta-bretagne.archives-ouvertes.fr/hal-03127313 Scientific Reports, Nature Publishing Group, 2021, 11 (806), ⟨10.1038/s41598-020-78995-8⟩ Southern Ocean Standardization Sound Detection algorithm Antarctica Signal processing Comparative effectiveness Fin whale Non-human [INFO.INFO-TS]Computer Science [cs]/Signal and Image Processing [INFO.INFO-NI]Computer Science [cs]/Networking and Internet Architecture [cs.NI] [PHYS.MECA.ACOU]Physics [physics]/Mechanics [physics]/Acoustics [physics.class-ph] info:eu-repo/semantics/article Journal articles 2021 ftccsdartic https://doi.org/10.1038/s41598-020-78995-8 2021-10-16T22:59:50Z International audience Since 2001, hundreds of thousands of hours of underwater acoustic recordings have been made throughout the Southern Ocean south of 60° S. Detailed analysis of the occurrence of marine mammal sounds in these circumpolar recordings could provide novel insights into their ecology, but manual inspection of the entirety of all recordings would be prohibitively time consuming and expensive. Automated signal processing methods have now developed to the point that they can be applied to these data in a cost-effective manner. However training and evaluating the efficacy of these automated signal processing methods still requires a representative annotated library of sounds to identify the true presence and absence of different sound types. This work presents such a library of annotated recordings for the purpose of training and evaluating automated detectors of Antarctic blue and fin whale calls. Creation of the library has focused on the annotation of a representative sample of recordings to ensure that automated algorithms can be developed and tested across a broad range of instruments, locations, environmental conditions, and years. To demonstrate the utility of the library, we characterise the performance of two automated detection algorithms that have been commonly used to detect stereotyped calls of blue and fin whales. The availability of this library will facilitate development of improved detectors for the acoustic presence of Southern Ocean blue and fin whales. It can also be expanded upon to facilitate standardization of subsequent analysis of spatiotemporal trends in call-density of these circumpolar species. Article in Journal/Newspaper Antarc* Antarctic Antarctica baleen whale Fin whale Southern Ocean Archive ouverte HAL (Hyper Article en Ligne, CCSD - Centre pour la Communication Scientifique Directe) Antarctic Southern Ocean Scientific Reports 11 1