Hyperspectral Vegetation Indices Calculated by Qgis Using Landsat Tm Image: a Case Study of Northern Iceland

International audience The vegetation indices (VIs) derived from the hyperspectral reflectance of vegetation are presented in this study for monitoring live green vegetation in the northern ecosystems of Iceland, along the fjords of Eyjafjörður and the Skagafjörður. The comparative analysis of the f...

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Published in:Advanced Research in Life Sciences
Main Author: Lemenkova, Polina
Other Authors: Schmidt United Institute of Physics of the Earth Moscow (IPE), Russian Academy of Sciences Moscow (RAS)
Format: Article in Journal/Newspaper
Language:English
Published: HAL CCSD 2020
Subjects:
Online Access:https://hal.archives-ouvertes.fr/hal-03030414
https://hal.archives-ouvertes.fr/hal-03030414/document
https://hal.archives-ouvertes.fr/hal-03030414/file/25438050%20-%20Advanced%20Research%20in%20Life%20Sciences%20Hyperspectral%20Vegetation%20Indices.pdf
https://doi.org/10.2478/arls-2020-0021
id ftccsdartic:oai:HAL:hal-03030414v1
record_format openpolar
institution Open Polar
collection Archive ouverte HAL (Hyper Article en Ligne, CCSD - Centre pour la Communication Scientifique Directe)
op_collection_id ftccsdartic
language English
topic Landsat TM
QGIS
NDVI
Vegetation Index
Cartography
ACM: I.: Computing Methodologies
ACM: I.: Computing Methodologies/I.4: IMAGE PROCESSING AND COMPUTER VISION
ACM: I.: Computing Methodologies/I.4: IMAGE PROCESSING AND COMPUTER VISION/I.4.10: Image Representation
ACM: I.: Computing Methodologies/I.4: IMAGE PROCESSING AND COMPUTER VISION/I.4.6: Segmentation
ACM: I.: Computing Methodologies/I.5: PATTERN RECOGNITION
ACM: I.: Computing Methodologies/I.6: SIMULATION AND MODELING
ACM: K.: Computing Milieux/K.3: COMPUTERS AND EDUCATION
ACM: K.: Computing Milieux/K.8: PERSONAL COMPUTING
ACM: I.: Computing Methodologies/I.4: IMAGE PROCESSING AND COMPUTER VISION/I.4.0: General
ACM: I.: Computing Methodologies/I.4: IMAGE PROCESSING AND COMPUTER VISION/I.4.1: Digitization and Image Capture
ACM: I.: Computing Methodologies/I.4: IMAGE PROCESSING AND COMPUTER VISION/I.4.3: Enhancement
ACM: I.: Computing Methodologies/I.4: IMAGE PROCESSING AND COMPUTER VISION/I.4.2: Compression (Coding)
ACM: I.: Computing Methodologies/I.4: IMAGE PROCESSING AND COMPUTER VISION/I.4.8: Scene Analysis
[SDE]Environmental Sciences
[SDE.BE]Environmental Sciences/Biodiversity and Ecology
[SDE.ES]Environmental Sciences/Environmental and Society
[SDE.MCG]Environmental Sciences/Global Changes
[SDE.IE]Environmental Sciences/Environmental Engineering
[SDU.STU]Sciences of the Universe [physics]/Earth Sciences
[SDV.BIBS]Life Sciences [q-bio]/Quantitative Methods [q-bio.QM]
[SDV.BDD]Life Sciences [q-bio]/Development Biology
[SDV.BID]Life Sciences [q-bio]/Biodiversity
[SDV.EE]Life Sciences [q-bio]/Ecology
environment
[SDV.EE.ECO]Life Sciences [q-bio]/Ecology
environment/Ecosystems
[INFO.INFO-DS]Computer Science [cs]/Data Structures and Algorithms [cs.DS]
[INFO.INFO-CY]Computer Science [cs]/Computers and Society [cs.CY]
[INFO.INFO-CV]Computer Science [cs]/Computer Vision and Pattern Recognition [cs.CV]
