Genetic structure and demographic inference of the regular sea urchin Sterechinus neumayeri (Meissner, 1900) in the Southern Ocean: the role of the last glaciation
22 pages International audience One of the most relevant characteristics of the extant Southern Ocean fauna is its resiliency to survive glacial processes of the Quaternary. These climatic events produced catastrophic habitat reductions and forced some marine benthic species to move, adapt or go ext...
Published in: | PLOS ONE |
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Main Authors: | , , , , , , , |
Other Authors: | , , , , , , , , , , , , , |
Format: | Article in Journal/Newspaper |
Language: | English |
Published: |
HAL CCSD
2018
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Subjects: | |
Online Access: | https://hal.archives-ouvertes.fr/hal-01821689 https://hal.archives-ouvertes.fr/hal-01821689/document https://hal.archives-ouvertes.fr/hal-01821689/file/journal.pone.0197611.pdf https://doi.org/10.1371/journal.pone.0197611 |
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Open Polar |
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Archive ouverte HAL (Hyper Article en Ligne, CCSD - Centre pour la Communication Scientifique Directe) |
op_collection_id |
ftccsdartic |
language |
English |
topic |
Antarctica Haplotypes Phylogeography Population genetics Genetic loci Islands Species diversity Antarctic Ocean [SDV.GEN.GPO]Life Sciences [q-bio]/Genetics/Populations and Evolution [q-bio.PE] |
spellingShingle |
Antarctica Haplotypes Phylogeography Population genetics Genetic loci Islands Species diversity Antarctic Ocean [SDV.GEN.GPO]Life Sciences [q-bio]/Genetics/Populations and Evolution [q-bio.PE] Díaz, Angie Gérard, Karin González-Wevar, Claudio Maturana, Claudia Feral, Jean-Pierre DAVID, Bruno Saucède, Thomas Poulin, Elie Genetic structure and demographic inference of the regular sea urchin Sterechinus neumayeri (Meissner, 1900) in the Southern Ocean: the role of the last glaciation |
topic_facet |
Antarctica Haplotypes Phylogeography Population genetics Genetic loci Islands Species diversity Antarctic Ocean [SDV.GEN.GPO]Life Sciences [q-bio]/Genetics/Populations and Evolution [q-bio.PE] |
description |
22 pages International audience One of the most relevant characteristics of the extant Southern Ocean fauna is its resiliency to survive glacial processes of the Quaternary. These climatic events produced catastrophic habitat reductions and forced some marine benthic species to move, adapt or go extinct. The marine benthic species inhabiting the Antarctic upper continental shelf faced the Quaternary glaciations with different strategies that drastically modified population sizes and thus affected the amount and distribution of intraspecific genetic variation. Here we present new genetic information for the most conspicuous regular sea urchin of the Antarctic continental shelf, Sterechinus neumayeri. We studied the patterns of genetic diversity and structure in this broadcast-spawner across three Antarctic regions: Antarctic Peninsula, the Weddell Sea and Adélie Land in East Antarctica. Genetic analyses based on mitochondrial and nuclear markers suggested that S. neumayeri is a single genetic unit around the Antarctic continent. The species is characterized by low levels of genetic diversity and exhibits a typical star-like haplotype genealogy that supports the hypothesis of a single in situ refugium. Based on two mutation rates standardized for this genus, the Bayesian Skyline plot analyses detected a rapid demographic expansion after the Last Glacial Maximum. We propose a scenario of rapid postglacial expansion and recolonization of Antarctic shallow areas from a less ice-impacted refugium where the species survived the LGM. Considering the patterns of genetic diversity and structure recorded in the species, this refugium was probably located in East Antarctica. |
author2 |
