High-coverage genomes to elucidate the evolution of penguins
International audience Penguins (Sphenisciformes) are a remarkable order of flightless wing-propelled diving seabirds distributed widely across the southern hemisphere. They share a volant common ancestor with Procellariiformes close to the Cretaceous-Paleogene boundary (66 million years ago) and su...
Published in: | GigaScience |
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Main Authors: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
Other Authors: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
Format: | Article in Journal/Newspaper |
Language: | English |
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HAL CCSD
2019
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Online Access: | https://hal.archives-ouvertes.fr/hal-02296805 https://doi.org/10.1093/gigascience/giz117 |
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Archive ouverte HAL (Hyper Article en Ligne, CCSD - Centre pour la Communication Scientifique Directe) |
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English |
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[SDE]Environmental Sciences |
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[SDE]Environmental Sciences Pan, Hailin Cole, Theresa Bi, Xupeng Fang, Miaoquan Zhou, Chengran Yang, Zhengtao Ksepka, Daniel Hart, Tom Bouzat, Juan Argilla, Lisa Bertelsen, Mads F. Boersma, P Dee Bost, Charles-André Cherel, Yves Dann, Peter Fiddaman, Steven Howard, Pauline Labuschagne, Kim Mattern, Thomas Miller, Gary, Parker, Patricia Phillips, Richard, Quillfeldt, Petra Ryan, Peter, Taylor, Helen Thompson, David Young, Melanie Ellegaard, Martin Gilbert, M Thomas P Sinding, Mikkel-Holger Pacheco, George Shepherd, Lara Tennyson, Alan Grosser, Stefanie Kay, Emily Nupen, Lisa Ellenberg, Ursula Houston, David Reeve, Andrew Hart Johnson, Kathryn Masello, Juan Stracke, Thomas McKinlay, Bruce Borboroglu, Pablo García Zhang, De-Xing Zhang, Guojie High-coverage genomes to elucidate the evolution of penguins |
topic_facet |
[SDE]Environmental Sciences |
description |
International audience Penguins (Sphenisciformes) are a remarkable order of flightless wing-propelled diving seabirds distributed widely across the southern hemisphere. They share a volant common ancestor with Procellariiformes close to the Cretaceous-Paleogene boundary (66 million years ago) and subsequently lost the ability to fly but enhanced their diving capabilities. With ∼20 species among 6 genera, penguins range from the tropical Galápagos Islands to the oceanic temperate forests of New Zealand, the rocky coastlines of the sub-Antarctic islands, and the sea ice around Antarctica. To inhabit such diverse and extreme environments, penguins evolved many physiological and morphological adaptations. However, they are also highly sensitive to climate change. Therefore, penguins provide an exciting target system for understanding the evolutionary processes of speciation, adaptation, and demography. Genomic data are an emerging resource for addressing questions about such processes. |
author2 |
Beijing Genomics Institute Shenzhen (BGI) Manaaki Whenua – Landcare Research Lincoln Bruce Museum USA Department of Zoology Oxford University of Oxford Oxford Department of Biological Sciences OH, USA Bowling Green State University (BGSU) The Wildlife Hospital Dunedin New Zealand Otago Polytechnic New Zealand Copenhagen Zoo Center for Ecosystem Sentinels Seattle, USA University of Washington Seattle Centre d'Études Biologiques de Chizé - UMR 7372 (CEBC) Université de La Rochelle (ULR)-Centre National de la Recherche Scientifique (CNRS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE) Research Department, Phillip Island Nature Parks Australia Phillip Island Nature Parks Australia Department of Zoology, Peter Medawar Building for Pathogen Research UK Hornby Veterinary Centre New Zealand National Zoological Gardens of South Africa Department of Zoology University of Otago Dunedin, Nouvelle-Zélande Division of Pathology and Laboratory Medicine Australia The University of Western Australia (UWA) Department of Biology, University of Missouri USA University of Missouri USA British Antarctic Survey (BAS) Natural Environment Research Council (NERC) Justus-Liebig-Universität Giessen Germany Universität Giessen Germany FitzPatrick Institute of African Ornithology University of Cape Town-DST-NRF Centre of Excellence Vet Services Hawkes Bay Ltd New Zealand