[INFO.INFO-GR]Computer Science [cs]/Graphics [cs.GR]
[INFO.INFO-LG]Computer Science [cs]/Machine Learning [cs.LG]
[INFO.INFO-IR]Computer Science [cs]/Information Retrieval [cs.IR]
[INFO.INFO-TI]Computer Science [cs]/Image Processing [eess.IV]
spellingShingle Landsat TM
QGIS
NDVI
Vegetation Index
Cartography
ACM: I.: Computing Methodologies
ACM: I.: Computing Methodologies/I.4: IMAGE PROCESSING AND COMPUTER VISION
ACM: I.: Computing Methodologies/I.4: IMAGE PROCESSING AND COMPUTER VISION/I.4.10: Image Representation
ACM: I.: Computing Methodologies/I.4: IMAGE PROCESSING AND COMPUTER VISION/I.4.6: Segmentation
ACM: I.: Computing Methodologies/I.5: PATTERN RECOGNITION
ACM: I.: Computing Methodologies/I.6: SIMULATION AND MODELING
ACM: K.: Computing Milieux/K.3: COMPUTERS AND EDUCATION
ACM: K.: Computing Milieux/K.8: PERSONAL COMPUTING
ACM: I.: Computing Methodologies/I.4: IMAGE PROCESSING AND COMPUTER VISION/I.4.0: General
ACM: I.: Computing Methodologies/I.4: IMAGE PROCESSING AND COMPUTER VISION/I.4.1: Digitization and Image Capture
ACM: I.: Computing Methodologies/I.4: IMAGE PROCESSING AND COMPUTER VISION/I.4.3: Enhancement
ACM: I.: Computing Methodologies/I.4: IMAGE PROCESSING AND COMPUTER VISION/I.4.2: Compression (Coding)
ACM: I.: Computing Methodologies/I.4: IMAGE PROCESSING AND COMPUTER VISION/I.4.8: Scene Analysis
[SDE]Environmental Sciences
[SDE.BE]Environmental Sciences/Biodiversity and Ecology
[SDE.ES]Environmental Sciences/Environmental and Society
[SDE.MCG]Environmental Sciences/Global Changes
[SDE.IE]Environmental Sciences/Environmental Engineering
[SDU.STU]Sciences of the Universe [physics]/Earth Sciences
[SDV.BIBS]Life Sciences [q-bio]/Quantitative Methods [q-bio.QM]
[SDV.BDD]Life Sciences [q-bio]/Development Biology
[SDV.BID]Life Sciences [q-bio]/Biodiversity
[SDV.EE]Life Sciences [q-bio]/Ecology
environment
[SDV.EE.ECO]Life Sciences [q-bio]/Ecology
environment/Ecosystems
[INFO.INFO-DS]Computer Science [cs]/Data Structures and Algorithms [cs.DS]
[INFO.INFO-CY]Computer Science [cs]/Computers and Society [cs.CY]
[INFO.INFO-CV]Computer Science [cs]/Computer Vision and Pattern Recognition [cs.CV]
[INFO.INFO-GR]Computer Science [cs]/Graphics [cs.GR]
[INFO.INFO-LG]Computer Science [cs]/Machine Learning [cs.LG]
[INFO.INFO-IR]Computer Science [cs]/Information Retrieval [cs.IR]
[INFO.INFO-TI]Computer Science [cs]/Image Processing [eess.IV]
Lemenkova, Polina
Hyperspectral Vegetation Indices Calculated by Qgis Using Landsat Tm Image: a Case Study of Northern Iceland
topic_facet Landsat TM
QGIS
NDVI
Vegetation Index
Cartography
ACM: I.: Computing Methodologies
ACM: I.: Computing Methodologies/I.4: IMAGE PROCESSING AND COMPUTER VISION
ACM: I.: Computing Methodologies/I.4: IMAGE PROCESSING AND COMPUTER VISION/I.4.10: Image Representation
ACM: I.: Computing Methodologies/I.4: IMAGE PROCESSING AND COMPUTER VISION/I.4.6: Segmentation
ACM: I.: Computing Methodologies/I.5: PATTERN RECOGNITION
ACM: I.: Computing Methodologies/I.6: SIMULATION AND MODELING
ACM: K.: Computing Milieux/K.3: COMPUTERS AND EDUCATION
ACM: K.: Computing Milieux/K.8: PERSONAL COMPUTING
ACM: I.: Computing Methodologies/I.4: IMAGE PROCESSING AND COMPUTER VISION/I.4.0: General