Departamento de Zoología Universidad de Concepción Chile Facultad de Ciencias Universidad de Magallanes (UMAG) Laboratorio de Ecología Molecular Antártica y Subantártica Instituto de Ciencias Marinas y Limnológicas Universidad Austral de Chile Instituto de Ecología y Biodiversidad (IEB) Institut méditerranéen de biodiversité et d'écologie marine et continentale (IMBE) Avignon Université (AU)-Aix Marseille Université (AMU)-Institut de recherche pour le développement IRD : UMR237-Centre National de la Recherche Scientifique (CNRS) Biogéosciences UMR 6282 Dijon (BGS) Centre National de la Recherche Scientifique (CNRS)-Université de Bourgogne (UB)-AgroSup Dijon - Institut National Supérieur des Sciences Agronomiques, de l'Alimentation et de l'Environnement Muséum national d'Histoire naturelle (MNHN) Study funded by different projects and institutions including INACH D 05–09 and Conicyt Ph.D. Grant (D-21080136). |
format |
Article in Journal/Newspaper |
author |
Díaz, Angie Gérard, Karin González-Wevar, Claudio Maturana, Claudia Feral, Jean-Pierre DAVID, Bruno Saucède, Thomas Poulin, Elie |
author_facet |
Díaz, Angie Gérard, Karin González-Wevar, Claudio Maturana, Claudia Feral, Jean-Pierre DAVID, Bruno Saucède, Thomas Poulin, Elie |
author_sort |
Díaz, Angie |
title |
Genetic structure and demographic inference of the regular sea urchin Sterechinus neumayeri (Meissner, 1900) in the Southern Ocean: the role of the last glaciation |
title_short |
Genetic structure and demographic inference of the regular sea urchin Sterechinus neumayeri (Meissner, 1900) in the Southern Ocean: the role of the last glaciation |
title_full |
Genetic structure and demographic inference of the regular sea urchin Sterechinus neumayeri (Meissner, 1900) in the Southern Ocean: the role of the last glaciation |
title_fullStr |
Genetic structure and demographic inference of the regular sea urchin Sterechinus neumayeri (Meissner, 1900) in the Southern Ocean: the role of the last glaciation |
title_full_unstemmed |
Genetic structure and demographic inference of the regular sea urchin Sterechinus neumayeri (Meissner, 1900) in the Southern Ocean: the role of the last glaciation |
title_sort |
genetic structure and demographic inference of the regular sea urchin sterechinus neumayeri (meissner, 1900) in the southern ocean: the role of the last glaciation |
publisher |
HAL CCSD |
publishDate |
2018 |
url |
https://hal.archives-ouvertes.fr/hal-01821689 https://hal.archives-ouvertes.fr/hal-01821689/document https://hal.archives-ouvertes.fr/hal-01821689/file/journal.pone.0197611.pdf https://doi.org/10.1371/journal.pone.0197611 |
geographic |
Antarctic Antarctic Ocean Antarctic Peninsula East Antarctica Southern Ocean The Antarctic Weddell Weddell Sea |
geographic_facet |
Antarctic Antarctic Ocean Antarctic Peninsula East Antarctica Southern Ocean The Antarctic Weddell Weddell Sea |
genre |
Antarc* Antarctic Antarctic Ocean Antarctic Peninsula Antarctica East Antarctica Southern Ocean Weddell Sea |
genre_facet |
Antarc* Antarctic Antarctic Ocean Antarctic Peninsula Antarctica East Antarctica Southern Ocean Weddell Sea |
op_source |
ISSN: 1932-6203 EISSN: 1932-6203 PLoS ONE https://hal.archives-ouvertes.fr/hal-01821689 PLoS ONE, Public Library of Science, 2018, 13 (6), pp.e0197611. ⟨10.1371/journal.pone.0197611⟩ http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0197611 |
op_relation |
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op_rights |
http://creativecommons.org/licenses/by/ info:eu-repo/semantics/OpenAccess |
op_doi |
https://doi.org/10.1371/journal.pone.0197611 |
container_title |
PLOS ONE |
container_volume |
13 |
container_issue |
6 |
container_start_page |
e0197611 |
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spelling |
