Hierarchical variance decomposition of fish scale growth and age to investigate the relative contributions of readers and scales
Correct estimation of interindividual variability is of primary importance in models aiming to quantify population dynamics. In a fisheries context, individual information such as age and growth is often extracted using scales; however, the rationale for using a given scalimetric method (i.e. number...
Published in: | Marine and Freshwater Research |
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Format: | Article in Journal/Newspaper |
Language: | English |
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HAL CCSD
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Online Access: | https://hal.archives-ouvertes.fr/hal-02414999 https://hal.archives-ouvertes.fr/hal-02414999/document https://hal.archives-ouvertes.fr/hal-02414999/file/2019_Aulus_MarineFreshwaterResearch.pdf https://doi.org/10.1071/MF19059 |
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ftccsdartic:oai:HAL:hal-02414999v1 2023-05-15T17:02:06+02:00 Hierarchical variance decomposition of fish scale growth and age to investigate the relative contributions of readers and scales Aulus Giacosa, Lucie Aymes, Jean-Christophe Gaudin, Philippe VIGNON, Matthias Ecologie Comportementale et Biologie des Populations de Poissons (ECOBIOP) Institut National de la Recherche Agronomique (INRA)-Université de Pau et des Pays de l'Adour (UPPA) 2019 https://hal.archives-ouvertes.fr/hal-02414999 https://hal.archives-ouvertes.fr/hal-02414999/document https://hal.archives-ouvertes.fr/hal-02414999/file/2019_Aulus_MarineFreshwaterResearch.pdf https://doi.org/10.1071/MF19059 en eng HAL CCSD CSIRO Publishing info:eu-repo/semantics/altIdentifier/doi/10.1071/MF19059 hal-02414999 https://hal.archives-ouvertes.fr/hal-02414999 https://hal.archives-ouvertes.fr/hal-02414999/document https://hal.archives-ouvertes.fr/hal-02414999/file/2019_Aulus_MarineFreshwaterResearch.pdf doi:10.1071/MF19059 PRODINRA: 490035 WOS: 000498228100018 http://creativecommons.org/licenses/by-nc-nd/ info:eu-repo/semantics/OpenAccess CC-BY-NC-ND ISSN: 1323-1650 Marine and Freshwater Research https://hal.archives-ouvertes.fr/hal-02414999 Marine and Freshwater Research, CSIRO Publishing, 2019, 70 (12), pp.1828-1837. ⟨10.1071/MF19059⟩ scalimetry sea trout introduced species introduced specie measurement error sampling strategy population dynamics salmo trutta espèce introduite dynamique des populations scalimétrie erreur de mesure stratégie d'echantillonnage [SDE.BE]Environmental Sciences/Biodiversity and Ecology info:eu-repo/semantics/article Journal articles 2019 ftccsdartic https://doi.org/10.1071/MF19059 2021-02-20T23:50:43Z Correct estimation of interindividual variability is of primary importance in models aiming to quantify population dynamics. In a fisheries context, individual information such as age and growth is often extracted using scales; however, the rationale for using a given scalimetric method (i.e. number of scales per individual and number of readers) is rarely discussed, but different sources of variance may affect the results. As a case study, we used scale growth and age of brown trout (Salmo trutta) caught in the Kerguelen Islands. Based on a nested design (readings of four scales per fish by two independent readers), we decomposed variance in growth and age according to fish (interindividual level), scales (intraindividual level) and readers by using repeatability analysis. The results highlight that most variation is attributable to fish. Readers and scales contribute little to interindividual variance, suggesting that inference was insensitive to intraorganism biological variation. Using additional scales or readers was an inefficient use of sampling resources. We argue that variance decomposition should be widely used for studies aimed at modelling natural variability in life history traits. This would improve our knowledge of the implications of measurement error, helping rationalise and define appropriate sampling strategies Article in Journal/Newspaper Kerguelen Islands Archive ouverte HAL (Hyper Article en Ligne, CCSD - Centre pour la Communication Scientifique Directe) Kerguelen Kerguelen Islands Marine and Freshwater Research 70 12 1828 |
institution |
Open Polar |
collection |
Archive ouverte HAL (Hyper Article en Ligne, CCSD - Centre pour la Communication Scientifique Directe) |
op_collection_id |
ftccsdartic |
language |
English |
topic |
scalimetry sea trout introduced species introduced specie measurement error sampling strategy population dynamics salmo trutta espèce introduite dynamique des populations scalimétrie erreur de mesure stratégie d'echantillonnage [SDE.BE]Environmental Sciences/Biodiversity and Ecology |
