Microsatellite analysis of albacore tuna (Thunnus alalunga): population genetic structure in the Nord-East Atlantic Ocean and Mediterranean sea

Stock heterogeneity was investigated in albacore tuna (Thunnus alalunga, Bonnaterre 1788), a commercially important species in the North Atlantic Ocean and Mediterranean Sea. Twelve polymorphic microsatellite loci were examined in 581 albacore tuna from nine locations, four in the north-east Atlanti...

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Published in:Marine Biology
Main Authors: Davies, C. A., Gosling, E.M., Was, A., Brophy, D., Tysklind, N.
Other Authors: Commercial Fisheries Research Group, Department of Life Sciences, Galway-Mayo Institute of Technology, Molecular Ecology Research Group, Department of Life Sciences, School pf Biological Sciences, Molecular Ecology and Fisheries Genetics Laboratory, Bangor University
Format: Article in Journal/Newspaper
Language:English
Published: HAL CCSD 2011
Subjects:
Online Access:https://hal.archives-ouvertes.fr/hal-02282252
https://hal.archives-ouvertes.fr/hal-02282252/document
https://hal.archives-ouvertes.fr/hal-02282252/file/Davies2011_Article_MicrosatelliteAnalysisOfAlbacoreTuna,%20pop%20structure%20in%20the%20NE%20Atlantic%20and%20Med%20sea%29.pdf
https://doi.org/10.1007/s00227-011-1772-x
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spelling ftccsdartic:oai:HAL:hal-02282252v1 2023-05-15T17:35:03+02:00 Microsatellite analysis of albacore tuna (Thunnus alalunga): population genetic structure in the Nord-East Atlantic Ocean and Mediterranean sea Davies, C. A. Gosling, E.M. Was, A. Brophy, D. Tysklind, N. Commercial Fisheries Research Group, Department of Life Sciences Galway-Mayo Institute of Technology Molecular Ecology Research Group, Department of Life Sciences School pf Biological Sciences, Molecular Ecology and Fisheries Genetics Laboratory Bangor University 2011 https://hal.archives-ouvertes.fr/hal-02282252 https://hal.archives-ouvertes.fr/hal-02282252/document https://hal.archives-ouvertes.fr/hal-02282252/file/Davies2011_Article_MicrosatelliteAnalysisOfAlbacoreTuna,%20pop%20structure%20in%20the%20NE%20Atlantic%20and%20Med%20sea%29.pdf https://doi.org/10.1007/s00227-011-1772-x en eng HAL CCSD Springer Verlag info:eu-repo/semantics/altIdentifier/doi/10.1007/s00227-011-1772-x hal-02282252 https://hal.archives-ouvertes.fr/hal-02282252 https://hal.archives-ouvertes.fr/hal-02282252/document https://hal.archives-ouvertes.fr/hal-02282252/file/Davies2011_Article_MicrosatelliteAnalysisOfAlbacoreTuna,%20pop%20structure%20in%20the%20NE%20Atlantic%20and%20Med%20sea%29.pdf doi:10.1007/s00227-011-1772-x PRODINRA: 474719 info:eu-repo/semantics/OpenAccess ISSN: 0025-3162 EISSN: 1432-1793 Marine Biology https://hal.archives-ouvertes.fr/hal-02282252 Marine Biology, Springer Verlag, 2011, 158, pp.2727-2740. ⟨10.1007/s00227-011-1772-x⟩ [SDV]Life Sciences [q-bio] info:eu-repo/semantics/article Journal articles 2011 ftccsdartic https://doi.org/10.1007/s00227-011-1772-x 2022-01-30T01:19:13Z Stock heterogeneity was investigated in albacore tuna (Thunnus alalunga, Bonnaterre 1788), a commercially important species in the North Atlantic Ocean and Mediterranean Sea. Twelve polymorphic microsatellite loci were examined in 581 albacore tuna from nine locations, four in the north-east Atlantic Ocean (NEA), three in the Mediterranean Sea (MED) and two in the south-western Pacific Ocean (SWP). Maximum numbers of alleles per locus ranged from 9 to 38 (sample mean, 5.2-22.6 per locus; overall mean, 14.2 +/- 0.47 SE), and observed heterozygosities per locus ranged from 0.44 to 1.00 (overall mean: 0.79 +/- 0.19 SE). Significant deficits of heterozygotes were observed in 20% of tests. Multilocus F-ST values were observed ranging from 0.00 to Theta = 0.036 and Theta' = 0.253, with a mean of Theta = 0.013 and Theta' = 0.079. Pairwise F-ST values showed that the SWP, NEA and MED stocks were significantly distinct from one another, thus corroborating findings in previous studies based on mitochondrial DNA, nuclear DNA (other than microsatellites) and allozyme analyses. Heterogeneity was observed for the first time between samples within the Mediterranean Sea. GENELAND indicated the potential presence of three populations across the NEA and two separate populations in the Mediterranean Sea. Observed genetic structure may be related to migration patterns and timing of movements of subpopulations to the feeding grounds in either summer or autumn. We suggest that a more intensive survey be conducted throughout the entire fishing season to ratify or refute the currently accepted genetic homogeneity within the NEA albacore stock. Article in Journal/Newspaper North Atlantic North East Atlantic Archive ouverte HAL (Hyper Article en Ligne, CCSD - Centre pour la Communication Scientifique Directe) Pacific Marine Biology 158 12 2727 2740
institution Open Polar
collection Archive ouverte HAL (Hyper Article en Ligne, CCSD - Centre pour la Communication Scientifique Directe)
op_collection_id ftccsdartic
language English
topic [SDV]Life Sciences [q-bio]
spellingShingle [SDV]Life Sciences [q-bio]
Davies, C. A.