ACM: I.: Computing Methodologies/I.4: IMAGE PROCESSING AND COMPUTER VISION/I.4.1: Digitization and Image Capture
ACM: I.: Computing Methodologies/I.4: IMAGE PROCESSING AND COMPUTER VISION/I.4.3: Enhancement
ACM: I.: Computing Methodologies/I.4: IMAGE PROCESSING AND COMPUTER VISION/I.4.2: Compression (Coding)
ACM: I.: Computing Methodologies/I.4: IMAGE PROCESSING AND COMPUTER VISION/I.4.8: Scene Analysis
[SDE]Environmental Sciences
[SDE.BE]Environmental Sciences/Biodiversity and Ecology
[SDE.ES]Environmental Sciences/Environmental and Society
[SDE.MCG]Environmental Sciences/Global Changes
[SDE.IE]Environmental Sciences/Environmental Engineering
[SDU.STU]Sciences of the Universe [physics]/Earth Sciences
[SDV.BIBS]Life Sciences [q-bio]/Quantitative Methods [q-bio.QM]
[SDV.BDD]Life Sciences [q-bio]/Development Biology
[SDV.BID]Life Sciences [q-bio]/Biodiversity
[SDV.EE]Life Sciences [q-bio]/Ecology
environment
[SDV.EE.ECO]Life Sciences [q-bio]/Ecology
environment/Ecosystems
[INFO.INFO-DS]Computer Science [cs]/Data Structures and Algorithms [cs.DS]
[INFO.INFO-CY]Computer Science [cs]/Computers and Society [cs.CY]
[INFO.INFO-CV]Computer Science [cs]/Computer Vision and Pattern Recognition [cs.CV]
[INFO.INFO-GR]Computer Science [cs]/Graphics [cs.GR]
[INFO.INFO-LG]Computer Science [cs]/Machine Learning [cs.LG]
[INFO.INFO-IR]Computer Science [cs]/Information Retrieval [cs.IR]
[INFO.INFO-TI]Computer Science [cs]/Image Processing [eess.IV]
description International audience The vegetation indices (VIs) derived from the hyperspectral reflectance of vegetation are presented in this study for monitoring live green vegetation in the northern ecosystems of Iceland, along the fjords of Eyjafjörður and the Skagafjörður. The comparative analysis of the following VIs was performed: the NDVI, RVI, NRVI, TVI, CTVI, TTVI and SAVI. The methodology is based on the raster calculator band in a QGIS. The dataset includes a Landsat TM scene of 2013, UTM Zone 53, WGS84 captured from the GloVis. The computed bands include the NIR and R spectral bands and their combinations according to the algorithms of each of the seven VIs. The hyperspectral reflectance and crop canopy computations were applied to generate various scales of VIs and demonstrated following data range: NDVI: -0.91 to 0.65, RVI: 0.22 to 19.65, NRVI: 0.63 to 0.90, TVI: 0 to 1.12, CTVI: -0.64 to 1.07, TTVI: 0.70 to 1.18 and SAVI: -1.36 to 0.99 (roughly to 1.00). Of these, the RVI, NRVI, TVI and TTVI are adjusted to the positive values while the NDVI, CTVI and SAVI do include the negative diapason in the dataset due to the computing algorithm. The algorithms of the seven VIs are described and visualized in form of maps based on the multispectral remote sensing Landsat TM imagery identifying vegetated areas, their health condition and distribution of green areas against the bare soils, rocks, ocean water, lakes and ice-covered glaciers. The paper contributes both to the technical presentation of the QGIS functionality for the Landsat TM data processing by a raster calculator, and to the regional geographic studies of Iceland and Arctic ecosystems.