spellingShingle |
scalimetry sea trout introduced species introduced specie measurement error sampling strategy population dynamics salmo trutta espèce introduite dynamique des populations scalimétrie erreur de mesure stratégie d'echantillonnage [SDE.BE]Environmental Sciences/Biodiversity and Ecology Aulus Giacosa, Lucie Aymes, Jean-Christophe Gaudin, Philippe VIGNON, Matthias Hierarchical variance decomposition of fish scale growth and age to investigate the relative contributions of readers and scales |
topic_facet |
scalimetry sea trout introduced species introduced specie measurement error sampling strategy population dynamics salmo trutta espèce introduite dynamique des populations scalimétrie erreur de mesure stratégie d'echantillonnage [SDE.BE]Environmental Sciences/Biodiversity and Ecology |
description |
Correct estimation of interindividual variability is of primary importance in models aiming to quantify population dynamics. In a fisheries context, individual information such as age and growth is often extracted using scales; however, the rationale for using a given scalimetric method (i.e. number of scales per individual and number of readers) is rarely discussed, but different sources of variance may affect the results. As a case study, we used scale growth and age of brown trout (Salmo trutta) caught in the Kerguelen Islands. Based on a nested design (readings of four scales per fish by two independent readers), we decomposed variance in growth and age according to fish (interindividual level), scales (intraindividual level) and readers by using repeatability analysis. The results highlight that most variation is attributable to fish. Readers and scales contribute little to interindividual variance, suggesting that inference was insensitive to intraorganism biological variation. Using additional scales or readers was an inefficient use of sampling resources. We argue that variance decomposition should be widely used for studies aimed at modelling natural variability in life history traits. This would improve our knowledge of the implications of measurement error, helping rationalise and define appropriate sampling strategies |
author2 |
Ecologie Comportementale et Biologie des Populations de Poissons (ECOBIOP) Institut National de la Recherche Agronomique (INRA)-Université de Pau et des Pays de l'Adour (UPPA) |
format |
Article in Journal/Newspaper |
author |
Aulus Giacosa, Lucie Aymes, Jean-Christophe Gaudin, Philippe VIGNON, Matthias |
author_facet |
Aulus Giacosa, Lucie Aymes, Jean-Christophe Gaudin, Philippe VIGNON, Matthias |
author_sort |
Aulus Giacosa, Lucie |
title |
Hierarchical variance decomposition of fish scale growth and age to investigate the relative contributions of readers and scales |
title_short |
Hierarchical variance decomposition of fish scale growth and age to investigate the relative contributions of readers and scales |
title_full |
Hierarchical variance decomposition of fish scale growth and age to investigate the relative contributions of readers and scales |
title_fullStr |
Hierarchical variance decomposition of fish scale growth and age to investigate the relative contributions of readers and scales |
title_full_unstemmed |
Hierarchical variance decomposition of fish scale growth and age to investigate the relative contributions of readers and scales |
title_sort |
hierarchical variance decomposition of fish scale growth and age to investigate the relative contributions of readers and scales |
publisher |
HAL CCSD |
publishDate |
2019 |
url |
https://hal.archives-ouvertes.fr/hal-02414999 https://hal.archives-ouvertes.fr/hal-02414999/document https://hal.archives-ouvertes.fr/hal-02414999/file/2019_Aulus_MarineFreshwaterResearch.pdf https://doi.org/10.1071/MF19059 |
geographic |
Kerguelen Kerguelen Islands |
geographic_facet |
Kerguelen Kerguelen Islands |
genre |
Kerguelen Islands |
genre_facet |
Kerguelen Islands |
op_source |
ISSN: 1323-1650 Marine and Freshwater Research https://hal.archives-ouvertes.fr/hal-02414999 Marine and Freshwater Research, CSIRO Publishing, 2019, 70 (12), pp.1828-1837. ⟨10.1071/MF19059⟩ |
op_relation |
info:eu-repo/semantics/altIdentifier/doi/10.1071/MF19059 hal-02414999 https://hal.archives-ouvertes.fr/hal-02414999 https://hal.archives-ouvertes.fr/hal-02414999/document https://hal.archives-ouvertes.fr/hal-02414999/file/2019_Aulus_MarineFreshwaterResearch.pdf doi:10.1071/MF19059 PRODINRA: 490035 WOS: 000498228100018 |
op_rights |
http://creativecommons.org/licenses/by-nc-nd/ info:eu-repo/semantics/OpenAccess |
op_rightsnorm |
CC-BY-NC-ND |
op_doi |
https://doi.org/10.1071/MF19059 |
container_title |
Marine and Freshwater Research |
container_volume |
70 |
container_issue |
12 |
container_start_page |
1828 |
_version_ |
1766055347313704960 |