Gosling, E.M.
Was, A.
Brophy, D.
Tysklind, N.
Microsatellite analysis of albacore tuna (Thunnus alalunga): population genetic structure in the Nord-East Atlantic Ocean and Mediterranean sea
topic_facet [SDV]Life Sciences [q-bio]
description Stock heterogeneity was investigated in albacore tuna (Thunnus alalunga, Bonnaterre 1788), a commercially important species in the North Atlantic Ocean and Mediterranean Sea. Twelve polymorphic microsatellite loci were examined in 581 albacore tuna from nine locations, four in the north-east Atlantic Ocean (NEA), three in the Mediterranean Sea (MED) and two in the south-western Pacific Ocean (SWP). Maximum numbers of alleles per locus ranged from 9 to 38 (sample mean, 5.2-22.6 per locus; overall mean, 14.2 +/- 0.47 SE), and observed heterozygosities per locus ranged from 0.44 to 1.00 (overall mean: 0.79 +/- 0.19 SE). Significant deficits of heterozygotes were observed in 20% of tests. Multilocus F-ST values were observed ranging from 0.00 to Theta = 0.036 and Theta' = 0.253, with a mean of Theta = 0.013 and Theta' = 0.079. Pairwise F-ST values showed that the SWP, NEA and MED stocks were significantly distinct from one another, thus corroborating findings in previous studies based on mitochondrial DNA, nuclear DNA (other than microsatellites) and allozyme analyses. Heterogeneity was observed for the first time between samples within the Mediterranean Sea. GENELAND indicated the potential presence of three populations across the NEA and two separate populations in the Mediterranean Sea. Observed genetic structure may be related to migration patterns and timing of movements of subpopulations to the feeding grounds in either summer or autumn. We suggest that a more intensive survey be conducted throughout the entire fishing season to ratify or refute the currently accepted genetic homogeneity within the NEA albacore stock.
author2 Commercial Fisheries Research Group, Department of Life Sciences
Galway-Mayo Institute of Technology
Molecular Ecology Research Group, Department of Life Sciences
School pf Biological Sciences, Molecular Ecology and Fisheries Genetics Laboratory
Bangor University
format Article in Journal/Newspaper
author Davies, C. A.
Gosling, E.M.
Was, A.
Brophy, D.
Tysklind, N.
author_facet Davies, C. A.
Gosling, E.M.
Was, A.
Brophy, D.
Tysklind, N.
author_sort Davies, C. A.
title Microsatellite analysis of albacore tuna (Thunnus alalunga): population genetic structure in the Nord-East Atlantic Ocean and Mediterranean sea
title_short Microsatellite analysis of albacore tuna (Thunnus alalunga): population genetic structure in the Nord-East Atlantic Ocean and Mediterranean sea
title_full Microsatellite analysis of albacore tuna (Thunnus alalunga): population genetic structure in the Nord-East Atlantic Ocean and Mediterranean sea
title_fullStr Microsatellite analysis of albacore tuna (Thunnus alalunga): population genetic structure in the Nord-East Atlantic Ocean and Mediterranean sea
title_full_unstemmed Microsatellite analysis of albacore tuna (Thunnus alalunga): population genetic structure in the Nord-East Atlantic Ocean and Mediterranean sea
title_sort microsatellite analysis of albacore tuna (thunnus alalunga): population genetic structure in the nord-east atlantic ocean and mediterranean sea
publisher HAL CCSD
publishDate 2011
url https://hal.archives-ouvertes.fr/hal-02282252
https://hal.archives-ouvertes.fr/hal-02282252/document
https://hal.archives-ouvertes.fr/hal-02282252/file/Davies2011_Article_MicrosatelliteAnalysisOfAlbacoreTuna,%20pop%20structure%20in%20the%20NE%20Atlantic%20and%20Med%20sea%29.pdf
https://doi.org/10.1007/s00227-011-1772-x
geographic Pacific
geographic_facet Pacific
genre North Atlantic
North East Atlantic
genre_facet North Atlantic
North East Atlantic
op_source ISSN: 0025-3162
EISSN: 1432-1793
Marine Biology
https://hal.archives-ouvertes.fr/hal-02282252
Marine Biology, Springer Verlag, 2011, 158, pp.2727-2740. ⟨10.1007/s00227-011-1772-x⟩
op_relation info:eu-repo/semantics/altIdentifier/doi/10.1007/s00227-011-1772-x
hal-02282252
https://hal.archives-ouvertes.fr/hal-02282252
https://hal.archives-ouvertes.fr/hal-02282252/document
https://hal.archives-ouvertes.fr/hal-02282252/file/Davies2011_Article_MicrosatelliteAnalysisOfAlbacoreTuna,%20pop%20structure%20in%20the%20NE%20Atlantic%20and%20Med%20sea%29.pdf
doi:10.1007/s00227-011-1772-x
PRODINRA: 474719
op_rights info:eu-repo/semantics/OpenAccess
op_doi https://doi.org/10.1007/s00227-011-1772-x
container_title Marine Biology
container_volume 158
container_issue 12
container_start_page 2727
op_container_end_page 2740
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