author2 Schmidt United Institute of Physics of the Earth Moscow (IPE)
Russian Academy of Sciences Moscow (RAS)
format Article in Journal/Newspaper
author Lemenkova, Polina
author_facet Lemenkova, Polina
author_sort Lemenkova, Polina
title Hyperspectral Vegetation Indices Calculated by Qgis Using Landsat Tm Image: a Case Study of Northern Iceland
title_short Hyperspectral Vegetation Indices Calculated by Qgis Using Landsat Tm Image: a Case Study of Northern Iceland
title_full Hyperspectral Vegetation Indices Calculated by Qgis Using Landsat Tm Image: a Case Study of Northern Iceland
title_fullStr Hyperspectral Vegetation Indices Calculated by Qgis Using Landsat Tm Image: a Case Study of Northern Iceland
title_full_unstemmed Hyperspectral Vegetation Indices Calculated by Qgis Using Landsat Tm Image: a Case Study of Northern Iceland
title_sort hyperspectral vegetation indices calculated by qgis using landsat tm image: a case study of northern iceland
publisher HAL CCSD
publishDate 2020
url https://hal.archives-ouvertes.fr/hal-03030414
https://hal.archives-ouvertes.fr/hal-03030414/document
https://hal.archives-ouvertes.fr/hal-03030414/file/25438050%20-%20Advanced%20Research%20in%20Life%20Sciences%20Hyperspectral%20Vegetation%20Indices.pdf
https://doi.org/10.2478/arls-2020-0021
long_lat ENVELOPE(-18.150,-18.150,65.500,65.500)
ENVELOPE(-19.561,-19.561,65.875,65.875)
geographic Arctic
Eyjafjörður
Skagafjörður
geographic_facet Arctic
Eyjafjörður
Skagafjörður
genre Arctic
Iceland
genre_facet Arctic
Iceland
op_source EISSN: 2543-8050
Advanced Research in Life Sciences
https://hal.archives-ouvertes.fr/hal-03030414
Advanced Research in Life Sciences, Sciendo, 2020, 4 (1), pp.70-78. ⟨10.2478/arls-2020-0021⟩
op_relation info:eu-repo/semantics/altIdentifier/doi/10.2478/arls-2020-0021
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https://hal.archives-ouvertes.fr/hal-03030414
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https://hal.archives-ouvertes.fr/hal-03030414/file/25438050%20-%20Advanced%20Research%20in%20Life%20Sciences%20Hyperspectral%20Vegetation%20Indices.pdf
doi:10.2478/arls-2020-0021
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spelling ftccsdartic:oai:HAL:hal-03030414v1 2023-05-15T15:19:55+02:00 Hyperspectral Vegetation Indices Calculated by Qgis Using Landsat Tm Image: a Case Study of Northern Iceland Lemenkova, Polina Schmidt United Institute of Physics of the Earth Moscow (IPE) Russian Academy of Sciences Moscow (RAS) 2020-11-28 https://hal.archives-ouvertes.fr/hal-03030414 https://hal.archives-ouvertes.fr/hal-03030414/document https://hal.archives-ouvertes.fr/hal-03030414/file/25438050%20-%20Advanced%20Research%20in%20Life%20Sciences%20Hyperspectral%20Vegetation%20Indices.pdf https://doi.org/10.2478/arls-2020-0021 en eng HAL CCSD Sciendo info:eu-repo/semantics/altIdentifier/doi/10.2478/arls-2020-0021 hal-03030414 https://hal.archives-ouvertes.fr/hal-03030414 https://hal.archives-ouvertes.fr/hal-03030414/document https://hal.archives-ouvertes.fr/hal-03030414/file/25438050%20-%20Advanced%20Research%20in%20Life%20Sciences%20Hyperspectral%20Vegetation%20Indices.pdf doi:10.2478/arls-2020-0021 http://creativecommons.org/licenses/by/ info:eu-repo/semantics/OpenAccess EISSN: 2543-8050 Advanced Research in Life Sciences https://hal.archives-ouvertes.fr/hal-03030414 Advanced Research in Life Sciences, Sciendo, 2020, 4 (1), pp.70-78. ⟨10.2478/arls-2020-0021⟩ Landsat TM QGIS NDVI Vegetation Index Cartography ACM: I.: Computing Methodologies ACM: I.: Computing Methodologies/I.4: IMAGE PROCESSING AND COMPUTER VISION ACM: I.: Computing Methodologies/I.4: IMAGE PROCESSING AND COMPUTER VISION/I.4.10: Image Representation ACM: I.: Computing Methodologies/I.4: IMAGE PROCESSING AND COMPUTER VISION/I.4.6: Segmentation ACM: I.: Computing Methodologies/I.5: PATTERN RECOGNITION ACM: I.: Computing Methodologies/I.6: SIMULATION AND MODELING ACM: K.: Computing Milieux/K.3: COMPUTERS AND EDUCATION ACM: K.: Computing Milieux/K.8: PERSONAL COMPUTING ACM: I.: Computing Methodologies/I.4: IMAGE PROCESSING AND COMPUTER VISION/I.4.0: General ACM: I.: Computing Methodologies/I.4: IMAGE PROCESSING AND COMPUTER VISION/I.4.1: Digitization and Image Capture ACM: I.: Computing Methodologies/I.4: IMAGE PROCESSING AND COMPUTER VISION/I.4.3: Enhancement ACM: I.: Computing Methodologies/I.4: IMAGE PROCESSING AND COMPUTER VISION/I.4.2: Compression (Coding) ACM: I.: Computing Methodologies/I.4: IMAGE PROCESSING AND COMPUTER VISION/I.4.8: Scene Analysis [SDE]Environmental Sciences [SDE.BE]Environmental Sciences/Biodiversity and Ecology [SDE.ES]Environmental Sciences/Environmental and Society [SDE.MCG]Environmental Sciences/Global Changes [SDE.IE]Environmental Sciences/Environmental Engineering [SDU.STU]Sciences of the Universe [physics]/Earth Sciences [SDV.BIBS]Life Sciences [q-bio]/Quantitative Methods [q-bio.QM] [SDV.BDD]Life Sciences [q-bio]/Development Biology [SDV.BID]Life Sciences [q-bio]/Biodiversity [SDV.EE]Life Sciences [q-bio]/Ecology environment [SDV.EE.ECO]Life Sciences [q-bio]/Ecology environment/Ecosystems [INFO.INFO-DS]Computer Science [cs]/Data Structures and Algorithms [cs.DS] [INFO.INFO-CY]Computer Science [cs]/Computers and Society [cs.CY] [INFO.INFO-CV]Computer Science [cs]/Computer Vision and Pattern Recognition [cs.CV] [INFO.INFO-GR]Computer Science [cs]/Graphics [cs.GR] [INFO.INFO-LG]Computer Science [cs]/Machine Learning [cs.LG] [INFO.INFO-IR]Computer Science [cs]/Information Retrieval [cs.IR] [INFO.INFO-TI]Computer Science [cs]/Image Processing [eess.IV] info:eu-repo/semantics/article Journal articles 2020 ftccsdartic https://doi.org/10.2478/arls-2020-0021 2020-12-23T22:24:56Z International audience The vegetation indices (VIs) derived from the hyperspectral reflectance of vegetation are presented in this study for monitoring live green vegetation in the northern ecosystems of Iceland, along the fjords of Eyjafjörður and the Skagafjörður. The comparative analysis of the following VIs was performed: the NDVI, RVI, NRVI, TVI, CTVI, TTVI and SAVI. The methodology is based on the raster calculator band in a QGIS. The dataset includes a Landsat TM scene of 2013, UTM Zone 53, WGS84 captured from the GloVis. The computed bands include the NIR and R spectral bands and their combinations according to the algorithms of each of the seven VIs. The hyperspectral reflectance and crop canopy computations were applied to generate various scales of VIs and demonstrated following data range: NDVI: -0.91 to 0.65, RVI: 0.22 to 19.65, NRVI: 0.63 to 0.90, TVI: 0 to 1.12, CTVI: -0.64 to 1.07, TTVI: 0.70 to 1.18 and SAVI: -1.36 to 0.99 (roughly to 1.00). Of these, the RVI, NRVI, TVI and TTVI are adjusted to the positive values while the NDVI, CTVI and SAVI do include the negative diapason in the dataset due to the computing algorithm. The algorithms of the seven VIs are described and visualized in form of maps based on the multispectral remote sensing Landsat TM imagery identifying vegetated areas, their health condition and distribution of green areas against the bare soils, rocks, ocean water, lakes and ice-covered glaciers. The paper contributes both to the technical presentation of the QGIS functionality for the Landsat TM data processing by a raster calculator, and to the regional geographic studies of Iceland and Arctic ecosystems. Article in Journal/Newspaper Arctic Iceland Archive ouverte HAL (Hyper Article en Ligne, CCSD - Centre pour la Communication Scientifique Directe) Arctic Eyjafjörður ENVELOPE(-18.150,-18.150,65.500,65.500) Skagafjörður ENVELOPE(-19.561,-19.561,65.875,65.875) Advanced Research in Life Sciences 4 1 70 78