ftccsdartic:oai:HAL:hal-01821689v1 2023-05-15T13:37:22+02:00 Genetic structure and demographic inference of the regular sea urchin Sterechinus neumayeri (Meissner, 1900) in the Southern Ocean: the role of the last glaciation Díaz, Angie Gérard, Karin González-Wevar, Claudio Maturana, Claudia Feral, Jean-Pierre DAVID, Bruno Saucède, Thomas Poulin, Elie Departamento de Zoología Universidad de Concepción Chile Facultad de Ciencias Universidad de Magallanes (UMAG) Laboratorio de Ecología Molecular Antártica y Subantártica Instituto de Ciencias Marinas y Limnológicas Universidad Austral de Chile Instituto de Ecología y Biodiversidad (IEB) Institut méditerranéen de biodiversité et d'écologie marine et continentale (IMBE) Avignon Université (AU)-Aix Marseille Université (AMU)-Institut de recherche pour le développement IRD : UMR237-Centre National de la Recherche Scientifique (CNRS) Biogéosciences UMR 6282 Dijon (BGS) Centre National de la Recherche Scientifique (CNRS)-Université de Bourgogne (UB)-AgroSup Dijon - Institut National Supérieur des Sciences Agronomiques, de l'Alimentation et de l'Environnement Muséum national d'Histoire naturelle (MNHN) Study funded by different projects and institutions including INACH D 05–09 and Conicyt Ph.D. Grant (D-21080136). 2018-06-06 https://hal.archives-ouvertes.fr/hal-01821689 https://hal.archives-ouvertes.fr/hal-01821689/document https://hal.archives-ouvertes.fr/hal-01821689/file/journal.pone.0197611.pdf https://doi.org/10.1371/journal.pone.0197611 en eng HAL CCSD Public Library of Science info:eu-repo/semantics/altIdentifier/doi/10.1371/journal.pone.0197611 info:eu-repo/semantics/altIdentifier/pmid/29874287 hal-01821689 https://hal.archives-ouvertes.fr/hal-01821689 https://hal.archives-ouvertes.fr/hal-01821689/document https://hal.archives-ouvertes.fr/hal-01821689/file/journal.pone.0197611.pdf doi:10.1371/journal.pone.0197611 PUBMED: 29874287 PUBMEDCENTRAL: PMC5991379 http://creativecommons.org/licenses/by/ info:eu-repo/semantics/OpenAccess ISSN: 1932-6203 EISSN: 1932-6203 PLoS ONE https://hal.archives-ouvertes.fr/hal-01821689 PLoS ONE, Public Library of Science, 2018, 13 (6), pp.e0197611. ⟨10.1371/journal.pone.0197611⟩ http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0197611 Antarctica Haplotypes Phylogeography Population genetics Genetic loci Islands Species diversity Antarctic Ocean [SDV.GEN.GPO]Life Sciences [q-bio]/Genetics/Populations and Evolution [q-bio.PE] info:eu-repo/semantics/article Journal articles 2018 ftccsdartic https://doi.org/10.1371/journal.pone.0197611 2021-11-21T01:51:47Z 22 pages International audience One of the most relevant characteristics of the extant Southern Ocean fauna is its resiliency to survive glacial processes of the Quaternary. These climatic events produced catastrophic habitat reductions and forced some marine benthic species to move, adapt or go extinct. The marine benthic species inhabiting the Antarctic upper continental shelf faced the Quaternary glaciations with different strategies that drastically modified population sizes and thus affected the amount and distribution of intraspecific genetic variation. Here we present new genetic information for the most conspicuous regular sea urchin of the Antarctic continental shelf, Sterechinus neumayeri. We studied the patterns of genetic diversity and structure in this broadcast-spawner across three Antarctic regions: Antarctic Peninsula, the Weddell Sea and Adélie Land in East Antarctica. Genetic analyses based on mitochondrial and nuclear markers suggested that S. neumayeri is a single genetic unit around the Antarctic continent. The species is characterized by low levels of genetic diversity and exhibits a typical star-like haplotype genealogy that supports the hypothesis of a single in situ refugium. Based on two mutation rates standardized for this genus, the Bayesian Skyline plot analyses detected a rapid demographic expansion after the Last Glacial Maximum. We propose a scenario of rapid postglacial expansion and recolonization of Antarctic shallow areas from a less ice-impacted refugium where the species survived the LGM. Considering the patterns of genetic diversity and structure recorded in the species, this refugium was probably located in East Antarctica. Article in Journal/Newspaper Antarc* Antarctic Antarctic Ocean Antarctic Peninsula Antarctica East Antarctica Southern Ocean Weddell Sea Archive ouverte HAL (Hyper Article en Ligne, CCSD - Centre pour la Communication Scientifique Directe) Antarctic Antarctic Ocean Antarctic Peninsula East Antarctica Southern Ocean The Antarctic Weddell Weddell Sea PLOS ONE 13 6 e0197611 |