National Institute of Water and Atmospheric Research Auckland (NIWA) Department of Zoology, University of Otago New Zealand Section for GeoGenetics Globe Institute Faculty of Health and Medical Sciences University of Copenhagen = Københavns Universitet (KU)-University of Copenhagen = Københavns Universitet (KU)-Faculty of Health and Medical Sciences University of Copenhagen = Københavns Universitet (KU)-University of Copenhagen = Københavns Universitet (KU) Department of Biology Copenhagen Faculty of Science Copenhagen Museum of New Zealand - Te Papa Tongarewa Wildbase, Massey University New Zealand Massey University New Zealand Global Penguin Society and Department of Ecology Australia La Trobe University Melbourne Biodiversity Group, Department of Conservation New Zealand Section for Ecology and Evolution Copenhagen University of Copenhagen = Københavns Universitet (KU)-University of Copenhagen = Københavns Universitet (KU)-Faculty of Science Copenhagen South Island Wildlife Hospital New Zealand |
format |
Article in Journal/Newspaper |
author |
Pan, Hailin Cole, Theresa Bi, Xupeng Fang, Miaoquan Zhou, Chengran Yang, Zhengtao Ksepka, Daniel Hart, Tom Bouzat, Juan Argilla, Lisa Bertelsen, Mads F. Boersma, P Dee Bost, Charles-André Cherel, Yves Dann, Peter Fiddaman, Steven Howard, Pauline Labuschagne, Kim Mattern, Thomas Miller, Gary, Parker, Patricia Phillips, Richard, Quillfeldt, Petra Ryan, Peter, Taylor, Helen Thompson, David Young, Melanie Ellegaard, Martin Gilbert, M Thomas P Sinding, Mikkel-Holger Pacheco, George Shepherd, Lara Tennyson, Alan Grosser, Stefanie Kay, Emily Nupen, Lisa Ellenberg, Ursula Houston, David Reeve, Andrew Hart Johnson, Kathryn Masello, Juan Stracke, Thomas McKinlay, Bruce Borboroglu, Pablo García Zhang, De-Xing Zhang, Guojie |
author_facet |
Pan, Hailin Cole, Theresa Bi, Xupeng Fang, Miaoquan Zhou, Chengran Yang, Zhengtao Ksepka, Daniel Hart, Tom Bouzat, Juan Argilla, Lisa Bertelsen, Mads F. Boersma, P Dee Bost, Charles-André Cherel, Yves Dann, Peter Fiddaman, Steven Howard, Pauline Labuschagne, Kim Mattern, Thomas Miller, Gary, Parker, Patricia Phillips, Richard, Quillfeldt, Petra Ryan, Peter, Taylor, Helen Thompson, David Young, Melanie Ellegaard, Martin Gilbert, M Thomas P Sinding, Mikkel-Holger Pacheco, George Shepherd, Lara Tennyson, Alan Grosser, Stefanie Kay, Emily Nupen, Lisa Ellenberg, Ursula Houston, David Reeve, Andrew Hart Johnson, Kathryn Masello, Juan Stracke, Thomas McKinlay, Bruce Borboroglu, Pablo García Zhang, De-Xing Zhang, Guojie |
author_sort |
Pan, Hailin |
title |
High-coverage genomes to elucidate the evolution of penguins |
title_short |
High-coverage genomes to elucidate the evolution of penguins |
title_full |
High-coverage genomes to elucidate the evolution of penguins |
title_fullStr |
High-coverage genomes to elucidate the evolution of penguins |
title_full_unstemmed |
High-coverage genomes to elucidate the evolution of penguins |
title_sort |
high-coverage genomes to elucidate the evolution of penguins |
publisher |
HAL CCSD |
publishDate |
2019 |
url |
https://hal.archives-ouvertes.fr/hal-02296805 https://doi.org/10.1093/gigascience/giz117 |
geographic |
Antarctic New Zealand |
geographic_facet |
Antarctic New Zealand |
genre |
Antarc* Antarctic Antarctica Sea ice |
genre_facet |
Antarc* Antarctic Antarctica Sea ice |
op_source |
ISSN: 2047-217X GigaScience https://hal.archives-ouvertes.fr/hal-02296805 GigaScience, BioMed Central, 2019, 8 (9), pp.1-17. ⟨10.1093/gigascience/giz117⟩ |
op_relation |
info:eu-repo/semantics/altIdentifier/doi/10.1093/gigascience/giz117 hal-02296805 https://hal.archives-ouvertes.fr/hal-02296805 doi:10.1093/gigascience/giz117 |
op_doi |
https://doi.org/10.1093/gigascience/giz117 |
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GigaScience |
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8 |
container_issue |
9 |
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ftccsdartic:oai:HAL:hal-02296805v1 2023-05-15T13:58:43+02:00 High-coverage genomes to elucidate the evolution of penguins Pan, Hailin Cole, Theresa Bi, Xupeng Fang, Miaoquan Zhou, Chengran Yang, Zhengtao Ksepka, Daniel Hart, Tom Bouzat, Juan Argilla, Lisa Bertelsen, Mads F. Boersma, P Dee Bost, Charles-André Cherel, Yves Dann, Peter Fiddaman, Steven Howard, Pauline Labuschagne, Kim Mattern, Thomas Miller, Gary, Parker, Patricia Phillips, Richard, Quillfeldt, Petra Ryan, Peter, Taylor, Helen Thompson, David Young, Melanie Ellegaard, Martin Gilbert, M Thomas P Sinding, Mikkel-Holger Pacheco, George Shepherd, Lara Tennyson, Alan Grosser, Stefanie Kay, Emily Nupen, Lisa Ellenberg, Ursula Houston, David Reeve, Andrew Hart Johnson, Kathryn Masello, Juan Stracke, Thomas McKinlay, Bruce Borboroglu, Pablo García Zhang, De-Xing Zhang, Guojie Beijing Genomics Institute Shenzhen (BGI) Manaaki Whenua – Landcare Research Lincoln Bruce Museum USA Department of Zoology Oxford University of Oxford Oxford Department of Biological Sciences OH, USA Bowling Green State University (BGSU) The Wildlife Hospital Dunedin New Zealand Otago Polytechnic New Zealand Copenhagen Zoo Center for Ecosystem Sentinels Seattle, USA University of Washington Seattle Centre d'Études Biologiques de Chizé - UMR 7372 (CEBC) Université de La Rochelle (ULR)-Centre National de la Recherche Scientifique (CNRS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE) Research Department, Phillip Island Nature Parks Australia Phillip Island Nature Parks Australia Department of Zoology, Peter Medawar Building for Pathogen Research UK Hornby Veterinary Centre New Zealand National Zoological Gardens of South Africa Department of Zoology University of Otago Dunedin, Nouvelle-Zélande Division of Pathology and Laboratory Medicine Australia The University of Western Australia (UWA) Department of Biology, University of Missouri USA University of Missouri USA British Antarctic Survey (BAS) Natural Environment Research Council (NERC) Justus-Liebig-Universität Giessen Germany Universität Giessen Germany FitzPatrick Institute of African Ornithology University of Cape Town-DST-NRF Centre of Excellence Vet Services Hawkes Bay Ltd New Zealand National Institute of Water and Atmospheric Research Auckland (NIWA) Department of Zoology, University of Otago New Zealand Section for GeoGenetics Globe Institute Faculty of Health and Medical Sciences University of Copenhagen = Københavns Universitet (KU)-University of Copenhagen = Københavns Universitet (KU)-Faculty of Health and Medical Sciences University of Copenhagen = Københavns Universitet (KU)-University of Copenhagen = Københavns Universitet (KU) Department of Biology Copenhagen Faculty of Science Copenhagen Museum of New Zealand - Te Papa Tongarewa Wildbase, Massey University New Zealand Massey University New Zealand Global Penguin Society and Department of Ecology Australia La Trobe University Melbourne Biodiversity Group, Department of Conservation New Zealand Section for Ecology and Evolution Copenhagen University of Copenhagen = Københavns Universitet (KU)-University of Copenhagen = Københavns Universitet (KU)-Faculty of Science Copenhagen South Island Wildlife Hospital New Zealand 2019-09-01 https://hal.archives-ouvertes.fr/hal-02296805 https://doi.org/10.1093/gigascience/giz117 en eng HAL CCSD BioMed Central info:eu-repo/semantics/altIdentifier/doi/10.1093/gigascience/giz117 hal-02296805 https://hal.archives-ouvertes.fr/hal-02296805 doi:10.1093/gigascience/giz117 ISSN: 2047-217X GigaScience https://hal.archives-ouvertes.fr/hal-02296805 GigaScience, BioMed Central, 2019, 8 (9), pp.1-17. ⟨10.1093/gigascience/giz117⟩ [SDE]Environmental Sciences info:eu-repo/semantics/article Journal articles 2019 ftccsdartic https://doi.org/10.1093/gigascience/giz117 2021-11-07T01:39:18Z International audience Penguins (Sphenisciformes) are a remarkable order of flightless wing-propelled diving seabirds distributed widely across the southern hemisphere. They share a volant common ancestor with Procellariiformes close to the Cretaceous-Paleogene boundary (66 million years ago) and subsequently lost the ability to fly but enhanced their diving capabilities. With ∼20 species among 6 genera, penguins range from the tropical Galápagos Islands to the oceanic temperate forests of New Zealand, the rocky coastlines of the sub-Antarctic islands, and the sea ice around Antarctica. To inhabit such diverse and extreme environments, penguins evolved many physiological and morphological adaptations. However, they are also highly sensitive to climate change. Therefore, penguins provide an exciting target system for understanding the evolutionary processes of speciation, adaptation, and demography. Genomic data are an emerging resource for addressing questions about such processes. Article in Journal/Newspaper Antarc* Antarctic Antarctica Sea ice Archive ouverte HAL (Hyper Article en Ligne, CCSD - Centre pour la Communication Scientifique Directe) Antarctic New Zealand GigaScience 8 9 |